Search of human proteins with 55956895

Search of human proteins with 55956895

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]
         (543 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]                  1087   0.0  
gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]                   788   0.0  
gi|42542405 CGI-01 protein isoform 2 [Homo sapiens]                   788   0.0  
gi|153945707 endothelin converting enzyme 2 isoform C [Homo sapi...   109   7e-24
gi|153945761 endothelin converting enzyme 2 isoform A [Homo sapi...   107   3e-23
gi|63253298 spermidine synthase [Homo sapiens]                         47   3e-05
gi|112734863 methyltransferase like 12 [Homo sapiens]                  47   6e-05
gi|58219056 methyltransferase like 10 [Homo sapiens]                   37   0.046
gi|13236559 hypothetical protein LOC79169 [Homo sapiens]               33   0.51 
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             33   0.67 
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             33   0.67 
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             33   0.67 
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]             33   0.67 
gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]              32   1.9  
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    31   2.5  
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    31   2.5  
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    31   2.5  
gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens]               31   2.5  
gi|4758404 FSHD region gene 1 [Homo sapiens]                           30   5.6  
gi|30794488 kinesin family member 27 [Homo sapiens]                    30   5.6  
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        30   7.4  
gi|209969682 coiled-coil domain-containing-like [Homo sapiens]         29   9.6  
gi|32130516 serologically defined colon cancer antigen 1 [Homo s...    29   9.6  
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]           29   9.6  

>gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]
          Length = 543

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 543/543 (100%), Positives = 543/543 (100%)

Query: 1   MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS 60
           MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS
Sbjct: 1   MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS 60

Query: 61  ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD 120
           ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD
Sbjct: 61  ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD 120

Query: 121 KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQGRETEWLFGMDEGRKQLAASAGFRRLITV 180
           KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQGRETEWLFGMDEGRKQLAASAGFRRLITV
Sbjct: 121 KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQGRETEWLFGMDEGRKQLAASAGFRRLITV 180

Query: 181 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 240
           ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG
Sbjct: 181 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 240

Query: 241 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 300
           DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL
Sbjct: 241 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 300

Query: 301 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 360
           PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP
Sbjct: 301 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 360

Query: 361 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 420
           KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV
Sbjct: 361 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 420

Query: 421 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 480
           DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL
Sbjct: 421 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 480

Query: 481 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 540
           LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV
Sbjct: 481 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 540

Query: 541 KIV 543
           KIV
Sbjct: 541 KIV 543


>gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]
          Length = 699

 Score =  788 bits (2036), Expect = 0.0
 Identities = 400/423 (94%), Positives = 402/423 (95%), Gaps = 8/423 (1%)

Query: 129 TDEEEKTLQQVDRMLAEVGR--------VLQGRETEWLFGMDEGRKQLAASAGFRRLITV 180
           T E   TL  VD    +  R        + QGRETEWLFGMDEGRKQLAASAGFRRLITV
Sbjct: 277 TGEPRYTLHVVDSPTVKPSRDNHFAIFIIPQGRETEWLFGMDEGRKQLAASAGFRRLITV 336

Query: 181 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 240
           ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG
Sbjct: 337 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 396

Query: 241 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 300
           DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL
Sbjct: 397 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 456

Query: 301 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 360
           PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP
Sbjct: 457 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 516

Query: 361 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 420
           KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV
Sbjct: 517 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 576

Query: 421 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 480
           DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL
Sbjct: 577 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 636

Query: 481 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 540
           LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV
Sbjct: 637 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 696

Query: 541 KIV 543
           KIV
Sbjct: 697 KIV 699



 Score =  306 bits (784), Expect = 3e-83
 Identities = 151/151 (100%), Positives = 151/151 (100%)

Query: 1   MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS 60
           MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS
Sbjct: 1   MNLLPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS 60

Query: 61  ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD 120
           ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD
Sbjct: 61  ELSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLD 120

Query: 121 KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQ 151
           KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQ
Sbjct: 121 KGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQ 151


