Guide to the Human Genome
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Search of human proteins with 4557599

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557599 glucose-6-phosphatase, catalytic subunit [Homo
sapiens]
         (357 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557599 glucose-6-phosphatase, catalytic subunit [Homo sapiens]    736   0.0  
gi|10863975 islet-specific glucose-6-phosphatase-related protein...   373   e-103
gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo sapi...   216   3e-56
gi|126273546 islet-specific glucose-6-phosphatase-related protei...   164   9e-41
gi|13540569 sphingosine-1-phosphate phosphatase 1 [Homo sapiens]       41   0.001
gi|23510289 sphingosine-1-phosphate phosphotase 2 [Homo sapiens]       37   0.035
gi|5174445 lanthionine synthetase C-like protein 1 [Homo sapiens]      30   2.5  
gi|212274477 lanthionine synthetase C-like protein 1 [Homo sapiens]    30   2.5  
gi|212274337 lanthionine synthetase C-like protein 1 [Homo sapiens]    30   2.5  
gi|156104869 chloride channel 2 [Homo sapiens]                         30   2.5  
gi|51921275 olfactory receptor, family 52, subfamily M, member 1...    29   5.7  
gi|42822887 Duffy blood group antigen isoform b [Homo sapiens]         28   9.7  
gi|171846251 Duffy blood group antigen isoform a [Homo sapiens]        28   9.7  
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F...    28   9.7  
gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]        28   9.7  
gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens]        28   9.7  
gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens]        28   9.7  
gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens]          28   9.7  

>gi|4557599 glucose-6-phosphatase, catalytic subunit [Homo sapiens]
          Length = 357

 Score =  736 bits (1899), Expect = 0.0
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MEEGMNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 60
           MEEGMNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK
Sbjct: 1   MEEGMNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 60

Query: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 120
           LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 120

Query: 121 MGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQ 180
           MGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQ
Sbjct: 121 MGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQ 180

Query: 181 VVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEK 240
           VVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEK
Sbjct: 181 VVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEK 240

Query: 241 AQRWCEQPEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIV 300
           AQRWCEQPEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIV
Sbjct: 241 AQRWCEQPEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIV 300

Query: 301 ASLVLLHVFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQPHKKSL 357
           ASLVLLHVFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQPHKKSL
Sbjct: 301 ASLVLLHVFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQPHKKSL 357


>gi|10863975 islet-specific glucose-6-phosphatase-related protein
           isoform 1 [Homo sapiens]
          Length = 355

 Score =  373 bits (958), Expect = e-103
 Identities = 179/355 (50%), Positives = 237/355 (66%), Gaps = 4/355 (1%)

Query: 5   MNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 64
           M+ LH  G+    +LQ +Y+    +   +S + D RN F++ FP+ F   + VG K++WV
Sbjct: 1   MDFLHRNGVLIIQHLQKDYRAYYTFLNFMSNVGDPRNIFFIYFPLCFQFNQTVGTKMIWV 60

Query: 65  AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 124
           AVIGDWLNL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG +
Sbjct: 61  AVIGDWLNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGAS 120

Query: 125 GVYYVMVTSTLS---IFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQV 181
            V+YVMVT+ LS       K   T   R     LW  FW +Q++VC+SR+++A HFPHQV
Sbjct: 121 CVWYVMVTAALSHTVCGMDKFSITLH-RLTWSFLWSVFWLIQISVCISRVFIATHFPHQV 179

Query: 182 VAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKA 241
           + GV+ G+ V E F H   I  ASL  Y     FLF FA+GFYLLL+ L +DLLW++  A
Sbjct: 180 ILGVIGGMLVAEAFEHTPGIQTASLGTYLKTNLFLFLFAVGFYLLLRVLNIDLLWSVPIA 239

Query: 242 QRWCEQPEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIVA 301
           ++WC  P+W+HIDTTPFA L++NLG LFGLG A+NS M+  SC+G  +  L FRL   + 
Sbjct: 240 KKWCANPDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLLSCRGGNNYTLSFRLLCALT 299

Query: 302 SLVLLHVFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQPHKKS 356
           SL +L ++  L+ P+  E +FYVLSFCKSA +PL  V+ IPY +  ++ Q  KKS
Sbjct: 300 SLTILQLYHFLQIPTHEEHLFYVLSFCKSASIPLTVVAFIPYSVHMLMKQSGKKS 354


>gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo
           sapiens]
          Length = 346

 Score =  216 bits (549), Expect = 3e-56
 Identities = 120/334 (35%), Positives = 187/334 (55%), Gaps = 9/334 (2%)

Query: 12  GIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 71
           GI     LQ      ++ ++ ++ + D +  F   FP  ++    VGI +LW+++I +WL
Sbjct: 8   GIVIAEALQNQLAWLENVWLWITFLGDPKILFLFYFPAAYYASRRVGIAVLWISLITEWL 67

Query: 72  NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 131
           NL+FKW LFG RP+WWV ++ YYS      + QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLIFKWFLFGDRPFWWVHESGYYSQAPAQ-VHQFPSSCETGPGSPSGHCMITGAALWPIM 126

