Search of human proteins with 13027378

Search of human proteins with 13027378

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]
         (289 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]        592   e-169
gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]        507   e-144
gi|6912586 6-phosphogluconolactonase [Homo sapiens]                    40   0.002
gi|239753928 PREDICTED: hypothetical protein [Homo sapiens]            28   7.2  
gi|116812610 apolipoprotein O-like [Homo sapiens]                      28   9.4  

>gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]
          Length = 289

 Score =  592 bits (1527), Expect = e-169
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGD 60
           MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGD
Sbjct: 1   MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGD 60

Query: 61  LSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDA 120
           LSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDA
Sbjct: 61  LSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDA 120

Query: 121 FEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTK 180
           FEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTK
Sbjct: 121 FEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTK 180

Query: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD 240
           VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD
Sbjct: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD 240

Query: 241 EDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKETEKSQSSKKPYSD 289
           EDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKETEKSQSSKKPYSD
Sbjct: 241 EDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKETEKSQSSKKPYSD 289


>gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]
          Length = 276

 Score =  507 bits (1305), Expect = e-144
 Identities = 241/274 (87%), Positives = 261/274 (95%)

Query: 1   MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGD 60
           M+L+IL++Y  ASEWAAKYI NRIIQF PG ++YFTLGLPTGSTPLGCYKKLIEY+KNG 
Sbjct: 1   MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGH 60

Query: 61  LSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDA 120
           LSFKYVKTFNMDEYVGLPR+HPESYHS+MWNNFFKHIDI P N HILDGNA DLQAECDA
Sbjct: 61  LSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDA 120

Query: 121 FEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTK 180
           FE KIK AGGI+LFVGGIGPDGHIAFNEPGSSLVSRTR+KTLAMDTILANA++FDG+L+K
Sbjct: 121 FENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSK 180

Query: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD 240
           VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRT+FVCD
Sbjct: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCD 240

Query: 241 EDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKE 274
           EDATLEL+VKTVKYFKGLM VHNKLVDPL+S+K+
Sbjct: 241 EDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKD 274


>gi|6912586 6-phosphogluconolactonase [Homo sapiens]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 19/185 (10%)

Query: 77  LPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGG------ 130
           +P DH ES +     +    + I PE+  I     + ++   + + +K++ A        
Sbjct: 83  VPFDHAESTYGLYRTHLLSRLPI-PESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPV 141

Query: 131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGV 190
            +L + G+GPDGH     P   L+ + R K +A  +          +  K P   +T+ +
Sbjct: 142 FDLLILGVGPDGHTCSLFPDHPLL-QEREKIVAPIS----------DSPKPPPQRVTLTL 190

Query: 191 GTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHP-RTVFVCDEDATLELKV 249
             +  AR V+ + TG  KA  L + +E+   +    +  Q H  +  +  DE A   L V
Sbjct: 191 PVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLLTV 250

Query: 250 KTVKY 254
              K+
Sbjct: 251 PFEKH 255


>gi|239753928 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1179

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 46   LGCYK-------KLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHID 98
            LGCY+       KL+ +++  +    + +  N+ E  G       S      N F  H++
Sbjct: 1047 LGCYRSDVKERSKLLNFFRYENRVSPWARMSNVKEVAGKVEYRQNS------NPFHSHME 1100

Query: 99   IHPENTHILDGNAVDLQA 116
            I  ENT   DG A  L A
Sbjct: 1101 IKIENTQKNDGFAAVLPA 1118


>gi|116812610 apolipoprotein O-like [Homo sapiens]
          Length = 268

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 139 GPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMAL---TVGVGTVMD 195
           G D ++    P    + +  V T++    L +AR   G   K  T  L   T+G      
Sbjct: 97  GKDAYVYLKNPPRDFLPKMGVITVSGLAGLVSAR--KGSKFKKITYPLGLATLGATVCYP 154

Query: 196 AREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQ---HPRTVFVCDEDATLELKVKTV 252
            + V+I    A K +A  + I   V  +WT S+ ++    P+        + +E+  KT 
Sbjct: 155 VQSVIIAKVTAKKVYATSQQIFGAVKSLWTKSSKEESLPKPKEKTKLGSSSEIEVPAKTT 214

Query: 253 KYFK 256
              K
Sbjct: 215 HVLK 218


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,954,151
Number of Sequences: 37866
Number of extensions: 481878
Number of successful extensions: 912
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 910
Number of HSP's gapped (non-prelim): 5
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.