>gi|42542405 CGI-01 protein isoform 2 [Homo sapiens]
          Length = 613

 Score =  788 bits (2036), Expect = 0.0
 Identities = 400/423 (94%), Positives = 402/423 (95%), Gaps = 8/423 (1%)

Query: 129 TDEEEKTLQQVDRMLAEVGR--------VLQGRETEWLFGMDEGRKQLAASAGFRRLITV 180
           T E   TL  VD    +  R        + QGRETEWLFGMDEGRKQLAASAGFRRLITV
Sbjct: 191 TGEPRYTLHVVDSPTVKPSRDNHFAIFIIPQGRETEWLFGMDEGRKQLAASAGFRRLITV 250

Query: 181 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 240
           ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG
Sbjct: 251 ALHRGQQYESMDHIQAELSARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSG 310

Query: 241 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 300
           DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL
Sbjct: 311 DYVIEDVQGDDKRYFRRLIFLSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDL 370

Query: 301 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 360
           PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP
Sbjct: 371 PAAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFP 430

Query: 361 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 420
           KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV
Sbjct: 431 KSCIDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDV 490

Query: 421 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 480
           DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL
Sbjct: 491 DSKDPTLGMSCPPPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPL 550

Query: 481 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 540
           LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV
Sbjct: 551 LYVRRIEGEVNEILFCQLHPEQKLATPELLETAQALERTLRKPGRGWDDTYVLSDMLKTV 610

Query: 541 KIV 543
           KIV
Sbjct: 611 KIV 613



 Score =  130 bits (326), Expect = 4e-30
 Identities = 65/65 (100%), Positives = 65/65 (100%)

Query: 87  MKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTLDAVLTDEEEKTLQQVDRMLAEV 146
           MKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTLDAVLTDEEEKTLQQVDRMLAEV
Sbjct: 1   MKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTLDAVLTDEEEKTLQQVDRMLAEV 60

Query: 147 GRVLQ 151
           GRVLQ
Sbjct: 61  GRVLQ 65


>gi|153945707 endothelin converting enzyme 2 isoform C [Homo
           sapiens]
          Length = 255

 Score =  109 bits (272), Expect = 7e-24
 Identities = 56/154 (36%), Positives = 98/154 (63%), Gaps = 8/154 (5%)

Query: 4   LPKSSREFGSVDYWEKFFQQRGKKA-FEWYGTYLELCGVLHKYIKPREKVLVIGCGNSEL 62
           LP+ +  +  V+YW++ +Q     A ++W+G +     +L   ++P +++LV+GCGNS L
Sbjct: 13  LPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSAL 72

Query: 63  SEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKG 122
           S +L+  G+ ++ ++D S VV+  M+  +A   PQ+ +  MD+ +++FP ASF VVL+KG
Sbjct: 73  SYELFLGGFPNVTSVDYSSVVVAAMQARHA-HVPQLRWETMDVRKLDFPSASFDVVLEKG 131

Query: 123 TLDAVLTDEEE------KTLQQVDRMLAEVGRVL 150
           TLDA+L  E +      + +  VD++L+EV RVL
Sbjct: 132 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVL 165


>gi|153945761 endothelin converting enzyme 2 isoform A [Homo
           sapiens]
          Length = 883

 Score =  107 bits (267), Expect = 3e-23
 Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 4   LPKSSREFGSVDYWEKFFQQRGKKA-FEWYGTYLELCGVLHKYIKPREKVLVIGCGNSEL 62
           LP+ +  +  V+YW++ +Q     A ++W+G +     +L   ++P +++LV+GCGNS L
Sbjct: 13  LPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSAL 72

Query: 63  SEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKG 122
           S +L+  G+ ++ ++D S VV+  M+  +A   PQ+ +  MD+ +++FP ASF VVL+KG
Sbjct: 73  SYELFLGGFPNVTSVDYSSVVVAAMQARHA-HVPQLRWETMDVRKLDFPSASFDVVLEKG 131