Query: 132 TSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAV 191
           T+  S    ++    R R + V+  L +    L V LSRI++ AHFPHQV+AG+++G AV
Sbjct: 127 TALSS----QVATRARSRWVRVMPSLAYCTFLLAVGLSRIFILAHFPHQVLAGLITG-AV 181

Query: 192 TETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKAQRWCEQPEWV 251
                         L  Y L    L       Y  L  LG+DL W++  A +WCE+PEW+
Sbjct: 182 LGWLMTPRVPMERELSFYGLTALALMLGTSLIYWTLFTLGLDLSWSISLAFKWCERPEWI 241

Query: 252 HIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIVASLVLLHVFDS 311
           H+D+ PFASL ++ G   GLG+AL+S  Y +  + +L      +++ +V ++ LL   D 
Sbjct: 242 HVDSRPFASLSRDSGAALGLGIALHSPCYAQVRRAQLGNGQ--KIACLVLAMGLLGPLDW 299

Query: 312 LKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCL 345
           L  P Q+ L FY+ +F K  + P   ++++P+ +
Sbjct: 300 LGHPPQISL-FYIFNFLKYTLWPCLVLALVPWAV 332


>gi|126273546 islet-specific glucose-6-phosphatase-related protein
           isoform 2 [Homo sapiens]
          Length = 154

 Score =  164 bits (416), Expect = 9e-41
 Identities = 73/132 (55%), Positives = 94/132 (71%)

Query: 5   MNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 64
           M+ LH  G+    +LQ +Y+    +   +S + D RN F++ FP+ F   + VG K++WV
Sbjct: 1   MDFLHRNGVLIIQHLQKDYRAYYTFLNFMSNVGDPRNIFFIYFPLCFQFNQTVGTKMIWV 60

Query: 65  AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 124
           AVIGDWLNL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG +
Sbjct: 61  AVIGDWLNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGAS 120

Query: 125 GVYYVMVTSTLS 136
            V+YVMVT+ LS
Sbjct: 121 CVWYVMVTAALS 132


>gi|13540569 sphingosine-1-phosphate phosphatase 1 [Homo sapiens]
          Length = 441

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 43  FYVLF-PIW-FHLQEAVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVP 100
           FY+LF P W ++L   VG +L+ + V+  +L    K I+   RP             S P
Sbjct: 143 FYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRP------------ASPP 190

Query: 101 LIKQFPVTCETGPGSPSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFW 160
           ++K   V   +    PS HAM    +   MV  T   +Q        +  +  ++ +  W
Sbjct: 191 VVK-LEVFYNSEYSMPSTHAMSGTAIPISMVLLTYGRWQ--------YPLIYGLILIPCW 241

Query: 161 AVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVTETF 195
                VCLSRIY+  H    ++AG L  I +   F
Sbjct: 242 CSL--VCLSRIYMGMHSILDIIAGFLYTILILAVF 274


>gi|23510289 sphingosine-1-phosphate phosphotase 2 [Homo sapiens]
          Length = 399

 Score = 36.6 bits (83), Expect = 0.035
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 25/149 (16%)

Query: 40  RNAFYVLFPIWFH--LQEAVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNT 97
           +  FY+ F  + H  +   +  +L+ + V+  ++  V K +L   RP             
Sbjct: 98  QEVFYITFLPFTHWNIDPYLSRRLIIIWVLVMYIGQVAKDVLKWPRP------------- 144

Query: 98  SVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWL 157
           S P + +         G PS HAM    + + ++ ST+  +Q      Y F  L +++ +
Sbjct: 145 SSPPVVKLEKRLIAEYGMPSTHAMAATAIAFTLLISTMDRYQ------YPF-VLGLVMAV 197

Query: 158 GFWAVQLNVCLSRIYLAAHFPHQVVAGVL 186
            F  +   VCLSR+Y   H    V+ GVL
Sbjct: 198 VFSTL---VCLSRLYTGMHTVLDVLGGVL 223


>gi|5174445 lanthionine synthetase C-like protein 1 [Homo sapiens]
          Length = 399

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 118 GHAMGTAGVYYVMVTSTLSIFQGK----IKPTYRFRC 150
           G A G AG+YY ++  +L + QGK    +KP+  + C
Sbjct: 216 GAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVC 252


>gi|212274477 lanthionine synthetase C-like protein 1 [Homo sapiens]
          Length = 399

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 118 GHAMGTAGVYYVMVTSTLSIFQGK----IKPTYRFRC 150
           G A G AG+YY ++  +L + QGK    +KP+  + C
Sbjct: 216 GAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVC 252


>gi|212274337 lanthionine synthetase C-like protein 1 [Homo sapiens]
          Length = 399

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 118 GHAMGTAGVYYVMVTSTLSIFQGK----IKPTYRFRC 150
           G A G AG+YY ++  +L + QGK    +KP+  + C
Sbjct: 216 GAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVC 252


>gi|156104869 chloride channel 2 [Homo sapiens]
          Length = 898

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 21/124 (16%)

