Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CAPZB Sequence: fasta or formatted (272aa) NCBI GI: 4826659
Description:

F-actin capping protein beta subunit

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         13           1
 C cysteine            2.2          6           1
 D aspartate           9.6         26           1
 E glutamate           5.5         15           1
 F phenylalanine       1.8          5           1
 G glycine             6.6         18           2
 H histidine           1.5          4           1
 I isoleucine          4.4         12           1
 K lysine              8.5         23           2
 L leucine            11.4         31           2
 M methionine          2.6          7           1
 N asparagine          4.4         12           2
 P proline             3.3          9           2
 Q glutamine           4.8         13           2
 R arginine            5.1         14           2
 S serine              8.8         24           2
 T threonine           3.7         10           1
 V valine              6.2         17           2
 W tryptophan          1.5          4           1
 Y tyrosine            3.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-actin capping protein beta subunit 
LOC644265             0.183   PREDICTED: similar to hCG1793552 
LOC644265             0.183   PREDICTED: similar to F-actin capping protein beta ...
LOC644265             0.183   PREDICTED: similar to hCG1793552 
KIF2B                 0.013   kinesin family member 2B 
PPM1H                 0.008   protein phosphatase 1H (PP2C domain containing) [Ho...
TCP11L1               0.008   t-complex 11 (mouse) like 1 
TCP11L1               0.008   t-complex 11 (mouse) like 1 
LOC100290395          0.008   PREDICTED: hypothetical protein XP_002346998 
MYH15                 0.008   myosin, heavy polypeptide 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press