Search of human proteins with 51317380

Search of human proteins with 51317380

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]
         (617 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]                 1259   0.0  
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    31   3.8  
gi|7662176 ProSAPiP1 protein [Homo sapiens]                            31   3.8  
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]              30   6.6  
gi|6912274 brain-specific membrane-anchored protein precursor [H...    30   6.6  

>gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]
          Length = 617

 Score = 1259 bits (3258), Expect = 0.0
 Identities = 617/617 (100%), Positives = 617/617 (100%)

Query: 1   MRCLAARVNYKTLIIICALFTLVTVLLWNKCSSDKAIQFPRRSSSGFRVDGFEKRAAASE 60
           MRCLAARVNYKTLIIICALFTLVTVLLWNKCSSDKAIQFPRRSSSGFRVDGFEKRAAASE
Sbjct: 1   MRCLAARVNYKTLIIICALFTLVTVLLWNKCSSDKAIQFPRRSSSGFRVDGFEKRAAASE 60

Query: 61  SNNYMNHVAKQQSEEAFPQEQQKAPPVVGGFNSNVGSKVLGLKYEEIDCLINDEHTIKGR 120
           SNNYMNHVAKQQSEEAFPQEQQKAPPVVGGFNSNVGSKVLGLKYEEIDCLINDEHTIKGR
Sbjct: 61  SNNYMNHVAKQQSEEAFPQEQQKAPPVVGGFNSNVGSKVLGLKYEEIDCLINDEHTIKGR 120

Query: 121 REGNEVFLPFTWVEKYFDVYGKVVQYDGYDRFEFSHSYSKVYAQRAPYHPDGVFMSFEGY 180
           REGNEVFLPFTWVEKYFDVYGKVVQYDGYDRFEFSHSYSKVYAQRAPYHPDGVFMSFEGY
Sbjct: 121 REGNEVFLPFTWVEKYFDVYGKVVQYDGYDRFEFSHSYSKVYAQRAPYHPDGVFMSFEGY 180

Query: 181 NVEVRDRVKCISGVEGVPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETAE 240
           NVEVRDRVKCISGVEGVPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETAE
Sbjct: 181 NVEVRDRVKCISGVEGVPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETAE 240

Query: 241 DRDKNKPNDWTVPKGCFMANVADKSRFTNVKQFIAPETSEGVSLQLGNTKDFIISFDLKF 300
           DRDKNKPNDWTVPKGCFMANVADKSRFTNVKQFIAPETSEGVSLQLGNTKDFIISFDLKF
Sbjct: 241 DRDKNKPNDWTVPKGCFMANVADKSRFTNVKQFIAPETSEGVSLQLGNTKDFIISFDLKF 300

Query: 301 LTNGSVSVVLETTEKNQLFTIHYVSNAQLIAFKERDIYYGIGPRTSWSTVTRDLVTDLRK 360
           LTNGSVSVVLETTEKNQLFTIHYVSNAQLIAFKERDIYYGIGPRTSWSTVTRDLVTDLRK
Sbjct: 301 LTNGSVSVVLETTEKNQLFTIHYVSNAQLIAFKERDIYYGIGPRTSWSTVTRDLVTDLRK 360

Query: 361 GVGLSNTKAVKPTKIMPKKVVRLIAKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEKG 420
           GVGLSNTKAVKPTKIMPKKVVRLIAKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEKG
Sbjct: 361 GVGLSNTKAVKPTKIMPKKVVRLIAKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEKG 420

Query: 421 GWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFLNSALRATAPYKFL 480
           GWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFLNSALRATAPYKFL
Sbjct: 421 GWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFLNSALRATAPYKFL 480

Query: 481 SEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYER 540
           SEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYER
Sbjct: 481 SEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYER 540

Query: 541 GMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPVFKE 600
           GMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPVFKE
Sbjct: 541 GMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPVFKE 600

Query: 601 FVKRWKSYLKGSRAKHN 617
           FVKRWKSYLKGSRAKHN
Sbjct: 601 FVKRWKSYLKGSRAKHN 617


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 416 QDEKGGWPIMVTRKLGEGFKSLEPGWYSAM 445
           +DE GGW +  +R+ GE ++   PGW   M
Sbjct: 214 EDEDGGWRLAGSRRDGERWRPHSPGWREHM 243


>gi|7662176 ProSAPiP1 protein [Homo sapiens]
          Length = 673

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 23/181 (12%)

Query: 428 RKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFL------------NSALRATA 475
           R  G G     PG Y +  +G A S  +   L   DH  +            +S     A
Sbjct: 72  RGSGSGASRERPGRYPSEDKGLANSLYLNGELRGSDHTDVCGNVVGSSGGSSSSGGSDKA 131

Query: 476 PYKFLSEQHGVKAVFMN-KHDWYEEYPTTPSSF--VLNGFMYSLIGLYDLKETAGEKLGK 532
           P ++    H  K +  + K D   E    PS+F  V+    +S+  L    +T G   G+
Sbjct: 132 PPQYREPSHPPKLLATSGKLDQCSEPLVRPSAFKPVVPKNFHSMQNLCP-PQTNGTPEGR 190

Query: 533 EARSLYERGMESLKAMLP-------LYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQ 585
           +     + G++  + M P       L D+G  ++  L  +    + +LA     T+HIN+
Sbjct: 191 QGPGGLKGGLDKSRTMTPAGGSGSGLSDSGRNSLTSLPTYSSSYSQHLAPLSASTSHINR 250

Query: 586 L 586
           +
Sbjct: 251 I 251


>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
          Length = 553

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 180 YNVEVRDRVKCISGVEGVPLSTQWGPQGYFYPIQIAQYGLSHYSKNLTEKPPHIEVYETA 239
           Y  +   +VK I G +     ++W   G FYP    Q G    +    EK   I V  TA
Sbjct: 104 YEHQYYAKVKAIWGTK----CSKWAESGRFYPFLETQIGPPEVALTTDEK--SISVVLTA 157

Query: 240 EDRDKNKPNDWTVPKGCFMANVADKSRFTNVK 271
            ++ K  P D  V      +N+       N K
Sbjct: 158 PEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTK 189


>gi|6912274 brain-specific membrane-anchored protein precursor [Homo
           sapiens]
          Length = 342

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 1   MRCLAARVNYKTLIIICALFTLVTVLLWNKCSS 33
           + C++ R      I+ C LF  V V+LW  CS+
Sbjct: 256 LSCMSRRSGLPRWILACCLFLSVLVMLWLSCST 288


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,625,178
Number of Sequences: 37866
Number of extensions: 975328
Number of successful extensions: 2031
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2025
Number of HSP's gapped (non-prelim): 6
length of query: 617
length of database: 18,247,518
effective HSP length: 108
effective length of query: 509
effective length of database: 14,157,990
effective search space: 7206416910
effective search space used: 7206416910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.