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Search of human proteins with 5031953
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo
sapiens]
(438 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo sa... 906 0.0
gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo s... 773 0.0
gi|52546685 olfactory receptor, family 1, subfamily L, member 3 ... 30 3.3
gi|153791876 olfactory receptor, family 6, subfamily Q, member 1... 30 3.3
gi|197333692 leucine rich repeat containing 8 family, member B [... 30 4.3
gi|21245134 leucine rich repeat containing 8 family, member B [H... 30 4.3
gi|205830453 catechol-O-methyltransferase isoform MB-COMT [Homo ... 29 9.6
gi|205830451 catechol-O-methyltransferase isoform MB-COMT [Homo ... 29 9.6
gi|4502969 catechol-O-methyltransferase isoform MB-COMT [Homo sa... 29 9.6
gi|7662334 RAS guanyl releasing protein 3 (calcium and DAG-regul... 29 9.6
gi|23503293 solute carrier family 16, member 11 [Homo sapiens] 29 9.6
>gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo
sapiens]
Length = 438
Score = 906 bits (2342), Expect = 0.0
Identities = 438/438 (100%), Positives = 438/438 (100%)
Query: 1 MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWV 60
MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWV
Sbjct: 1 MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWV 60
Query: 61 IHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTD 120
IHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTD
Sbjct: 61 IHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTD 120
Query: 121 IRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMV 180
IRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMV
Sbjct: 121 IRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMV 180
Query: 181 LLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAG 240
LLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAG
Sbjct: 181 LLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAG 240
Query: 241 LQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTL 300
LQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTL
Sbjct: 241 LQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTL 300
Query: 301 LLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQF 360
LLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQF
Sbjct: 301 LLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQF 360
Query: 361 YVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL 420
YVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL
Sbjct: 361 YVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL 420
Query: 421 WLGPQPFPKSTQHSKKAH 438
WLGPQPFPKSTQHSKKAH
Sbjct: 421 WLGPQPFPKSTQHSKKAH 438
>gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo
sapiens]
Length = 390
Score = 773 bits (1995), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 67 TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN 126
TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN
Sbjct: 19 TEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTDIRMAQN 78
Query: 127 IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI 186
IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI
Sbjct: 79 IFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSI 138
Query: 187 NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG 246
NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG
Sbjct: 139 NLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLG 198
Query: 247 LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL 306
LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL
Sbjct: 199 LPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFAL 258
Query: 307 CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH 366
CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH
Sbjct: 259 CRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQFYVWYFH 318
Query: 367 TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP 426
TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP
Sbjct: 319 TLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQLWLGPQP 378
Query: 427 FPKSTQHSKKAH 438
FPKSTQHSKKAH
Sbjct: 379 FPKSTQHSKKAH 390
>gi|52546685 olfactory receptor, family 1, subfamily L, member 3
[Homo sapiens]
Length = 324
