Search of human proteins with 6912540

Search of human proteins with 6912540

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912540 nucleotide binding protein 2 (MinD homolog, E. coli)
[Homo sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912540 nucleotide binding protein 2 (MinD homolog, E. coli) ...   546   e-156
gi|118572611 nucleotide binding protein 1 [Homo sapiens]              276   1e-74
gi|157384956 nucleotide binding protein-like [Homo sapiens]           172   4e-43
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap...    31   1.0  
gi|50428938 arsA arsenite transporter, ATP-binding, homolog 1 [H...    31   1.0  
gi|239755536 PREDICTED: hypothetical protein [Homo sapiens]            28   6.5  
gi|239749998 PREDICTED: hypothetical protein XP_002347249 [Homo ...    28   6.5  
gi|239744309 PREDICTED: hypothetical protein XP_002343114 [Homo ...    28   6.5  
gi|91206396 taste receptor, type 1, member 3 [Homo sapiens]            28   6.5  
gi|169214102 PREDICTED: similar to hCG92381 [Homo sapiens]             28   8.5  
gi|169214479 PREDICTED: similar to hCG92381 [Homo sapiens]             28   8.5  
gi|169213433 PREDICTED: hypothetical protein LOC646698 [Homo sap...    28   8.5  
gi|4506533 Ras-like without CAAX 2 [Homo sapiens]                      28   8.5  

>gi|6912540 nucleotide binding protein 2 (MinD homolog, E. coli)
           [Homo sapiens]
          Length = 271

 Score =  546 bits (1407), Expect = e-156
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MEAAAEPGNLAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPR 60
           MEAAAEPGNLAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPR
Sbjct: 1   MEAAAEPGNLAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPR 60

Query: 61  MLGAQGRAVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSD 120
           MLGAQGRAVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSD
Sbjct: 61  MLGAQGRAVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSD 120

Query: 121 VAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKT 180
           VAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKT
Sbjct: 121 VAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKT 180

Query: 181 GLRVMGIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGH 240
           GLRVMGIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGH
Sbjct: 181 GLRVMGIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGH 240

Query: 241 DFIQEFPGSPAFAALTSIAQKILDATPACLP 271
           DFIQEFPGSPAFAALTSIAQKILDATPACLP
Sbjct: 241 DFIQEFPGSPAFAALTSIAQKILDATPACLP 271


>gi|118572611 nucleotide binding protein 1 [Homo sapiens]
          Length = 320

 Score =  276 bits (707), Expect = 1e-74
 Identities = 134/253 (52%), Positives = 179/253 (70%), Gaps = 5/253 (1%)

Query: 13  VRHIILVLSGKGGVGKSTISTELALALRH-AGKKVGILDVDLCGPSIPRMLGAQGRAVHQ 71
           V+H ILVLSGKGGVGKST S  LA  L      ++ +LD+D+CGPSIP+++G +G  VHQ
Sbjct: 53  VKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQIALLDIDICGPSIPKIMGLEGEQVHQ 112

Query: 72  CDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELDYLVV 131
              GW+PV++  E ++ +MSVGFLL  PD+AV+WRGPKKN +IKQF+ DV WGE+DYL+V
Sbjct: 113 SGSGWSPVYV--EDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170

Query: 132 DTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKTGLRVMGIVENM 191
           DTPPGTSDEH++ +  L      GA+++TTPQ VS+ DVR+E+ FCRK  L ++G+VENM
Sbjct: 171 DTPPGTSDEHLSVVRYLATAHIDGAVIITTPQEVSLQDVRKEINFCRKVKLPIIGVVENM 230

Query: 192 SGFTCPHCTECTSVF--SRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEFPGS 249
           SGF CP C + + +F  + GG E + Q   VP LG VPLDP + +  ++G  F  + P S
Sbjct: 231 SGFICPKCKKESQIFPPTTGGAELMCQDLEVPLLGRVPLDPLIGKNCDKGQSFFIDAPDS 290

