Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 38569434

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38569434 parathyroid hormone-responsive B1 isoform 2 [Homo
sapiens]
         (887 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38569434 parathyroid hormone-responsive B1 isoform 2 [Homo sa...  1774   0.0  
gi|75905803 parathyroid hormone-responsive B1 isoform 4 [Homo sa...  1756   0.0  
gi|75905801 parathyroid hormone-responsive B1 isoform 3 [Homo sa...  1686   0.0  
gi|38569432 parathyroid hormone-responsive B1 isoform 1 [Homo sa...  1673   0.0  
gi|21218438 GATA zinc finger domain containing 2B [Homo sapiens]       33   1.5  
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ...    32   3.4  
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ...    32   3.4  
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]               30   7.6  
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ...    30   9.9  
gi|9558749 elongation factor-2 kinase [Homo sapiens]                   30   9.9  

>gi|38569434 parathyroid hormone-responsive B1 isoform 2 [Homo
           sapiens]
          Length = 887

 Score = 1774 bits (4595), Expect = 0.0
 Identities = 887/887 (100%), Positives = 887/887 (100%)

Query: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60
           MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG
Sbjct: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60

Query: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120
           DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ
Sbjct: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120

Query: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180
           CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL
Sbjct: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180

Query: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240
           PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN
Sbjct: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240

Query: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300
           IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT
Sbjct: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300

Query: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360
           INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG
Sbjct: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360

Query: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420
           TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN
Sbjct: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420

Query: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480
           FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD
Sbjct: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480

Query: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP 540
           LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP
Sbjct: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP 540

Query: 541 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 600
           SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR
Sbjct: 541 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 600

Query: 601 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 660
           IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE
Sbjct: 601 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 660

Query: 661 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 720
           KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL
Sbjct: 661 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 720

Query: 721 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 780
           FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL
Sbjct: 721 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 780

Query: 781 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 840
           KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP
Sbjct: 781 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 840

Query: 841 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 887
           GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE
Sbjct: 841 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 887


>gi|75905803 parathyroid hormone-responsive B1 isoform 4 [Homo
           sapiens]
          Length = 882

 Score = 1756 bits (4549), Expect = 0.0
 Identities = 882/887 (99%), Positives = 882/887 (99%), Gaps = 5/887 (0%)

Query: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60
           MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG
Sbjct: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60

Query: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120
           DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ
Sbjct: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120

Query: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180
           CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL
Sbjct: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180

Query: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240
           PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN
Sbjct: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240

Query: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300
           IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT
Sbjct: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300

Query: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360
           INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG
Sbjct: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360

Query: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420
           TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN
Sbjct: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420

Query: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480
           FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD
Sbjct: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480

Query: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP 540
           LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPT     GIPRVIQCKFRLPLKLICLPGQP
Sbjct: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPT-----GIPRVIQCKFRLPLKLICLPGQP 535

Query: 541 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 600
           SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR
Sbjct: 536 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 595

Query: 601 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 660
           IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE
Sbjct: 596 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 655

Query: 661 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 720
           KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL
Sbjct: 656 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 715

Query: 721 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 780
           FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL
Sbjct: 716 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 775

Query: 781 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 840
           KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP
Sbjct: 776 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 835

Query: 841 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 887
           GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE
Sbjct: 836 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 882


>gi|75905801 parathyroid hormone-responsive B1 isoform 3 [Homo
           sapiens]
          Length = 852

 Score = 1686 bits (4367), Expect = 0.0
 Identities = 851/887 (95%), Positives = 852/887 (96%), Gaps = 35/887 (3%)

Query: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60
           MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG
Sbjct: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60

Query: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120
           DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ
Sbjct: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120

Query: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180
           CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL
Sbjct: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180

Query: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240
           PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN
Sbjct: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240

Query: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300
           IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT
Sbjct: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300

Query: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360
           INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG
Sbjct: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360

Query: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420
           TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN
Sbjct: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420

Query: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480
           FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFM   
Sbjct: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFM--- 477

Query: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP 540
                                           +RNPDGIPRVIQCKFRLPLKLICLPGQP
Sbjct: 478 --------------------------------NRNPDGIPRVIQCKFRLPLKLICLPGQP 505

Query: 541 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 600
           SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR
Sbjct: 506 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 565

Query: 601 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 660
           IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE
Sbjct: 566 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 625

Query: 661 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 720
           KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL
Sbjct: 626 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 685

Query: 721 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 780
           FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL
Sbjct: 686 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 745

Query: 781 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 840
           KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP
Sbjct: 746 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 805

Query: 841 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 887
           GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE
Sbjct: 806 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 852


>gi|38569432 parathyroid hormone-responsive B1 isoform 1 [Homo
           sapiens]
          Length = 847

 Score = 1673 bits (4332), Expect = 0.0
 Identities = 846/887 (95%), Positives = 847/887 (95%), Gaps = 40/887 (4%)

Query: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60
           MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG
Sbjct: 1   MSLFKARDWWSTILGDKEEFDQGCLCLANVDNSGNGQDKIIVGSFMGYLRIFSPHPAKTG 60

Query: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120
           DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ
Sbjct: 61  DGAQAEDLLLEVDLRDPVLQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQ 120

Query: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180
           CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL
Sbjct: 121 CQMKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSMDGMLMVFEQESYAFGRFLPGFLL 180

