Search of human proteins with 5031639

Search of human proteins with 5031639

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5031639 cornichon-like [Homo sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5031639 cornichon-like [Homo sapiens]                              306   4e-84
gi|22749039 cornichon homolog 3 [Homo sapiens]                        226   4e-60
gi|32698938 cornichon homolog 2 [Homo sapiens]                        222   7e-59
gi|7661824 cornichon homolog 4 [Homo sapiens]                          98   2e-21
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]           29   1.6  
gi|223972690 adenosine deaminase domain containing 2 isoform 2 [...    27   4.5  
gi|223972688 adenosine deaminase domain containing 2 isoform 1 [...    27   4.5  
gi|52421343 olfactory receptor, family 52, subfamily A, member 4...    27   4.5  
gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like...    27   5.9  
gi|170932505 neuromedin U receptor 2 [Homo sapiens]                    27   5.9  

>gi|5031639 cornichon-like [Homo sapiens]
          Length = 144

 Score =  306 bits (784), Expect = 4e-84
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHA 60
           MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHA
Sbjct: 1   MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHA 60

Query: 61  FFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGW 120
           FFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGW
Sbjct: 61  FFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGW 120

Query: 121 CKLAFYLLAFFYYLYGMIYVLVSS 144
           CKLAFYLLAFFYYLYGMIYVLVSS
Sbjct: 121 CKLAFYLLAFFYYLYGMIYVLVSS 144


>gi|22749039 cornichon homolog 3 [Homo sapiens]
          Length = 160

 Score =  226 bits (577), Expect = 4e-60
 Identities = 109/160 (68%), Positives = 120/160 (75%), Gaps = 16/160 (10%)

Query: 1   MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNT------------- 47
           MAFTFAAFCYML+L+L AALIFFAIWHIIAFDEL+TD+K+PIDQCN              
Sbjct: 1   MAFTFAAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERI 60

Query: 48  ---LNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPT 104
              L  LVLPEY IH+ FC+MFLCA EWLTLGLN+PLL YH WRY   P  S    YDP 
Sbjct: 61  CFLLRKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPP 120

Query: 105 TIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVSS 144
            +MNAD L+YCQKE WCKLAFYLL+FFYYLY MIY LVSS
Sbjct: 121 VVMNADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLVSS 160


>gi|32698938 cornichon homolog 2 [Homo sapiens]
          Length = 160

 Score =  222 bits (566), Expect = 7e-59
 Identities = 105/159 (66%), Positives = 118/159 (74%), Gaps = 16/159 (10%)

Query: 1   MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQ---------------- 44
           MAFTFAAFCYML L+L A+LIFF IWHIIAFDEL+TD+KNPIDQ                
Sbjct: 1   MAFTFAAFCYMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQGNPARARERLKNIERI 60

Query: 45  CNTLNPLVLPEYLIHAFFCVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPT 104
           C  L  LV+PEY IH  FC+MFLCAAEW+TLGLN+PLL YH+WRY  RP      +YD  
Sbjct: 61  CCLLRKLVVPEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAV 120

Query: 105 TIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIYVLVS 143
           +IMNADIL YCQKE WCKLAFYLL+FFYYLY M+Y LVS
Sbjct: 121 SIMNADILNYCQKESWCKLAFYLLSFFYYLYSMVYTLVS 159


>gi|7661824 cornichon homolog 4 [Homo sapiens]
          Length = 139

 Score = 98.2 bits (243), Expect = 2e-21
 Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 1/137 (0%)

Query: 7   AFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMF 66
           A  ++ +LL   ALIF +++ II   +L+ DY N    C+ LN  V+PE + H    V+ 
Sbjct: 3   AVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLL 62

Query: 67  LCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFY 126
           L +  W    LN+P+  ++I+RY+  P     G++DPT I N   L    KE   KL F+
Sbjct: 63  LMSLHWFIFLLNLPVATWNIYRYIMVP-SGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFH 121

Query: 127 LLAFFYYLYGMIYVLVS 143
           LL FF YLY MI  L++
Sbjct: 122 LLCFFMYLYSMILALIN 138


>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
          Length = 4471

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 84   YHIWRYMSRP-VMSGPGLYDPTTIMNADILAYCQKEGW 120
            Y +W   S P VM   GL+ P + + A + A C+K GW
Sbjct: 4311 YMLWVTESEPSVMWLSGLHIPESYLTALVQATCRKNGW 4348


>gi|223972690 adenosine deaminase domain containing 2 isoform 2
           [Homo sapiens]
          Length = 583

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 70  AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNA--------DILAYCQKEGWC 121
           A W  LGL   LLA+ +    S  ++     +DP T+  A         +L  C    + 
Sbjct: 401 ARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCLPPPYV 460

Query: 122 KLAFYLLA 129
           + A +L A
Sbjct: 461 RTALHLFA 468


>gi|223972688 adenosine deaminase domain containing 2 isoform 1
           [Homo sapiens]
          Length = 665

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 70  AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNA--------DILAYCQKEGWC 121
           A W  LGL   LLA+ +    S  ++     +DP T+  A         +L  C    + 
Sbjct: 483 ARWAVLGLGGALLAHLVSPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPCLPPPYV 542

Query: 122 KLAFYLLA 129
           + A +L A
Sbjct: 543 RTALHLFA 550


>gi|52421343 olfactory receptor, family 52, subfamily A, member 4
           [Homo sapiens]
          Length = 304

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 125 FYLLAFFYYLYGMIYVL 141
           FYLLAFF+  Y  I++L
Sbjct: 256 FYLLAFFFIFYSQIWIL 272


>gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like
           domains 1 [Homo sapiens]
          Length = 1138

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 70  AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADI---LAYCQKEGW 120
           +E +TL    P   Y +   +SRP   G G + P T+M  D    L     EGW
Sbjct: 501 SENVTLMNLRPKTGYSVRVQLSRPGEGGEGAWGPPTLMTTDCPEPLLQPWLEGW 554


>gi|170932505 neuromedin U receptor 2 [Homo sapiens]
          Length = 415

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 67  LCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGP-GLYDPTTI 106
           L  ++ L L L MPL  Y +WR  + P + GP G Y  T +
Sbjct: 87  LAVSDLLVLLLGMPLEVYEMWR--NYPFLFGPVGCYFKTAL 125


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.335    0.145    0.498 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,366,072
Number of Sequences: 37866
Number of extensions: 216223
Number of successful extensions: 672
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 664
Number of HSP's gapped (non-prelim): 10
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.