Query: 250 PAFAALTSIAQKI 262
           PA  A  SI Q+I
Sbjct: 291 PATLAYRSIIQRI 303


>gi|157384956 nucleotide binding protein-like [Homo sapiens]
          Length = 319

 Score =  172 bits (435), Expect = 4e-43
 Identities = 98/262 (37%), Positives = 149/262 (56%), Gaps = 11/262 (4%)

Query: 10  LAGVRHIILVLSGKGGVGKSTISTELALAL--RHAGKKVGILDVDLCGPSIPRMLGAQGR 67
           + GV+ +I+V SGKGGVGKST +  LALAL    + K +G+LDVD+ GPS+P+M+  +G 
Sbjct: 63  IEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLKGN 122

Query: 68  AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127
                     P+       I+ MS+GFL+E+  E VVWRG    + I++ +  V WG+LD
Sbjct: 123 PELSQSNLMRPLL---NYGIACMSMGFLVEE-SEPVVWRGLMVMSAIEKLLRQVDWGQLD 178

Query: 128 YLVVDTPPGTSDEHMATIEALRPYQPL-GALVVTTPQAVSVGDVRRELTFCRKTGLRVMG 186
           YLVVD PPGT D  ++  + +    P+ GA++V+TPQ +++ D  +     R+  + V+G
Sbjct: 179 YLVVDMPPGTGDVQLSVSQNI----PITGAVIVSTPQDIALMDAHKGAEMFRRVHVPVLG 234

Query: 187 IVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEF 246
           +V+NMS F CP C   T +F   G  +LAQ  G+  LG +PL   +    + G   +   
Sbjct: 235 LVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQ 294

Query: 247 PGSPAFAALTSIAQKILDATPA 268
           P S    A   IA +++   P+
Sbjct: 295 PESDEAKAYLRIAVEVVRRLPS 316


>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
           sapiens]
          Length = 1038

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 22/152 (14%)

Query: 123 WG---ELDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRK 179
           WG    +D L +  P    D     +   RP Q LG +   T   VS         F ++
Sbjct: 476 WGFPDRIDELYLGNPMDPPDLLSVELSTSRPPQHLGGVKKPTYDPVSEDQDPLSSDF-KR 534

Query: 180 TGLRVMGIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEG 239
            GLR  G+   +     P      +  SRG G E+  +      G  P+ PAL       
Sbjct: 535 LGLRKPGLPRGL-WLAKPSARVPGTKASRGSGAEVTLID----FGEEPVVPALR------ 583

Query: 240 HDFIQEFPGSPAFAALTSIAQKILDATPACLP 271
                  P +P+ A L   A  +LD TP   P
Sbjct: 584 -------PCAPSLAQLAMDACSLLDETPPQSP 608


>gi|50428938 arsA arsenite transporter, ATP-binding, homolog 1
          [Homo sapiens]
          Length = 348

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 18 LVLSGKGGVGKSTISTELALALRHAGKKVGILDVD 52
          + + GKGGVGK+T S  LA+ L    + V I+  D
Sbjct: 40 IFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTD 74


>gi|239755536 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 34  ELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVHQCDR-----------GWAPVFLD 82
           ELAL L     +VG+   DL  PSI  +    G  + Q +            G APV   
Sbjct: 54  ELALQLSEGFVRVGVGIPDLHAPSILHLAAQHGELLPQGEAQQAANLAPLPLGAAPVVTH 113

Query: 83  REQSISLMSVGFLLEKP 99
            E+ ++L+ V  LL  P
Sbjct: 114 PEEQLALLGVIVLLIVP 130


>gi|239749998 PREDICTED: hypothetical protein XP_002347249 [Homo
           sapiens]
          Length = 219

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 34  ELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVHQCDR-----------GWAPVFLD 82
           ELAL L     +VG+   DL  PSI  +    G  + Q +            G APV   
Sbjct: 54  ELALQLSEGFVRVGVGIPDLHAPSILHLAAQHGELLPQGEAQQAANLAPLPLGAAPVVTH 113