Query: 123 TLDAVLTDEEE------KTLQQVDRMLAEVG-----RVLQGRETEWLFGMDEGRKQLAA- 170
           TLDA+L  E +      + +  VD++L+EVG     R L G  T+    +      LAA 
Sbjct: 132 TLDALLAGERDPWTVSSEGVHTVDQVLSEVGFQKGTRQLLGSRTQLELVLAGASLLLAAL 191

Query: 171 SAGFRRLITVALHRGQQYES-MDHIQAELSARVMELAPAGMPTQQQVPFLSVGG 223
             G    + V  HR   + + +      ++ +++E    G+   +     S GG
Sbjct: 192 LLGCLVALGVQYHRDPSHSTCLTEACIRVAGKILESLDRGVSPCEDFYQFSCGG 245


>gi|63253298 spermidine synthase [Homo sapiens]
          Length = 302

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 23/154 (14%)

Query: 318 HKAMIAGLALLRNPELLLEIPLALLVVGLGGGSLPLFVHDHFPKSCIDAVEIDPSMLEVA 377
           ++ MIA L L  +P      P  +L++G G G +   V  H     +   EID  +++V+
Sbjct: 79  YQEMIANLPLCSHPN-----PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVS 133

Query: 378 TQW-----FGFSQSDRMKVHIADGLDYIASLAGGGEARPCYDVIMFDVDSKDPTLGMSCP 432
            ++      G+S S ++ +H+ DG +++       + +  +DVI+   DS DP +G   P
Sbjct: 134 KKFLPGMAIGYS-SSKLTLHVGDGFEFMK------QNQDAFDVII--TDSSDP-MG---P 180

Query: 433 PPAFVEQSFLQKVKSILTPEGVFILNLVCRDLGL 466
             +  ++S+ Q +K+ L  +GV      C+ L L
Sbjct: 181 AESLFKESYYQLMKTALKEDGVLCCQGECQWLHL 214


>gi|112734863 methyltransferase like 12 [Homo sapiens]
          Length = 240

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 24/147 (16%)

Query: 29  FEWYGTYLELCGVLHKYIKPRE-----KVLVIGCGNSELSEQLYDVGYR--DIVNIDISE 81
           F+W+  Y E+ G+L   ++  +     +VL +GCG S L   LY       D++ +D S 
Sbjct: 51  FDWFFGYDEVQGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSP 110

Query: 82  VVIKQMKE-----------CNATRRPQMSFLKMDMTQMEF--PDASFQVVLDKGTLDAVL 128
           V +  M             C       + F+  D   +       SFQ++LDKGT DAV 
Sbjct: 111 VAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAV- 169

Query: 129 TDEEEKTLQQVDRMLAEVGRVLQGRET 155
                  L +  ++L+E  RVL  + T
Sbjct: 170 ---ARGGLPRAYQLLSECLRVLNPQGT 193


>gi|58219056 methyltransferase like 10 [Homo sapiens]
          Length = 291

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 12  GSVDYWE-------KFFQQRGKKAFEWYG--TYLELCGVLHKYIKPRE-KVLVIGCGNSE 61
           G+ ++W+       + F++ G     W+G  +   L   + K+  P +  VL IG GN  
Sbjct: 33  GTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRWMQKHKIPLDASVLDIGTGNGV 92

Query: 62  LSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKM---DMTQMEFPDASFQVV 118
              +L   G+ +I  ID S   I+     +   +  +S +K+   D   +    + F + 
Sbjct: 93  FLVELAKFGFSNITGIDYSPSAIQLSG--SIIEKEGLSNIKLKVEDFLNLSTQLSGFHIC 150

Query: 119 LDKGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQ 151
           +DKGT DA+  +  +  +++  + +  + RVL+
Sbjct: 151 IDKGTFDAISLN-PDNAIEKRKQYVKSLSRVLK 182


