Guide to the Human Genome
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Search of human proteins with 57242798

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57242798 acid sphingomyelinase-like phosphodiesterase 3B
isoform 1 [Homo sapiens]
         (455 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57242798 acid sphingomyelinase-like phosphodiesterase 3B isof...   953   0.0  
gi|57242800 acid sphingomyelinase-like phosphodiesterase 3B isof...   710   0.0  
gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Hom...   357   9e-99
gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal is...   194   2e-49
gi|56117842 sphingomyelin phosphodiesterase 1, acid lysosomal is...   152   6e-37
gi|153251270 calcineurin-like phosphoesterase domain containing ...    31   2.0  
gi|219842266 usherin isoform B [Homo sapiens]                          30   4.5  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    30   4.5  
gi|39812027 amino-terminal enhancer of split isoform c [Homo sap...    30   5.9  
gi|39812019 amino-terminal enhancer of split isoform a [Homo sap...    30   5.9  
gi|5706731 amino-terminal enhancer of split isoform b [Homo sapi...    30   5.9  

>gi|57242798 acid sphingomyelinase-like phosphodiesterase 3B isoform
           1 [Homo sapiens]
          Length = 455

 Score =  953 bits (2464), Expect = 0.0
 Identities = 455/455 (100%), Positives = 455/455 (100%)

Query: 1   MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG 60
           MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG
Sbjct: 1   MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG 60

Query: 61  DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR 120
           DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR
Sbjct: 61  DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR 120

Query: 121 EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL 180
           EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL
Sbjct: 121 EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL 180

Query: 181 PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG 240
           PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG
Sbjct: 181 PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG 240

Query: 241 FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT 300
           FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT
Sbjct: 241 FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT 300

Query: 301 PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQ 360
           PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQ
Sbjct: 301 PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQ 360

Query: 361 LTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYVYNSVSYSAGVCDEACSMQHVCAMRQV 420
           LTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYVYNSVSYSAGVCDEACSMQHVCAMRQV
Sbjct: 361 LTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYVYNSVSYSAGVCDEACSMQHVCAMRQV 420

Query: 421 DIDAYTTCLYASGTTPVPQLPLLLMALLGLCTLVL 455
           DIDAYTTCLYASGTTPVPQLPLLLMALLGLCTLVL
Sbjct: 421 DIDAYTTCLYASGTTPVPQLPLLLMALLGLCTLVL 455


>gi|57242800 acid sphingomyelinase-like phosphodiesterase 3B isoform
           2 [Homo sapiens]
          Length = 373

 Score =  710 bits (1832), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG 60
           MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG
Sbjct: 1   MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWG 60

Query: 61  DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR 120
           DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR
Sbjct: 61  DYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIR 120

Query: 121 EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL 180
           EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL
Sbjct: 121 EVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKL 180

Query: 181 PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG 240
           PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG
Sbjct: 181 PGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPG 240

Query: 241 FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT 300
           FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT
Sbjct: 241 FFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFIT 300

Query: 301 PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLK 335
           PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLK
Sbjct: 301 PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLK 335


>gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Homo
           sapiens]
          Length = 453

 Score =  357 bits (917), Expect = 9e-99
 Identities = 172/420 (40%), Positives = 253/420 (60%), Gaps = 8/420 (1%)

Query: 14  GGARAEP--GKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWGDYLCDSPWALI 71
           GG    P  G+FWH+ DLHLDP Y ++ D  +VC S+      + GP+GD LCDSP+ LI
Sbjct: 29  GGRNPPPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLI 88

Query: 72  NSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIREVFPDTKVYAA 131
            S+   +K    E  F++WTGD  PHVP  +L    V+ ++  +T  I+ +FP+ +V+ A
Sbjct: 89  LSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPA 148

Query: 132 LGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKLPGPSGAGRIVV 191
           LGNHD+ P++Q P  ++ +YN +A LWKPWL  E+I+  +KG FY +K+       RI+ 
Sbjct: 149 LGNHDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNL-RIIS 207

Query: 192 LNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKAWF 251
           LNTNLYY  N +T +  DP  QF+WLE  L ++ +  + VYI+ HVP G+   +QN    
Sbjct: 208 LNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAM 267

Query: 252 REGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFITPGVTPWKTTLP 311
           RE +NEK + + +K+  VIAGQF+GH H DS  +L D  G P++++F+ P VTP K+ L 
Sbjct: 268 REYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLE 327

