BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4557263 ADP-ribosylarginine hydrolase [Homo sapiens] (357 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4557263 ADP-ribosylarginine hydrolase [Homo sapiens] 744 0.0 gi|21702735 ADP-ribosylhydrolase like 1 isoform 1 [Homo sapiens] 309 2e-84 gi|40316946 ADP-ribosylhydrolase like 1 isoform 2 [Homo sapiens] 250 1e-66 gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens] 32 0.87 gi|239743879 PREDICTED: hypothetical protein XP_002342985 [Homo ... 30 2.5 gi|7706671 peroxisomal biogenesis factor 5-like [Homo sapiens] 30 2.5 gi|42476130 ubiquitin interaction motif containing 1 [Homo sapiens] 29 7.4 gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 28 9.7 gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 28 9.7 gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 28 9.7 gi|197313787 desmoglein 4 isoform 1 [Homo sapiens] 28 9.7 gi|29789445 desmoglein 4 isoform 2 [Homo sapiens] 28 9.7 >gi|4557263 ADP-ribosylarginine hydrolase [Homo sapiens] Length = 357 Score = 744 bits (1920), Expect = 0.0 Identities = 357/357 (100%), Positives = 357/357 (100%) Query: 1 MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLDALDVGRWRVSDDTVMH 60 MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLDALDVGRWRVSDDTVMH Sbjct: 1 MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLDALDVGRWRVSDDTVMH 60 Query: 61 LATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPNGWRI 120 LATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPNGWRI Sbjct: 61 LATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPNGWRI 120 Query: 121 PFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTA 180 PFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTA Sbjct: 121 PFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTA 180 Query: 181 YAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGE 240 YAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGE Sbjct: 181 YAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGE 240 Query: 241 SAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFFHG 300 SAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFFHG Sbjct: 241 SAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFFHG 300 Query: 301 GDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSKEDTVISL 357 GDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSKEDTVISL Sbjct: 301 GDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSKEDTVISL 357 >gi|21702735 ADP-ribosylhydrolase like 1 isoform 1 [Homo sapiens] Length = 354 Score = 309 bits (792), Expect = 2e-84 Identities = 163/355 (45%), Positives = 224/355 (63%), Gaps = 6/355 (1%) Query: 1 MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLD--ALDVGRWRVSDDTV 58 MEK+ AAM+L + GDALGY N E G KI +L + GGLD L G W VSD+T+ Sbjct: 1 MEKFKAAMLLGSVGDALGYRNVCKENSTVGMKIQEELQRSGGLDHLVLSPGEWPVSDNTI 60 Query: 59 MHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPN-G 117 MH+ATAEAL L LY + + Y + +E + R P A++ QLKP Sbjct: 61 MHIATAEALTTDYWC--LDDLYREMVRCYVEIVEKLPERRPDPATIEGCAQLKPNNYLLA 118 Query: 118 WRIPFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASAL 177 W PFN G GAA +AMCIGLR+ +L+TLI+VS+E GRMTH+HPTG+LG+L +AL Sbjct: 119 WHTPFNEKGSGFGAATKAMCIGLRYWKPERLETLIEVSVECGRMTHNHPTGFLGSLCTAL 178 Query: 178 FTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGI- 