BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|54234014 hydroxyacid oxidase 2 [Homo sapiens] (351 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|54234014 hydroxyacid oxidase 2 [Homo sapiens] 702 0.0 gi|7705393 hydroxyacid oxidase 2 [Homo sapiens] 702 0.0 gi|11068137 hydroxyacid oxidase 1 [Homo sapiens] 336 2e-92 gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Ho... 33 0.38 gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Hom... 33 0.38 gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Hom... 33 0.38 gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Ho... 33 0.38 gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Ho... 33 0.38 gi|217035148 inosine monophosphate dehydrogenase 1 isoform f [Ho... 33 0.38 gi|217035146 inosine monophosphate dehydrogenase 1 isoform e [Ho... 33 0.38 gi|45006951 dihydroorotate dehydrogenase precursor [Homo sapiens] 33 0.50 gi|66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens] 30 2.5 >gi|54234014 hydroxyacid oxidase 2 [Homo sapiens] Length = 351 Score = 702 bits (1811), Expect = 0.0 Identities = 351/351 (100%), Positives = 351/351 (100%) Query: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT Sbjct: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60 Query: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA Sbjct: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120 Query: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT Sbjct: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180 Query: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG Sbjct: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240 Query: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG Sbjct: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300 Query: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL Sbjct: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351 >gi|7705393 hydroxyacid oxidase 2 [Homo sapiens] Length = 351 Score = 702 bits (1811), Expect = 0.0 Identities = 351/351 (100%), Positives = 351/351 (100%) Query: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT Sbjct: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60 Query: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA Sbjct: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120 Query: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT Sbjct: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180 Query: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG Sbjct: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240 Query: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG Sbjct: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300 Query: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL Sbjct: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351 >gi|11068137 hydroxyacid oxidase 1 [Homo sapiens] Length = 370 Score = 336 bits (862), Expect = 2e-92 Identities = 166/357 (46%), Positives = 241/357 (67%), Gaps = 12/357 (3%) Query: 3 LVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRT 62 L+C+ D++ HA+ L KS D+ GA+D T DNIAAF R +L PR LR+V+E D T Sbjct: 5 LICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLST 64 Query: 63 TIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPE 122 ++ G+ +S PIC+ T + DGE++T RA Q+ G + S++A+ S+E++ A PE Sbjct: 65 SVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPE 124 Query: 123 GLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLR-------R 175 LRW QLY++ D ++ K+L+++ E +G+KA+ +T+DTP GNR D+RN+ + + Sbjct: 125 ALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMK 184 Query: 176 NLTLTDLQ-SPKKG----NAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDA 230 N + L SP++ + + + I S+ W D+ W + +T LPI+ KGIL +DA Sbjct: 185 NFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDA 244 Query: 231 ELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKAL 290 AVKH + GI+VSNHG RQLD V A+ID L E+V AV+GK+EV+LDGGVR G DVLKAL Sbjct: 245 REAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKAL 304 Query: 291 ALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQ 347 ALGAK +F+GRPI+WGLA +GE GV++VL IL EF +MAL+GC++V I++ LV+ Sbjct: 305 ALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVR 361 >gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Homo sapiens] Length = 589 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 434 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 475 >gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Homo sapiens] Length = 563 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 408 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 449 >gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Homo sapiens] Length = 599 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 444 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 485 >gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Homo sapiens] Length = 566 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 411 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 452 >gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Homo sapiens] Length = 489 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 334 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 375 >gi|217035148 inosine monophosphate dehydrogenase 1 isoform f [Homo sapiens] Length = 509 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 354 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 395 >gi|217035146 inosine monophosphate dehydrogenase 1 isoform e [Homo sapiens] Length = 514 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + + DGG++T V+KALALGA + +G + GE+ Sbjct: 359 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 400 >gi|45006951 dihydroorotate dehydrogenase precursor [Homo sapiens] Length = 395 Score = 32.7 bits (73), Expect = 0.50 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 238 VQGIIVSNHGG---RQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGA 294 +QG + S GG + L ++ S + E+ A +G++ + GGV +G D L+ + GA Sbjct: 292 LQGALRSETGGLSGKPLRDL--STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGA 349 Query: 295 KCIFLGRPI-LWGLACKGEHGVKEVLNILTNE 325 + L + WG G+ VK L L E Sbjct: 350 SLVQLYTALTFWGPPVVGK--VKRELEALLKE 379 >gi|66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens] Length = 514 Score = 30.4 bits (67), Expect = 2.5 Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313 + V DGG++ + KALALGA + +G + GE+ Sbjct: 359 VPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEY 400 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,116,463 Number of Sequences: 37866 Number of extensions: 498655 Number of successful extensions: 1072 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1059 Number of HSP's gapped (non-prelim): 12 length of query: 351 length of database: 18,247,518 effective HSP length: 103 effective length of query: 248 effective length of database: 14,347,320 effective search space: 3558135360 effective search space used: 3558135360 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.