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Search of human proteins with 55743086
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo
sapiens]
(390 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo s... 811 0.0
gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo sa... 773 0.0
gi|52546685 olfactory receptor, family 1, subfamily L, member 3 ... 30 2.9
gi|153791876 olfactory receptor, family 6, subfamily Q, member 1... 30 2.9
gi|197333692 leucine rich repeat containing 8 family, member B [... 30 3.7
gi|21245134 leucine rich repeat containing 8 family, member B [H... 30 3.7
gi|205830453 catechol-O-methyltransferase isoform MB-COMT [Homo ... 29 8.3
gi|205830451 catechol-O-methyltransferase isoform MB-COMT [Homo ... 29 8.3
gi|4502969 catechol-O-methyltransferase isoform MB-COMT [Homo sa... 29 8.3
gi|7662334 RAS guanyl releasing protein 3 (calcium and DAG-regul... 29 8.3
gi|23503293 solute carrier family 16, member 11 [Homo sapiens] 29 8.3
>gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo
sapiens]
Length = 390
Score = 811 bits (2095), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MFPAQAKENAGFSGCGGDTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIF 60
MFPAQAKENAGFSGCGGDTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIF
Sbjct: 1 MFPAQAKENAGFSGCGGDTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIF 60
Query: 61 MGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIF 120
MGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIF
Sbjct: 61 MGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIF 120
Query: 121 VLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGF 180
VLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGF
Sbjct: 121 VLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGF 180
Query: 181 RGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRA 240
RGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRA
Sbjct: 181 RGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRA 240
Query: 241 FHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFI 300
FHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFI
Sbjct: 241 FHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFI 300
Query: 301 GICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAA 360
GICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAA
Sbjct: 301 GICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAA 360
Query: 361 LHICHAVILLQLWLGPQPFPKSTQHSKKAH 390
LHICHAVILLQLWLGPQPFPKSTQHSKKAH
Sbjct: 361 LHICHAVILLQLWLGPQPFPKSTQHSKKAH 390
>gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo
sapiens]
Length = 438
Score = 773 bits (1995), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 19 TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN 78
TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN
Sbjct: 67 TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN 126
Query: 79 IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI 138
IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI
Sbjct: 127 IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI 186
Query: 139 NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG 198
NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG
Sbjct: 187 NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG 246
Query: 199 LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL 258
LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL
Sbjct: 247 LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL 306
Query: 259 CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH 318
CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH
Sbjct: 307 CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH 366
Query: 319 TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP 378
TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP
Sbjct: 367 TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP 426
Query: 379 FPKSTQHSKKAH 390
FPKSTQHSKKAH
Sbjct: 427 FPKSTQHSKKAH 438
>gi|52546685 olfactory receptor, family 1, subfamily L, member 3
[Homo sapiens]
Length = 324
Score = 30.4 bits (67), Expect = 2.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 58 YIFMGLYYATSRGTDIRMAQNIFAVLYLATL---LLVFLIYHQTCKVPPFVFFFMCCASY 114
+I +GL +SR D R +F ++YL TL LL+ L H ++ ++FF+ S+
Sbjct: 12 FILLGL---SSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQNPMYFFLSILSF 68
>gi|153791876 olfactory receptor, family 6, subfamily Q, member 1
[Homo sapiens]
Length = 317
Score = 30.4 bits (67), Expect = 2.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 FVYIFMGLYYAT--SRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCAS 113
+V I M L+Y S GT IR+A + V +L +L ++L+ T P + F C AS
Sbjct: 127 YVAICMPLHYGAFVSWGTCIRLAAACWLVGFLTPILPIYLLSQLTFYGPNVIDHFSCDAS 186
>gi|197333692 leucine rich repeat containing 8 family, member B
[Homo sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 3.7
Identities = 40/157 (25%), Positives = 55/157 (35%), Gaps = 37/157 (23%)
Query: 224 WTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGE---------SILSLLRD 274
W V W ++ + L +A+L L L LC E IL +
Sbjct: 24 WDVFWYYITLIMLL-----VAVLAGALQLTQSRVLCCLPCKVEFDNHCAVPWDILKASMN 78
Query: 275 PSKRKVPPQPLTPNQIVSTLFTSNFI---GICFSRSLHYQFYVWYFHTLPYLLWAMPARW 331
S P PL P +I + L + +C+ + LH W+ PYL+
Sbjct: 79 TSSNPGTPLPL-PLRIQNDLHRQQYSYIDAVCYEKQLH-----WFAKFFPYLV------- 125
Query: 332 LTHLLRLLVLGLIELSWNTYPSTSCS----SAALHIC 364
LL L+ W YPSTS A LH C
Sbjct: 126 ---LLHTLIFAACSNFWLHYPSTSSRLEHFVAILHKC 159
>gi|21245134 leucine rich repeat containing 8 family, member B [Homo
sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 3.7
Identities = 40/157 (25%), Positives = 55/157 (35%), Gaps = 37/157 (23%)
Query: 224 WTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGE---------SILSLLRD 274
W V W ++ + L +A+L L L LC E IL +
Sbjct: 24 WDVFWYYITLIMLL-----VAVLAGALQLTQSRVLCCLPCKVEFDNHCAVPWDILKASMN 78
Query: 275 PSKRKVPPQPLTPNQIVSTLFTSNFI---GICFSRSLHYQFYVWYFHTLPYLLWAMPARW 331
S P PL P +I + L + +C+ + LH W+ PYL+
Sbjct: 79 TSSNPGTPLPL-PLRIQNDLHRQQYSYIDAVCYEKQLH-----WFAKFFPYLV------- 125
Query: 332 LTHLLRLLVLGLIELSWNTYPSTSCS----SAALHIC 364
LL L+ W YPSTS A LH C
Sbjct: 126 ---LLHTLIFAACSNFWLHYPSTSSRLEHFVAILHKC 159
>gi|205830453 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 129 VAMVLLFLSINLLLAQRWGWGCC 151
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|205830451 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 129 VAMVLLFLSINLLLAQRWGWGCC 151
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|4502969 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 8.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 129 VAMVLLFLSINLLLAQRWGWGCC 151
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|7662334 RAS guanyl releasing protein 3 (calcium and
DAG-regulated) isoform 2 [Homo sapiens]
Length = 689
Score = 28.9 bits (63), Expect = 8.3
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 231 LPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESI-LSLLRDPSKRKVPPQPLTPNQ 289
L E + L A H L LL +L +H + LSL+ +P K P P TPN+
Sbjct: 337 LSELVSLQNASHHLEPNMDLINLLTLSLDLYHTEDDIYKLSLVLEPRNSKSPTSPTTPNK 396
Query: 290 IVSTL 294
V L
Sbjct: 397 PVVPL 401
>gi|23503293 solute carrier family 16, member 11 [Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 8.3
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 27/94 (28%)
Query: 133 LLFLSINLLLAQRWGWGCCF----------FS----LAVSVKM-----NVLLFAPGLLFL 173
LL L + L L +GW F FS LAV + + + LL AP L L
Sbjct: 128 LLHLYLGLGLLAGFGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQ-L 186
Query: 174 LLTQFGFRGALPKLGI-------CAGLQVVLGLP 200
LL FG+RGAL LG C L + L LP
Sbjct: 187 LLDTFGWRGALLLLGAITLHLTPCGALLLPLVLP 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.331 0.144 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,647,444
Number of Sequences: 37866
Number of extensions: 670108
Number of successful extensions: 1866
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1861
Number of HSP's gapped (non-prelim): 11
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.