236 F ++A +P +QWG+ ++ +P A++Y ++ E +HW YF+ KW+ YL+ R I Sbjct: 179 FVSFAAQGKPLVQWGRDMLRAVPLAEEYCRKTIRHTAEYQEHWFYFEAKWQFYLEERKIS 238 Query: 237 LDGESAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRA 296 D E+ FP+++ +ER++ Y S G GG GHDAPMIAYDA+LAAG+SW EL HRA Sbjct: 239 KDSENKAIFPDNYDAEEREKTYRKWSSEGRGGRRGHDAPMIAYDALLAAGNSWTELCHRA 298 Query: 297 FFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSKE 351 FHGG+S +T IAGC +G++YG V Y+ LE + +LE+ ALY L ++E Sbjct: 299 MFHGGESAATGTIAGCLFGLLYGLDLVPKGLYQDLEDKEKLEDLGAALYRLSTEE 353 >gi|40316946 ADP-ribosylhydrolase like 1 isoform 2 [Homo sapiens] Length = 272 Score = 250 bits (639), Expect = 1e-66 Identities = 122/271 (45%), Positives = 175/271 (64%), Gaps = 2/271 (0%) Query: 83 LAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPN-GWRIPFNSHEGGCGAAMRAMCIGLR 141 + + Y + +E + R P A++ QLKP W PFN G GAA +AMCIGLR Sbjct: 1 MVRCYVEIVEKLPERRPDPATIEGCAQLKPNNYLLAWHTPFNEKGSGFGAATKAMCIGLR 60 Query: 142 FPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPE 201 + +L+TLI+VS+E GRMTH+HPTG+LG+L +ALF ++A +P +QWG+ ++ +P Sbjct: 61 YWKPERLETLIEVSVECGRMTHNHPTGFLGSLCTALFVSFAAQGKPLVQWGRDMLRAVPL 120 Query: 202 AKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGI-LDGESAPTFPESFGVKERDQFYTS 260 A++Y ++ E +HW YF+ KW+ YL+ R I D E+ FP+++ +ER++ Y Sbjct: 121 AEEYCRKTIRHTAEYQEHWFYFEAKWQFYLEERKISKDSENKAIFPDNYDAEEREKTYRK 180 Query: 261 LSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGF 320 S G GG GHDAPMIAYDA+LAAG+SW EL HRA FHGG+S +T IAGC +G++YG Sbjct: 181 WSSEGRGGRRGHDAPMIAYDALLAAGNSWTELCHRAMFHGGESAATGTIAGCLFGLLYGL 240 Query: 321 KGVSPSNYEKLEYRNRLEETARALYSLGSKE 351 V Y+ LE + +LE+ ALY L ++E Sbjct: 241 DLVPKGLYQDLEDKEKLEDLGAALYRLSTEE 271 >gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens] Length = 363 Score = 32.0 bits (71), Expect = 0.87 Identities = 71/319 (22%), Positives = 120/319 (37%), Gaps = 54/319 (16%) Query: 54 SDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMD-GRAPGGASVHNAMQLKP 112 +DDT M A ALV++ A + + + Q+ +D D G G +V + L P Sbjct: 76 TDDTAM----ARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKL-LNP 130 Query: 113 GKPNGW---RIPFNSHEG-GCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTG 168 + + R FN G G AMR I L + S + + + + S ++TH G Sbjct: 131 KCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAY---SSVQDVQKFARLSAQLTHASSLG 187 Query: 169 YLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWE 228 Y GA+ AL A+ S +F+++ L H + + Sbjct: 188 YNGAILQALAVHLALQGES--------------------SSEHFLKQLLGHMEDLEGDAQ 227 Query: 229 NYLKLRGILDGESAPTFPESFGVKERDQFYTSLSYS--------GWGGSSGHDAPMIAY- 279 + L R + E P S +K+ + S + G G ++ P Y Sbjct: 228 SVLDARELGMEER----PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYC 283 Query: 280 --------DAVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKL 331 + +A +S + + GGD+D+ A +AG G YG V S + Sbjct: 284 FLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSC 343 Query: 332 EYRNRLEETARALYSLGSK 350 E + A++L+ + K Sbjct: 344 EGYEETDILAQSLHRVFQK 362 >gi|239743879 PREDICTED: hypothetical protein XP_002342985 [Homo sapiens] Length = 216 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Query: 92 EDMDGRAPGGASVHNAMQLKPGKPNGWRIPFNSHEGGCGAAMRAMCIGLRFPHHSQ 147 ED DG PG + + G P+GW P+ C A C G P Q Sbjct: 72 EDGDGEGPGDVTA--GVSRAAGSPSGWEAPWVQQPRCCRRATPVCCAGQGPPRSLQ 