Score = 30.4 bits (67), Expect = 3.3
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 106 YIFMGLYYATSRGTDIRMAQNIFAVLYLATL---LLVFLIYHQTCKVPPFVFFFMCCASY 162
+I +GL +SR D R +F ++YL TL LL+ L H ++ ++FF+ S+
Sbjct: 12 FILLGL---SSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQNPMYFFLSILSF 68
>gi|153791876 olfactory receptor, family 6, subfamily Q, member 1
[Homo sapiens]
Length = 317
Score = 30.4 bits (67), Expect = 3.3
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 104 FVYIFMGLYYAT--SRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCAS 161
+V I M L+Y S GT IR+A + V +L +L ++L+ T P + F C AS
Sbjct: 127 YVAICMPLHYGAFVSWGTCIRLAAACWLVGFLTPILPIYLLSQLTFYGPNVIDHFSCDAS 186
>gi|197333692 leucine rich repeat containing 8 family, member B
[Homo sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 4.3
Identities = 40/157 (25%), Positives = 55/157 (35%), Gaps = 37/157 (23%)
Query: 272 WTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGE---------SILSLLRD 322
W V W ++ + L +A+L L L LC E IL +
Sbjct: 24 WDVFWYYITLIMLL-----VAVLAGALQLTQSRVLCCLPCKVEFDNHCAVPWDILKASMN 78
Query: 323 PSKRKVPPQPLTPNQIVSTLFTSNFI---GICFSRSLHYQFYVWYFHTLPYLLWAMPARW 379
S P PL P +I + L + +C+ + LH W+ PYL+
Sbjct: 79 TSSNPGTPLPL-PLRIQNDLHRQQYSYIDAVCYEKQLH-----WFAKFFPYLV------- 125
Query: 380 LTHLLRLLVLGLIELSWNTYPSTSCS----SAALHIC 412
LL L+ W YPSTS A LH C
Sbjct: 126 ---LLHTLIFAACSNFWLHYPSTSSRLEHFVAILHKC 159
>gi|21245134 leucine rich repeat containing 8 family, member B [Homo
sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 4.3
Identities = 40/157 (25%), Positives = 55/157 (35%), Gaps = 37/157 (23%)
Query: 272 WTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGE---------SILSLLRD 322
W V W ++ + L +A+L L L LC E IL +
Sbjct: 24 WDVFWYYITLIMLL-----VAVLAGALQLTQSRVLCCLPCKVEFDNHCAVPWDILKASMN 78
Query: 323 PSKRKVPPQPLTPNQIVSTLFTSNFI---GICFSRSLHYQFYVWYFHTLPYLLWAMPARW 379
S P PL P +I + L + +C+ + LH W+ PYL+
Sbjct: 79 TSSNPGTPLPL-PLRIQNDLHRQQYSYIDAVCYEKQLH-----WFAKFFPYLV------- 125
Query: 380 LTHLLRLLVLGLIELSWNTYPSTSCS----SAALHIC 412
LL L+ W YPSTS A LH C
Sbjct: 126 ---LLHTLIFAACSNFWLHYPSTSSRLEHFVAILHKC 159
>gi|205830453 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 177 VAMVLLFLSINLLLAQRWGWGCC 199
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|205830451 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 177 VAMVLLFLSINLLLAQRWGWGCC 199
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|4502969 catechol-O-methyltransferase isoform MB-COMT [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 177 VAMVLLFLSINLLLAQRWGWGCC 199
V + L+ L + LLL + WGWG C
Sbjct: 12 VLLGLVLLVVLLLLLRHWGWGLC 34
>gi|7662334 RAS guanyl releasing protein 3 (calcium and
DAG-regulated) isoform 2 [Homo sapiens]
Length = 689
Score = 28.9 bits (63), Expect = 9.6
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 279 LPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESI-LSLLRDPSKRKVPPQPLTPNQ 337
L E + L A H L LL +L +H + LSL+ +P K P P TPN+
Sbjct: 337 LSELVSLQNASHHLEPNMDLINLLTLSLDLYHTEDDIYKLSLVLEPRNSKSPTSPTTPNK 396
Query: 338 IVSTL 342
V L
Sbjct: 397 PVVPL 401
>gi|23503293 solute carrier family 16, member 11 [Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 9.6
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 27/94 (28%)
Query: 181 LLFLSINLLLAQRWGWGCCF----------FS----LAVSVKM-----NVLLFAPGLLFL 221
LL L + L L +GW F FS LAV + + + LL AP L L
Sbjct: 128 LLHLYLGLGLLAGFGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQ-L 186
Query: 222 LLTQFGFRGALPKLGI-------CAGLQVVLGLP 248
LL FG+RGAL LG C L + L LP
Sbjct: 187 LLDTFGWRGALLLLGAITLHLTPCGALLLPLVLP 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.332 0.143 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,375,601
Number of Sequences: 37866
Number of extensions: 746734
Number of successful extensions: 2069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2064
Number of HSP's gapped (non-prelim): 11
length of query: 438
length of database: 18,247,518
effective HSP length: 105
effective length of query: 333
effective length of database: 14,271,588
effective search space: 4752438804
effective search space used: 4752438804
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.