Search of human proteins with 4758100

Search of human proteins with 4758100

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758100 hypothetical protein LOC9142 [Homo sapiens]
         (111 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758100 hypothetical protein LOC9142 [Homo sapiens]                233   3e-62
gi|14211849 putative purinergic receptor FKSG79 [Homo sapiens]         27   2.7  
gi|239753343 PREDICTED: hypothetical protein [Homo sapiens]            27   4.6  
gi|239747910 PREDICTED: hypothetical protein XP_002346478 [Homo ...    27   4.6  
gi|239741805 PREDICTED: hypothetical protein XP_002342319 [Homo ...    27   4.6  
gi|170784865 CAS1 domain containing 1 [Homo sapiens]                   27   4.6  
gi|45505180 per1-like domain containing 1 [Homo sapiens]               26   6.0  
gi|8394395 taste receptor T2R16 [Homo sapiens]                         26   6.0  
gi|52317094 olfactory receptor, family 4, subfamily N, member 5 ...    26   6.0  
gi|217035140 zinc finger protein 669 isoform 2 [Homo sapiens]          26   7.8  
gi|217035138 zinc finger protein 669 isoform 1 [Homo sapiens]          26   7.8  
gi|53793658 olfactory receptor, family 10, subfamily A, member 3...    26   7.8  

>gi|4758100 hypothetical protein LOC9142 [Homo sapiens]
          Length = 111

 Score =  233 bits (593), Expect = 3e-62
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MYSRLFYLKSSYIIYFEPLFSNAIINILSFINSLASPLTIFCFALSAQALSTIFYFRIFI 60
           MYSRLFYLKSSYIIYFEPLFSNAIINILSFINSLASPLTIFCFALSAQALSTIFYFRIFI
Sbjct: 1   MYSRLFYLKSSYIIYFEPLFSNAIINILSFINSLASPLTIFCFALSAQALSTIFYFRIFI 60

Query: 61  FIFHSWILLFHFYFTCSFKTYEHQHSKMVPAYRMQSPRALPRTYLYVWPYK 111
           FIFHSWILLFHFYFTCSFKTYEHQHSKMVPAYRMQSPRALPRTYLYVWPYK
Sbjct: 61  FIFHSWILLFHFYFTCSFKTYEHQHSKMVPAYRMQSPRALPRTYLYVWPYK 111


>gi|14211849 putative purinergic receptor FKSG79 [Homo sapiens]
          Length = 333

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 38  LTIFCFALSAQALSTIFYFRIFIFIFHSWILLFHFYF 74
           L +FCF L    +    YF + I +   W L++ F F
Sbjct: 90  LCMFCFYLKYVNMYASIYFLVCISVRRFWFLMYPFRF 126


>gi|239753343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 19 LFSNAIINILSFINSLASPLTIFCFAL-SAQALSTIFYFRIFIFIFHSWIL 68
          +FS+ + +  SF  SL + L   C+ L S+ + S  F+ ++  +I+ S +L
Sbjct: 49 MFSSDLSSYPSFSKSLLATLLASCYTLQSSSSQSPDFFLKVAYYIYISLLL 99


>gi|239747910 PREDICTED: hypothetical protein XP_002346478 [Homo
          sapiens]
          Length = 155

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 19 LFSNAIINILSFINSLASPLTIFCFAL-SAQALSTIFYFRIFIFIFHSWIL 68
          +FS+ + +  SF  SL + L   C+ L S+ + S  F+ ++  +I+ S +L
Sbjct: 49 MFSSDLSSYPSFSKSLLATLLASCYTLQSSSSQSPDFFLKVAYYIYISLLL 99


>gi|239741805 PREDICTED: hypothetical protein XP_002342319 [Homo
          sapiens]
          Length = 155