Query: 101 LIKQFPVTCETGPGSPSGHA---MGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWL 157
           + K   +TC  G G P G     +  A +   +++  LS+F G     Y     N  +  
Sbjct: 186 IAKVIGLTCALGSGMPLGKEGPFVHIASMCAALLSKFLSLFGG----IYENESRNTEMLA 241

Query: 158 GFWAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLF 217
              AV +  C +            + GVL  I VT TF  + + +    + +F  TF  F
Sbjct: 242 AACAVGVGCCFAA----------PIGGVLFSIEVTSTFFAVRNYW----RGFFAATFSAF 287

Query: 218 SFAI 221
            F +
Sbjct: 288 IFRV 291


>gi|51921275 olfactory receptor, family 52, subfamily M, member 1
           [Homo sapiens]
          Length = 317

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 23/131 (17%)

Query: 116 PSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNV----------------ILWLGF 159
           P G     A V  V + + + I +   +P Y F C+                  I W G 
Sbjct: 32  PFGSMYLVAVVGNVTILAVVKIERSLHQPMYFFLCMLAAIDLVLSTSTIPKLLGIFWFGA 91

Query: 160 WAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSF 219
             + L+ CL +++L   F     A V SGI +   F    +I N  L+   ++T+ +   
Sbjct: 92  CDIGLDACLGQMFLIHCF-----ATVESGIFLAMAFDRYVAICN-PLRHSMVLTYTVVG- 144

Query: 220 AIGFYLLLKGL 230
            +G   LL+G+
Sbjct: 145 RLGLVSLLRGV 155


>gi|42822887 Duffy blood group antigen isoform b [Homo sapiens]
          Length = 336

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 11/65 (16%)

Query: 42  AFYVLFPIWFHLQEAVGIKLLWVAVIGDWLNLVFKWILFGQRPYWW----VLDTDYYSNT 97
           A +VL P+   L  A G+K       G W+N+++ W +F     WW    VL  D+   +
Sbjct: 216 AIFVLLPLG--LFGAKGLKKALGMGPGPWMNILWAWFIF-----WWPHGVVLGLDFLVRS 268

Query: 98  SVPLI 102
            + L+
Sbjct: 269 KLLLL 273


>gi|171846251 Duffy blood group antigen isoform a [Homo sapiens]
          Length = 338

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 11/65 (16%)

Query: 42  AFYVLFPIWFHLQEAVGIKLLWVAVIGDWLNLVFKWILFGQRPYWW----VLDTDYYSNT 97
           A +VL P+   L  A G+K       G W+N+++ W +F     WW    VL  D+   +
Sbjct: 218 AIFVLLPLG--LFGAKGLKKALGMGPGPWMNILWAWFIF-----WWPHGVVLGLDFLVRS 270

Query: 98  SVPLI 102
            + L+
Sbjct: 271 KLLLL 275


>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
            subunit [Homo sapiens]
          Length = 1977

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 177  FPHQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFF-LFSFAIGFYLLLKGLGV-DL 234
            F   +V G +  IAVTE  +  H   ++       ITFF LF       LL KG G+  L
Sbjct: 1257 FDALIVVGSIVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTL 1316

Query: 235  LWTLEKA 241
            LWT  K+
Sbjct: 1317 LWTFIKS 1323


>gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 179 HQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKG-LGVDLLWT 237
           H VV   L      +   H+H +    L +Y  +TF    F +GF ++L   LG  LL+ 
Sbjct: 218 HLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFV 277

Query: 238 LEKAQRWCEQPEWVHID 254
           L  A       EW   D
Sbjct: 278 LYLAATNQTTNEWYRGD 294


>gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 179 HQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKG-LGVDLLWT 237
           H VV   L      +   H+H +    L +Y  +TF    F +GF ++L   LG  LL+ 
Sbjct: 218 HLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFV 277

Query: 238 LEKAQRWCEQPEWVHID 254
           L  A       EW   D
Sbjct: 278 LYLAATNQTTNEWYRGD 294


>gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 179 HQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKG-LGVDLLWT 237
           H VV   L      +   H+H +    L +Y  +TF    F +GF ++L   LG  LL+ 
Sbjct: 218 HLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFV 277

Query: 238 LEKAQRWCEQPEWVHID 254
           L  A       EW   D
Sbjct: 278 LYLAATNQTTNEWYRGD 294


>gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 179 HQVVAGVLSGIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKG-LGVDLLWT 237
           H VV   L      +   H+H +    L +Y  +TF    F +GF ++L   LG  LL+ 
Sbjct: 218 HLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFV 277

Query: 238 LEKAQRWCEQPEWVHID 254
           L  A       EW   D
Sbjct: 278 LYLAATNQTTNEWYRGD 294


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.141    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,263,968
Number of Sequences: 37866
Number of extensions: 548956
Number of successful extensions: 1471
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1457
Number of HSP's gapped (non-prelim): 18
length of query: 357
length of database: 18,247,518
effective HSP length: 103
effective length of query: 254
effective length of database: 14,347,320
effective search space: 3644219280
effective search space used: 3644219280
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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