>gi|13236559 hypothetical protein LOC79169 [Homo sapiens]
          Length = 263

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 268 QSEARLLKDVSHKAQKKRKKDRKKQRPADAEDLPAAPGQ------SIDKSYLCCEHHK 319
           + E +  K   HK +KK KKD++ +RPA+A   P +P +        D +  CC+  K
Sbjct: 186 KKEKKKKKKRKHKKEKK-KKDKEHRRPAEATSSPTSPERPRHHHHDSDSNSPCCKRRK 242


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 275 KDVSHKAQKKRKKDRKK-QRPADAEDLPAAPGQSIDK 310
           KD   K +KKRKK +KK +  A+A+ + A PG S+D+
Sbjct: 212 KDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQ 248


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 275 KDVSHKAQKKRKKDRKK-QRPADAEDLPAAPGQSIDK 310
           KD   K +KKRKK +KK +  A+A+ + A PG S+D+
Sbjct: 223 KDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQ 259


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 275 KDVSHKAQKKRKKDRKK-QRPADAEDLPAAPGQSIDK 310
           KD   K +KKRKK +KK +  A+A+ + A PG S+D+
Sbjct: 212 KDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQ 248


>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
          Length = 360

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 275 KDVSHKAQKKRKKDRKK-QRPADAEDLPAAPGQSIDK 310
           KD   K +KKRKK +KK +  A+A+ + A PG S+D+
Sbjct: 231 KDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQ 267


>gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]
          Length = 920

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 437 VEQSFLQKVKSILTPEGVFILNLVCRDLG--LKDSVLAGLKAVFPLLY-----VRRIEGE 489
           +  +F+ KV  +L P+GV + N  C   G  L  +  + LK  FP ++     V R+  +
Sbjct: 391 LRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEK 450

Query: 490 VNEILFCQLH 499
              IL+C LH
Sbjct: 451 REVILYCDLH 460


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 1 [Homo
           sapiens]
          Length = 1834

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 266 VVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDLPAAP--GQSIDKSYLCCEHHKAM-- 321
           V+Q+  R L     K +KK KK R+K+    A D    P  G+ ++ S L  E +K M  
Sbjct: 152 VIQNFKRTLS----KKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPE 207

Query: 322 IAGLALLRNPELLLE 336
            +    + NPE++++
Sbjct: 208 TSFTRTISNPEVVMK 222


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 2 [Homo
           sapiens]
          Length = 1651

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 266 VVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDLPAAP--GQSIDKSYLCCEHHKAM-- 321
           V+Q+  R L     K +KK KK R+K+    A D    P  G+ ++ S L  E +K M  
Sbjct: 153 VIQNFKRTLS----KKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPE 208

Query: 322 IAGLALLRNPELLLE 336
            +    + NPE++++
Sbjct: 209 TSFTRTISNPEVVMK 223


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 3 [Homo
           sapiens]
          Length = 1612

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 266 VVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDLPAAP--GQSIDKSYLCCEHHKAM-- 321
           V+Q+  R L     K +KK KK R+K+    A D    P  G+ ++ S L  E +K M  
Sbjct: 152 VIQNFKRTLS----KKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPE 207

Query: 322 IAGLALLRNPELLLE 336
            +    + NPE++++
Sbjct: 208 TSFTRTISNPEVVMK 222


>gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens]
          Length = 902

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 11/77 (14%)

Query: 432 PPPAFVEQSFLQKVKSILTPEGVFILNLVC----RDLGLKDSVLAGLKAVFPLLY----- 482
           P    +   F+ KV  +L P+GV + N  C    RDL      +  LK  FP ++     
Sbjct: 484 PDAQLLRDIFVFKVLPMLNPDGVIVGNYRCSLAGRDLNRHYKTI--LKESFPCIWYTRNM 541

Query: 483 VRRIEGEVNEILFCQLH 499
           ++R+  E   +L+C  H
Sbjct: 542 IKRLLEEREVLLYCDFH 558


>gi|4758404 FSHD region gene 1 [Homo sapiens]
          Length = 258

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 261 LSNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAE 298
           ++  + V+S   +LK    K++KK+ KD+K++R  D E
Sbjct: 1   MAEYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEE 38