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 19 LFSNAIINILSFINSLASPLTIFCFAL-SAQALSTIFYFRIFIFIFHSWIL 68
          +FS+ + +  SF  SL + L   C+ L S+ + S  F+ ++  +I+ S +L
Sbjct: 49 MFSSDLSSYPSFSKSLLATLLASCYTLQSSSSQSPDFFLKVAYYIYISLLL 99


>gi|170784865 CAS1 domain containing 1 [Homo sapiens]
          Length = 797

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 17  EPLFSNAIINILSFINSLASPLTIFCFALSAQ 48
           EPLFSN I N L FI S+ S LT   +A S +
Sbjct: 632 EPLFSNKISNFLLFI-SVVSFLTYSIWASSCK 662


>gi|45505180 per1-like domain containing 1 [Homo sapiens]
          Length = 320

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 30/109 (27%)

Query: 10  SSYIIYFEPLFSNAIINILSFINSLAS---------------PLTIFCFALSAQALSTIF 54
           S ++ + EP  +     + SF+N LAS               P+   C A +  +L+  F
Sbjct: 97  SRFLFFQEPASA-----VASFLNGLASLVMLCRYRTFVPASSPMYHTCVAFAWVSLNAWF 151

Query: 55  YFRIF----------IFIFHSWILLFHFYFTCSFKTYEHQHSKMVPAYR 93
           +  +F          +  F +  ++ H  + C  +T   QH  +V A+R
Sbjct: 152 WSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFR 200


>gi|8394395 taste receptor T2R16 [Homo sapiens]
          Length = 291

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 2   YSRLFYLKSSYIIYFEPLFSNAIINILSF-INSLASPLTIF-CFALSAQALSTIFYFRIF 59
           Y  L Y+  +  I +E        NIL+F +NSL   LT+F C  +S+       + R  
Sbjct: 71  YFNLNYVLCNLTITWE------FFNILTFWLNSL---LTVFYCIKVSSFTHHIFLWLRWR 121

Query: 60  IFIFHSWILLFHFYFTC 76
           I     WILL     TC
Sbjct: 122 ILRLFPWILLGSLMITC 138


>gi|52317094 olfactory receptor, family 4, subfamily N, member 5
           [Homo sapiens]
          Length = 308

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 9/78 (11%)

Query: 10  SSYIIYFEPLFSNAIINILSFINSLASPLTIFCFAL------SAQALSTIFYFRIFIFIF 63
           +++++    + ++ ++++L F+  LAS   I C          ++A+ST     I IF+ 
Sbjct: 191 NTFVVELLMVSNSGLLSLLCFLGLLASYAVILCRIREHSSEGKSKAISTCTTHIIIIFLM 250

Query: 64  HSWILLFHFYFTCSFKTY 81
               +   F +TC F+ +
Sbjct: 251 FGPAI---FIYTCPFQAF 265


>gi|217035140 zinc finger protein 669 isoform 2 [Homo sapiens]
          Length = 378

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 72  FYFTCSFKTYEHQHS 86
           F F+CSFKT+E  H+
Sbjct: 229 FRFSCSFKTHERTHT 243


>gi|217035138 zinc finger protein 669 isoform 1 [Homo sapiens]
          Length = 464

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 72  FYFTCSFKTYEHQHS 86
           F F+CSFKT+E  H+
Sbjct: 315 FRFSCSFKTHERTHT 329


>gi|53793658 olfactory receptor, family 10, subfamily A, member 3
          [Homo sapiens]
          Length = 314

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 13 IIYFEPLFSNAIINILSFIN-SLASPLTIFCFALSAQALS 51
          +IY   L  NAII ++  +N SL  P+ +F   LS   +S
Sbjct: 33 VIYVVTLMGNAIITVIISLNQSLHVPMYLFLLNLSVVEVS 72


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.337    0.144    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,753,547
Number of Sequences: 37866
Number of extensions: 125827
Number of successful extensions: 476
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 472
Number of HSP's gapped (non-prelim): 12
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.