125 >gi|7706671 peroxisomal biogenesis factor 5-like [Homo sapiens] Length = 626 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/80 (18%), Positives = 32/80 (40%) Query: 190 QWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGESAPTFPESF 249 +WG L+ ++ ++ VE + + W Q +WE + I + + A Sbjct: 250 RWGSALLSRNHSLEEEFERAKAAVESDTEFWDKMQAEWEEMARRNWISENQEAQNQVTIS 309 Query: 250 GVKERDQFYTSLSYSGWGGS 269 ++ F+T + W G+ Sbjct: 310 ASEKGYYFHTENPFKDWPGA 329 >gi|42476130 ubiquitin interaction motif containing 1 [Homo sapiens] Length = 719 Score = 28.9 bits (63), Expect = 7.4 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 11/146 (7%) Query: 193 KGLMELLPEA--KKYIVQSGYFVEENLQHWSYFQ-TKWENYLKLRGILDGESAPTFPESF 249 +G+ +L+P + K + G EE + W + + T+ E G D S P F E+ Sbjct: 154 EGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTEKTEEEPVSGSSGSWDQSSQPVF-ENV 212 Query: 250 GVKERDQFYT-SLSYSGWGG---SSGHDAPMIAYDAVLAAGDSWKELAHRAFFHGGDSDS 305 VK D+ S ++ G S+G + + AV +GD+ + G D Sbjct: 213 NVKSFDRCTGHSAEHTQCGKPQESTGRGSAFLK--AVQGSGDTSRHCLPTLADAKGLQD- 269 Query: 306 TAAIAGCWWGVMYGFKGVSPSNYEKL 331 T +WG+ + GV P+ Y K+ Sbjct: 270 TGGTVNYFWGIPFCPDGVDPNQYTKV 295 >gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] Length = 3874 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 40 LGGLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLL 83 L G L +GR R+SD + T EAL AG+ KL QL L+ Sbjct: 1796 LPGTHTLQLGRARLSDSGMY---TCEALNAAGRDQKLVQLSVLV 1836 >gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] Length = 5065 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 40 LGGLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLL 83 L G L +GR R+SD + T EAL AG+ KL QL L+ Sbjct: 2987 LPGTHTLQLGRARLSDSGMY---TCEALNAAGRDQKLVQLSVLV 3027 >gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] Length = 3783 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 40 LGGLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLL 83 L G L +GR R+SD + T EAL AG+ KL QL L+ Sbjct: 1705 LPGTHTLQLGRARLSDSGMY---TCEALNAAGRDQKLVQLSVLV 1745 >gi|197313787 desmoglein 4 isoform 1 [Homo sapiens] Length = 1059 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%) Query: 204 KYIVQSGYFVEENLQHWSYFQTKW---ENYLKLRGILDGESAPTFPESFGVKERDQFYTS 260 +Y++ SG N +W QT E LK+ +LD E AP S GVK + F+ S Sbjct: 306 QYLILSG-----NDGNWFDIQTDPQTNEGILKVVKMLDYEQAPNIQLSIGVKNQADFHYS 360 Query: 261 LS 262 ++ Sbjct: 361 VA 362 >gi|29789445 desmoglein 4 isoform 2 [Homo sapiens] Length = 1040 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%) Query: 204 KYIVQSGYFVEENLQHWSYFQTKW---ENYLKLRGILDGESAPTFPESFGVKERDQFYTS 260 +Y++ SG N +W QT E LK+ +LD E AP S GVK + F+ S Sbjct: 306 QYLILSG-----NDGNWFDIQTDPQTNEGILKVVKMLDYEQAPNIQLSIGVKNQADFHYS 360 Query: 261 LS 262 ++ Sbjct: 361 VA 362 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,354,669 Number of Sequences: 37866 Number of extensions: 643275 Number of successful extensions: 1485 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1473 Number of HSP's gapped (non-prelim): 14 length of query: 357 length of database: 18,247,518 effective HSP length: 103 effective length of query: 254 effective length of database: 14,347,320 effective search space: 3644219280 effective search space used: 3644219280 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.