Query: 83  REQSISLMSVGFLLEKP 99
            E+ ++L+ V  LL  P
Sbjct: 114 PEEQLALLGVIVLLIVP 130


>gi|239744309 PREDICTED: hypothetical protein XP_002343114 [Homo
           sapiens]
          Length = 219

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 34  ELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVHQCDR-----------GWAPVFLD 82
           ELAL L     +VG+   DL  PSI  +    G  + Q +            G APV   
Sbjct: 54  ELALQLSEGFVRVGVGIPDLHAPSILHLAAQHGELLPQGEAQQAANLAPLPLGAAPVVTH 113

Query: 83  REQSISLMSVGFLLEKP 99
            E+ ++L+ V  LL  P
Sbjct: 114 PEEQLALLGVIVLLIVP 130


>gi|91206396 taste receptor, type 1, member 3 [Homo sapiens]
          Length = 852

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 115 KQFVSDVAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVG-DVRRE 173
           K +V+  AW   D LV+  P       MA +  +  +   GA +   PQ V     +  +
Sbjct: 295 KVWVASEAWLTSD-LVMGLPG------MAQMGTVLGFLQRGAQLHEFPQYVKTHLALATD 347

Query: 174 LTFCRKTGLRVMGIVENMSGFTCPHCTECTSVFSRGGG 211
             FC   G R  G+ E++ G  CP C +C ++ +   G
Sbjct: 348 PAFCSALGEREQGLEEDVVGQRCPQC-DCITLQNVSAG 384


>gi|169214102 PREDICTED: similar to hCG92381 [Homo sapiens]
          Length = 497

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 106 RGPKK----NALIKQFV---SDVAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALV 158
           R PKK    N L K+++   SDV   E+   V D P G S +  +++  +RP +   +  
Sbjct: 120 RRPKKWSVVNFLGKEYLMQESDVEMAEIPASVRDDPRGVSSQRASSVNEMRPGEGQASQE 179

Query: 159 VTTPQAVSVGDVRRELTF 176
           + T   V     R+E  F
Sbjct: 180 LQTLPRVPALSRRQEEDF 197


>gi|169214479 PREDICTED: similar to hCG92381 [Homo sapiens]
          Length = 497

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 106 RGPKK----NALIKQFV---SDVAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALV 158
           R PKK    N L K+++   SDV   E+   V D P G S +  +++  +RP +   +  
Sbjct: 120 RRPKKWSVVNFLGKEYLMQESDVEMAEIPASVRDDPRGVSSQRASSVNEMRPGEGQASQE 179

Query: 159 VTTPQAVSVGDVRRELTF 176
           + T   V     R+E  F
Sbjct: 180 LQTLPRVPALSRRQEEDF 197


>gi|169213433 PREDICTED: hypothetical protein LOC646698 [Homo
           sapiens]
          Length = 497

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 106 RGPKK----NALIKQFV---SDVAWGELDYLVVDTPPGTSDEHMATIEALRPYQPLGALV 158
           R PKK    N L K+++   SDV   E+   V D P G S +  +++  +RP +   +  
Sbjct: 120 RRPKKWSVVNFLGKEYLMQESDVEMAEIPASVRDDPRGVSSQRASSVNEMRPGEGQASQE 179

Query: 159 VTTPQAVSVGDVRRELTF 176
           + T   V     R+E  F
Sbjct: 180 LQTLPRVPALSRRQEEDF 197


>gi|4506533 Ras-like without CAAX 2 [Homo sapiens]
          Length = 217

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 2  EAAAEPGNLAG-VRHIILVLSGKGGVGKSTISTE 34
          EA+  PG+ +G  R   +V+ G GGVGKS ++ +
Sbjct: 6  EASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQ 39


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,033,634
Number of Sequences: 37866
Number of extensions: 494044
Number of successful extensions: 1106
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1094
Number of HSP's gapped (non-prelim): 14
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.