Search of human proteins with 42822880

Search of human proteins with 42822880

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42822880 beta-lactamase-like [Homo sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42822880 beta-lactamase-like [Homo sapiens]                        566   e-162
gi|7705793 lactamase, beta 2 [Homo sapiens]                            50   2e-06
gi|41327741 ETHE1 protein [Homo sapiens]                               42   8e-04
gi|223890225 POU class 6 homeobox 1 [Homo sapiens]                     32   0.62 
gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens]    31   1.4  
gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo sapi...    31   1.4  
gi|122937516 aldo-keto reductase family 1, member B10-like [Homo...    28   6.8  

>gi|42822880 beta-lactamase-like [Homo sapiens]
          Length = 279

 Score =  566 bits (1459), Expect = e-162
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MSALEWYAHKSLGDGIFWIQERFYESGNRANIWLVRGSEQDVVIDTGLGLRSLPEYLYSS 60
           MSALEWYAHKSLGDGIFWIQERFYESGNRANIWLVRGSEQDVVIDTGLGLRSLPEYLYSS
Sbjct: 1   MSALEWYAHKSLGDGIFWIQERFYESGNRANIWLVRGSEQDVVIDTGLGLRSLPEYLYSS 60

Query: 61  GLLQDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWL 120
           GLLQDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWL
Sbjct: 61  GLLQDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWL 120

Query: 121 SDSEVVRAPSPGWRARQFRVQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGSICLHDK 180
           SDSEVVRAPSPGWRARQFRVQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGSICLHDK
Sbjct: 121 SDSEVVRAPSPGWRARQFRVQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGSICLHDK 180

Query: 181 DRKILFSGDVVYDGSLIDWLPYSRISDYVGTCERLIELVDRGLVEKVLPGHFNTFGAERL 240
           DRKILFSGDVVYDGSLIDWLPYSRISDYVGTCERLIELVDRGLVEKVLPGHFNTFGAERL
Sbjct: 181 DRKILFSGDVVYDGSLIDWLPYSRISDYVGTCERLIELVDRGLVEKVLPGHFNTFGAERL 240

Query: 241 FRLASNYISKAGICHKVSTFAMRSLASLALRVTNSRTSP 279
           FRLASNYISKAGICHKVSTFAMRSLASLALRVTNSRTSP
Sbjct: 241 FRLASNYISKAGICHKVSTFAMRSLASLALRVTNSRTSP 279


>gi|7705793 lactamase, beta 2 [Homo sapiens]
          Length = 288

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 35/202 (17%)

Query: 31  NIWLVRGSEQDVVIDTGLGLRSLPEYLYSSGLLQDREAKEDAARRPLLAVATHVHFDHSG 90
           N +LV    + ++IDTG    ++PEY+     L+    + + A + +  V TH H DHSG
Sbjct: 32  NTYLVGTGPRRILIDTGEP--AIPEYI---SCLKQALTEFNTAIQEI--VVTHWHRDHSG 84

Query: 91  GLYQFDRVAVHHAEAEALARGDNFETVTWLSDSEVVRAPSPGWRARQFRVQAVQPTLILQ 150
           G+               + +  N +T   +   ++ R P    +  +      Q  + L+
Sbjct: 85  GIGD-------------ICKSINNDTTYCIK--KLPRNP----QREEIIGNGEQQYVYLK 125

Query: 151 DGDVINLGDRQLTVMHMPGHSRGSICLHDKDRKILFSGD-VVYDGSLIDWLPYSRISDYV 209
           DGDVI      L V++ PGH+   + L  ++   +FSGD ++ +G+ +    +  + DY+
Sbjct: 126 DGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTV----FEDLYDYM 181

Query: 210 GTCERLIELVDRGLVEKVLPGH 231
            + + L+++      + + PGH
Sbjct: 182 NSLKELLKI----KADIIYPGH 199


>gi|41327741 ETHE1 protein [Homo sapiens]
          Length = 254

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 31/128 (24%)

Query: 64  QDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWLSDS 123
           +D +  ++   R L AV TH H DH  G                               S
Sbjct: 60  RDAQLIKELGLRLLYAVNTHCHADHITG-------------------------------S 88

Query: 124 EVVRAPSPGWRARQFRVQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGSICLHDKDRK 183
            ++R+  PG ++   R+   Q  L ++DGD I  G   L     PGH+ G +     D  
Sbjct: 89  GLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHS 148

Query: 184 ILFSGDVV 191
           + F+GD +
Sbjct: 149 MAFTGDAL 156


>gi|223890225 POU class 6 homeobox 1 [Homo sapiens]
          Length = 301

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 109 ARGDNFETVTWLSDSEVVRAPSPGWRARQFRVQAVQPTLILQ-DGDVI 155
           A+G    T+ W+ +S  V AP+P   A+  +VQAV P L+L   G VI
Sbjct: 12  AQGQVIGTLPWVVNSASVAAPAP---AQSLQVQAVTPQLLLNAQGQVI 56


>gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens]
          Length = 361

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 35/118 (29%)

Query: 80  VATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWLSDSEVVRAPSPGWRARQFR 139
           + TH H+DHSGG     R    H                   D  V  +P  G       
Sbjct: 145 LCTHKHWDHSGGNRDLSR---RHR------------------DCRVYGSPQDG------- 176

Query: 140 VQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGS-ICLHD----KDRKILFSGDVVY 192
           +  +   L  QD  V+++G  Q+  +  PGH++G  + L D    K    LFSGD+++
Sbjct: 177 IPYLTHPLCHQD--VVSVGRLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLF 232


>gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo
           sapiens]
          Length = 385

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 35/118 (29%)

Query: 80  VATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFETVTWLSDSEVVRAPSPGWRARQFR 139
           + TH H+DHSGG     R    H                   D  V  +P  G       
Sbjct: 169 LCTHKHWDHSGGNRDLSR---RHR------------------DCRVYGSPQDG------- 200

Query: 140 VQAVQPTLILQDGDVINLGDRQLTVMHMPGHSRGS-ICLHD----KDRKILFSGDVVY 192
           +  +   L  QD  V+++G  Q+  +  PGH++G  + L D    K    LFSGD+++
Sbjct: 201 IPYLTHPLCHQD--VVSVGRLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLF 256


>gi|122937516 aldo-keto reductase family 1, member B10-like [Homo
           sapiens]
          Length = 316

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 208 YVGTCERLIELVDRGLVEKVLPGHFNTFGAERLFRLASNYISKAGICHKVST 259
           ++   E + ELVD GLV+ +   +FN F  ERL       ++K G+ +K  T
Sbjct: 138 FLDAWEAMEELVDEGLVKALGVSNFNHFQIERL-------LNKPGLKYKPVT 182


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,267,107
Number of Sequences: 37866
Number of extensions: 434096
Number of successful extensions: 789
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 10
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.