Query: 312 GVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQLTEAYGVPDAS 371
                 NNP IR+F+YD     L DM+ Y++NL++AN +G   W+LEY LT+ Y + D  
Sbjct: 328 ---KQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQ 384

Query: 372 AHSMHTVLDRIA-GDQSTLQRYYVYNSVSYSAGV-CDEACSMQHVCAMRQVDIDAYTTCL 429
             S++ +  +    D     +YY Y  VSY + V CD+ C    +CA+  +D  +Y  CL
Sbjct: 385 PESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCL 444


>gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal
           isoform 1 precursor [Homo sapiens]
          Length = 631

 Score =  194 bits (492), Expect = 2e-49
 Identities = 135/440 (30%), Positives = 202/440 (45%), Gaps = 49/440 (11%)

Query: 26  IADLHLDPDYKVSKDPFQVCP-----SAGSQPV--PDAGPWGDYL-CDSPWALINSSIYA 77
           + DLH D DY    DP    P      +G  P   P AG WG+Y  CD P   + S +  
Sbjct: 206 LTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSG 265

Query: 78  MKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIREVFPDTKVYAALGNHDF 137
           +    P  D + WTGD   H    +  +   L  +  +T L+R+      VY A+GNH+ 
Sbjct: 266 LGPAGPF-DMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLGPVPVYPAVGNHES 323

Query: 138 HPKNQFPA-------GSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKLPGPSGAGRIV 190
            P N FP         S  +Y  +A+ W+PWL  E++   + G FY      P    R++
Sbjct: 324 TPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PYPGLRLI 380

Query: 191 VLNTNLYYTSNA-LTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKA 249
            LN N     N  L  +  DP  Q QWL   L  A   GD V+I+GH+PPG   K+    
Sbjct: 381 SLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKS---- 436

Query: 250 WFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGV--PISAMFITPGVTPWK 307
                ++  Y ++V ++   +A QFFGH H D F + YD+  +  P++  F+ P      
Sbjct: 437 -----WSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA---- 487

Query: 308 TTLPGVVNGANNPAIRVFE----YDRATLSLKDMVTYFMNLSQANAQGT-PRWELEYQLT 362
           TT  G+     NP  RV++    Y  ++  + D  TY +NL+QAN  G  P W+L Y+  
Sbjct: 488 TTYIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRAR 542

Query: 363 EAYGVPDASAHSMHTVLDRIAGDQSTLQRY-YVYNSVSYSAGVCDEACSMQHVCAMRQVD 421
           E YG+P+    + H ++ R+ GD    Q + ++Y+     +  C   C +  +CA     
Sbjct: 543 ETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSAR 602

Query: 422 IDAYTTC--LYASGTTPVPQ 439
            D+   C  L   G+ P  Q
Sbjct: 603 ADSPALCRHLMPDGSLPEAQ 622


>gi|56117842 sphingomyelin phosphodiesterase 1, acid lysosomal
           isoform 2 precursor [Homo sapiens]
          Length = 587

 Score =  152 bits (384), Expect = 6e-37
 Identities = 120/439 (27%), Positives = 185/439 (42%), Gaps = 91/439 (20%)

Query: 26  IADLHLDPDYKVSKDPFQVCP-----SAGSQPV--PDAGPWGDYL-CDSPWALINSSIYA 77
           + DLH D DY    DP    P      +G  P   P AG WG+Y  CD P   + S +  
Sbjct: 206 LTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSG 265

Query: 78  MKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIREVFPDTKVYAALGNHDF 137
           +    P  D + WTGD   H    +  +   L  +  +T L+R+      VY A+GNH+ 
Sbjct: 266 LGPAGPF-DMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLGPVPVYPAVGNHES 323

Query: 138 HPKNQFPA-------GSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKLPGPSGAGRIV 190
            P N FP         S  +Y  +A+ W+PWL  E++                       
Sbjct: 324 TPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEAL----------------------- 360

Query: 191 VLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKAW 250
                                +  ++L  V T   K    V+I+GH+PPG   K+ +  W
Sbjct: 361 ---------------------RTLRYLSSVETQEGKR--KVHIIGHIPPGHCLKSWS--W 395

Query: 251 FREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGV--PISAMFITPGVTPWKT 308
                   Y ++V ++   +A QFFGH H D F + YD+  +  P++  F+ P      T
Sbjct: 396 -------NYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA----T 444

Query: 309 TLPGVVNGANNPAIRVFE----YDRATLSLKDMVTYFMNLSQANAQGT-PRWELEYQLTE 363
           T  G+     NP  RV++    Y  ++  + D  TY +NL+QAN  G  P W+L Y+  E
Sbjct: 445 TYIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARE 499