>gi|30794488 kinesin family member 27 [Homo sapiens]
          Length = 1401

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 35/183 (19%), Positives = 78/183 (42%), Gaps = 26/183 (14%)

Query: 4    LPKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNSELS 63
            L +    FGS+D+ +K  +Q+     +W    +E      K +  R+++  +    ++L 
Sbjct: 905  LKRRKGSFGSIDHLQKLDEQK-----KWLDEEVE------KVLNQRQELEEL---EADLK 950

Query: 64   EQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSF-LKMDMTQMEFPDASFQVVLDKG 122
            ++   V  ++ +  + S +  K+++   A     +    ++++ + E  + + Q+     
Sbjct: 951  KREAIVSKKEALLQEKSHLENKKLRSSQALNTDSLKISTRLNLLEQELSEKNVQLQTSTA 1010

Query: 123  TLDAVLTDEEE----------KTLQQVDRMLAEVGRVLQGRETEWLFGMDEGRKQLAASA 172
                 ++++ E          K    VD  L   GRVL   E   LF ++EG + L A+ 
Sbjct: 1011 EEKTKISEQVEVLQKEKDQLQKRRHNVDEKLKN-GRVLSPEEEHVLFQLEEGIEALEAAI 1069

Query: 173  GFR 175
             +R
Sbjct: 1070 EYR 1072


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 15/108 (13%)

Query: 31   WYGTYL-----ELCGVLHKYIKPREKVLVIGCGNSELSEQLYDVGYRDIVNIDISEVVIK 85
            W+G +L     EL       I P+++V ++          L  +G R + N  + E ++ 
Sbjct: 2091 WWGQFLSNVLQELYNSEQLLIFPQDRVFML----------LSCIGQRSLSNSGVLESLLN 2140

Query: 86   QMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTLDAVLTDEEE 133
             +    +  +PQ+   +     ++ P  S+ V+L    LD V T E+E
Sbjct: 2141 LLDNLLSPLQPQLPMHRRTEGVLDIPMISWVVMLVSRLLDYVATVEDE 2188


>gi|209969682 coiled-coil domain-containing-like [Homo sapiens]
          Length = 297

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 2/33 (6%)

Query: 136 LQQVDRMLAEVGRVLQGRETEWLFGMDEGRKQL 168
           +QQ++ +L+  GR  QG + E  +GM++GR++L
Sbjct: 71  IQQLEEVLSPTGR--QGEKEEHKWGMEQGRQEL 101


>gi|32130516 serologically defined colon cancer antigen 1 [Homo
           sapiens]
          Length = 1076

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 5/49 (10%)

Query: 262 SNRNVVQSEARLLKDVSHKAQKKRKKDRKKQRPADAEDLPAAPGQSIDK 310
           SN +  +S++R      H + K+R++ +KK+ P+D+ DL A  G+  +K
Sbjct: 803 SNSSDSKSQSR-----RHLSAKERREMKKKKLPSDSGDLEALEGKDKEK 846


>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
          Length = 1257

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 128 LTDEEEKTLQQ-VDRMLAEVGRVLQGRETEWLFGMDEGRKQLAASAGFRRLITVALHRGQ 186
           + +E  K L   VDR+L E    LQ    E +  ++E    +  S  FR+ +  +LH  +
Sbjct: 457 MNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESETFRKNLEESLHDKE 516

Query: 187 QY-ESMDHIQAELSARVMELAPAGMPT 212
           +  E ++ +++EL    M       PT
Sbjct: 517 RLAEEIEKLRSELDQLKMRTGSLIEPT 543


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,408,746
Number of Sequences: 37866
Number of extensions: 892275
Number of successful extensions: 2926
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2900
Number of HSP's gapped (non-prelim): 35
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.