Search of human proteins with 4504483

Search of human proteins with 4504483

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504483 hypoxanthine phosphoribosyltransferase 1 [Homo
sapiens]
         (218 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504483 hypoxanthine phosphoribosyltransferase 1 [Homo sapiens]    442   e-125
gi|9910262 phosphoribosyl transferase domain containing 1 [Homo ...   305   2e-83
gi|29570798 phosphoribosyl pyrophosphate amidotransferase propro...    31   0.71 
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]         28   4.6  
gi|4504811 junction plakoglobin [Homo sapiens]                         28   4.6  
gi|12056468 junction plakoglobin [Homo sapiens]                        28   4.6  
gi|15431293 ribosomal protein L15 [Homo sapiens]                       28   6.0  

>gi|4504483 hypoxanthine phosphoribosyltransferase 1 [Homo sapiens]
          Length = 218

 Score =  442 bits (1138), Expect = e-125
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 1   MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGH 60
           MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGH
Sbjct: 1   MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGH 60

Query: 61  HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD 120
           HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD
Sbjct: 61  HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGD 120

Query: 121 DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVG 180
           DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVG
Sbjct: 121 DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVG 180

Query: 181 FEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA 218
           FEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA
Sbjct: 181 FEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA 218


>gi|9910262 phosphoribosyl transferase domain containing 1 [Homo
           sapiens]
          Length = 225

 Score =  305 bits (781), Expect = 2e-83
 Identities = 144/211 (68%), Positives = 177/211 (83%)

Query: 7   GVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALC 66
           GVVI DD PGYDL+LF  P HY  DLE V IPHG+I+DR ERLA+D+MK++G   I+ LC
Sbjct: 14  GVVIMDDWPGYDLNLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLC 73

Query: 67  VLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLT 126
           VLKGGYKF ADL++++K ++RNSDR + M VDFIRLKSY NDQS G++++IGGDDLSTL 
Sbjct: 74  VLKGGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLA 133

Query: 127 GKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDK 186
           GKNVLIVED++ TG+TM+ LLS + +Y P M+KVASLLVKRT RS G++PD+ GFEIP+ 
Sbjct: 134 GKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDGFRPDYAGFEIPNL 193

Query: 187 FVVGYALDYNEYFRDLNHVCVISETGKAKYK 217
           FVVGYALDYNEYFRDLNH+CVI+E GK KY+
Sbjct: 194 FVVGYALDYNEYFRDLNHICVINEHGKEKYR 224


>gi|29570798 phosphoribosyl pyrophosphate amidotransferase
           proprotein [Homo sapiens]
          Length = 517

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 127 GKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMV--KVASLLVKRTPRSVGYKPDFVGFEIP 184
           GK +++V+D I  G T+  ++ L+++   K V  +VAS  +K         P F+G  IP
Sbjct: 382 GKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASPPIK--------YPCFMGINIP 433

Query: 185 DK 186
            K
Sbjct: 434 TK 435


>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
          Length = 2481

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 59   GHHIVALCVL-KGGYKFFADLLDYIKALNRNSDRSIPMTVDFI 100
            GHH  AL V  +G  + FADLL   +   ++SD   P+T+D I
Sbjct: 1183 GHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQI 1225


>gi|4504811 junction plakoglobin [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 82  IKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGK 141
           +  LN+N+ + + +T D ++L +Y N +S   I   GG        +N    E ++ T  
Sbjct: 274 VPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRN-YSYEKLLWTTS 332

Query: 142 TMQTLLSLVRQYNPKMVKVASL------LVKRTPRSV 172
            +  +LS+     P +V+   +      L   +PR V
Sbjct: 333 RVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLV 369


>gi|12056468 junction plakoglobin [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 82  IKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGK 141
           +  LN+N+ + + +T D ++L +Y N +S   I   GG        +N    E ++ T  
Sbjct: 274 VPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRN-YSYEKLLWTTS 332

Query: 142 TMQTLLSLVRQYNPKMVKVASL------LVKRTPRSV 172
            +  +LS+     P +V+   +      L   +PR V
Sbjct: 333 RVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLV 369


>gi|15431293 ribosomal protein L15 [Homo sapiens]
          Length = 204

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 37  IPHGLIMDRTERLARDVMKEMGGHHIVALCVLK-------GGYKFFADLL--DYIKALNR 87
           + HG+   +  R  + V +E  G H  AL VL          YKFF  +L   + KA+ R
Sbjct: 85  VHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRR 144

Query: 88  NSD 90
           N D
Sbjct: 145 NPD 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.142    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,966,358
Number of Sequences: 37866
Number of extensions: 323422
Number of successful extensions: 572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 7
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.