Query: 364 AYGVPDASAHSMHTVLDRIAGDQSTLQRY-YVYNSVSYSAGVCDEACSMQHVCAMRQVDI 422
            YG+P+    + H ++ R+ GD    Q + ++Y+     +  C   C +  +CA      
Sbjct: 500 TYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARA 559

Query: 423 DAYTTC--LYASGTTPVPQ 439
           D+   C  L   G+ P  Q
Sbjct: 560 DSPALCRHLMPDGSLPEAQ 578


>gi|153251270 calcineurin-like phosphoesterase domain containing 1
           isoform a [Homo sapiens]
          Length = 314

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 43/215 (20%), Positives = 80/215 (37%), Gaps = 31/215 (14%)

Query: 70  LINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIREVFPDTKVY 129
           L   ++ A+ ++ P+P F +  GD    +P    G+    E  E L +++R V     + 
Sbjct: 67  LTEQAVQAINKLNPKPKFFVLCGDLIHAMP----GKPWRTEQTEDLKRVLRAVDRAIPLV 122

Query: 130 AALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKLPGPSGAGRI 189
              GNHD         G+      + E  + W  ++  + +  G  +             
Sbjct: 123 LVSGNHDI--------GNTPTAETVEEFCRTW-GDDYFSFWVGGVLF------------- 160

Query: 190 VVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKA 249
           +VLN+  Y   +   +       Q QWL++ L+ A +      IV    P F E      
Sbjct: 161 LVLNSQFYENPSKCPSLKQ---AQDQWLDEQLSIARQRHCQHAIVFQHIPLFLESIDEDD 217

Query: 250 WFREGFNEKYLKVVRKH--HRVIAGQFFGHHHTDS 282
            +    ++   K +     H  +   F GH+H ++
Sbjct: 218 DYYFNLSKSTRKKLADKFIHAGVKVVFSGHYHRNA 252


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 22/116 (18%)

Query: 301  PGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQ 360
            P    W  T P    G   P   V    +A +++             +A G P       
Sbjct: 4722 PSSWTWCRTGPAPPEGLRAPTFHVISSTQAVVNI-------------SAPGKPNG----- 4763

Query: 361  LTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYVYNSVSYSAGVCDEACSMQHVCA 416
            +   Y +  +SAH   TVL      Q TL     +   +YS GV  EAC+  + C+
Sbjct: 4764 IVSLYRLFSSSAHGAETVLSEGMATQQTLHGLQAF--TNYSIGV--EACTCFNCCS 4815


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 16/101 (15%)

Query: 38   SKDPFQVCPSAGSQPVPDAGPWGDYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPH 97
            S D     P+       D     D   DSP +++ +S          P+ IL  G++ P 
Sbjct: 4673 SLDLLAALPTPPHNQTEDVRMESDEDSDSPDSIVPAS---------SPESIL--GEEAPR 4721

Query: 98   VPDEKLG-----EAAVLEIVERLTKLIREVFPDTKVYAALG 133
             P    G     + A+  ++  + +    VFPDTK Y ALG
Sbjct: 4722 FPHLGSGRWEQEDRALSPVIPLIPRASIPVFPDTKPYGALG 4762


>gi|39812027 amino-terminal enhancer of split isoform c [Homo
           sapiens]
          Length = 196

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 360 QLTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYV-YNSVSYSAGV 404
           ++ + + +  A  HS+    D++A ++S +QR+YV Y  +SY   +
Sbjct: 28  RIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNI 73


>gi|39812019 amino-terminal enhancer of split isoform a [Homo
           sapiens]
          Length = 264

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 360 QLTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYV-YNSVSYSAGV 404
           ++ + + +  A  HS+    D++A ++S +QR+YV Y  +SY   +
Sbjct: 95  RIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNI 140


>gi|5706731 amino-terminal enhancer of split isoform b [Homo
           sapiens]
          Length = 197

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 360 QLTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYV-YNSVSYSAGV 404
           ++ + + +  A  HS+    D++A ++S +QR+YV Y  +SY   +
Sbjct: 28  RIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNI 73


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,243,628
Number of Sequences: 37866
Number of extensions: 908628
Number of successful extensions: 1746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1725
Number of HSP's gapped (non-prelim): 13
length of query: 455
length of database: 18,247,518
effective HSP length: 106
effective length of query: 349
effective length of database: 14,233,722
effective search space: 4967568978
effective search space used: 4967568978
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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