Guide to the Human Genome
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Name: CALCR Sequence: fasta or formatted (474aa) NCBI GI: 4502547
Description:

calcitonin receptor

Referenced in:

Bone and Related Tissues
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         30           6
 C cysteine            3.2         15           1
 D aspartate           2.7         13           2
 E glutamate           4.9         23           2
 F phenylalanine       6.5         31           3
 G glycine             4.2         20           1
 H histidine           3.4         16           1
 I isoleucine          6.8         32           4
 K lysine              4.2         20           2
 L leucine             9.5         45           3
 M methionine          3.4         16           2
 N asparagine          5.3         25           2
 P proline             5.5         26           1
 Q glutamine           4.0         19           2
 R arginine            4.9         23           2
 S serine              4.2         20           2
 T threonine           5.5         26           2
 V valine              7.4         35           2
 W tryptophan          2.7         13           1
 Y tyrosine            5.5         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcitonin receptor 
CALCRL                0.544   calcitonin receptor-like 
PTH1R                 0.217   parathyroid hormone receptor 1 precursor 
PTH2R                 0.200   parathyroid hormone 2 receptor precursor 
CRHR2                 0.198   corticotropin releasing hormone receptor 2 
VIPR1                 0.190   vasoactive intestinal peptide receptor 1 
CRHR1                 0.178   corticotropin releasing hormone receptor 1 isoform 2...
ADCYAP1R1             0.177   adenylate cyclase activating polypeptide 1 (pituitar...
GLP1R                 0.174   glucagon-like peptide 1 receptor 
CRHR1                 0.166   corticotropin releasing hormone receptor 1 isoform ...
SCTR                  0.166   secretin receptor precursor 
GCGR                  0.165   glucagon receptor 
CRHR1                 0.163   corticotropin releasing hormone receptor 1 isoform ...
GLP2R                 0.159   glucagon-like peptide 2 receptor precursor 
GIPR                  0.156   gastric inhibitory polypeptide receptor 
CRHR1                 0.149   corticotropin releasing hormone receptor 1 isoform ...
VIPR2                 0.138   vasoactive intestinal peptide receptor 2 
GHRHR                 0.138   growth hormone releasing hormone receptor isoform a ...
GHRHR                 0.086   growth hormone releasing hormone receptor isoform b ...
GPR133                0.086   G protein-coupled receptor 133 
GPR144                0.064   G protein-coupled receptor 144 
LPHN1                 0.064   latrophilin 1 isoform 1 precursor 
LPHN1                 0.064   latrophilin 1 isoform 2 precursor 
LPHN3                 0.060   latrophilin 3 precursor 
LPHN2                 0.059   latrophilin 2 precursor 
CELSR1                0.057   cadherin EGF LAG seven-pass G-type receptor 1 
BAI1                  0.052   brain-specific angiogenesis inhibitor 1 precursor [...
EMR1                  0.052   egf-like module containing, mucin-like, hormone rece...
CD97                  0.051   CD97 antigen isoform 3 precursor 
CD97                  0.051   CD97 antigen isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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