Query: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240
           PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN
Sbjct: 181 PGPLAYSSRTDSFLTVSSCQQVESYKYQVLAFATDADKRQETEQQKLGSGKRLVVDWTLN 240

Query: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300
           IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT
Sbjct: 241 IGEQALDICIVSFNQSASSVFVLGERNFFCLKDNGQIRFMKKLDWSPSCFLPYCSVSEGT 300

Query: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360
           INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG
Sbjct: 301 INTLIGNHNNMLHIYQDVTLKWATQLPHIPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLG 360

Query: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420
           TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN
Sbjct: 361 TDPSLFQAPNVQSRELNYDELDVEMKELQKIIKDVNKSQGVWPMTEREDDLNVSVVVSPN 420

Query: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMTPD 480
           FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFM+  
Sbjct: 421 FDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPPLELTCDQFTFEFMS-- 478

Query: 481 LTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQP 540
                                                 IPRVIQCKFRLPLKLICLPGQP
Sbjct: 479 --------------------------------------IPRVIQCKFRLPLKLICLPGQP 500

Query: 541 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 600
           SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR
Sbjct: 501 SKTASHKITIDTNKSPVSLLSLFPGFASQSDDDQVNVMGFHFLGGARITVLASKTSQRYR 560

Query: 601 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 660
           IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE
Sbjct: 561 IQSEQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGE 620

Query: 661 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 720
           KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL
Sbjct: 621 KLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQGNL 680

Query: 721 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 780
           FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL
Sbjct: 681 FQSFTRLKSATHLVILLIALWQKLSADQVAILEAAFLPLQEDTQELGWEETVDAAISHLL 740

Query: 781 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 840
           KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP
Sbjct: 741 KTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDRLSKGGRLCLSTDAAAPQTMVMP 800

Query: 841 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 887
           GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE
Sbjct: 801 GGCTTIPESDLEERSVEQDSTELFTNHRHLTAETPRPEVSPLQGVSE 847


>gi|21218438 GATA zinc finger domain containing 2B [Homo sapiens]
          Length = 593

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 34/200 (17%)

Query: 674 RAIQRRLLARFKDKTPAPLQH-LDTLLDGTYKQVIALADAVE---ENQGNLFQSFTRL-- 727
           + +++ LL     K PAPL H L +  +  +  ++ L + V+   ++QG    S  R+  
Sbjct: 358 KQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKSCASLLRVEP 417

Query: 728 -----------------KSATHLVILLIALWQK--LSADQVAILEAAFLPLQEDTQELGW 768
                            K+   L    +   QK  L A+    L+ AF+   +  QE+  
Sbjct: 418 FVCAQCRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQ 477

Query: 769 EETVDAAISHLLKTCLSKSSKEQALNLNSQL-NIPKDTSQLKKHITLLCDRLSKGGRLCL 827
                AA+S      +S  SK++ +  +  L   P+  S L++ I           R  L
Sbjct: 478 RLQQQAALSPTTAPAVSSVSKQETIMRHHTLRQAPQPQSSLQRGI-------PTSARSML 530

Query: 828 STDAAAPQTMVMPGGCTTIP 847
           S  A APQ  V PGG   +P
Sbjct: 531 SNFAQAPQLSV-PGGLLGMP 549


>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
           isoform a [Homo sapiens]
          Length = 625

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 33/224 (14%)

Query: 334 RVGCLHDLKGVIVTLSDDGHLQCSYLGTDPSLFQAPNVQSR--ELNYDELDVEMKELQKI 391
           R G   D +  + T  DD H +  Y      +  A    S+  +   D+++  + EL  +
Sbjct: 39  RKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL 98

Query: 392 IKDVNKSQGVWPMTEREDDLNVSVVVSPNFDSVSQATDVEVGTDLVPSVTVKVTLQNRVI 451
           +   N       M+ + D L V  +   +  ++  AT+     +  P+      L++ +I
Sbjct: 99  VPTCNA------MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKH-LI 151

Query: 452 LQKAKLSVYVQPPLELTCDQFTFEFMTPDLTRTVSFSVYLKRSYTPSELEGNAVVSYSRP 511
           L+ A   ++V     + CD+    F        VS SV+   +Y+ ++L G ++  Y  P
Sbjct: 152 LRAADGFLFV-----VGCDRGKILF--------VSESVFKILNYSQNDLIGQSLFDYLHP 198

Query: 512 TD--------RNPDGIP--RVIQCKFRLPLKLICLPGQPSKTAS 545
            D         + D  P  R+I  K  LP+K    PG PS+  S
Sbjct: 199 KDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPG-PSRLCS 241


>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
           isoform a [Homo sapiens]
          Length = 625

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 33/224 (14%)

Query: 334 RVGCLHDLKGVIVTLSDDGHLQCSYLGTDPSLFQAPNVQSR--ELNYDELDVEMKELQKI 391
           R G   D +  + T  DD H +  Y      +  A    S+  +   D+++  + EL  +
Sbjct: 39  RKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL 98

Query: 392 IKDVNKSQGVWPMTEREDDLNVSVVVSPNFDSVSQATDVEVGTDLVPSVTVKVTLQNRVI 451
           +   N       M+ + D L V  +   +  ++  AT+     +  P+      L++ +I
Sbjct: 99  VPTCNA------MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKH-LI 151

Query: 452 LQKAKLSVYVQPPLELTCDQFTFEFMTPDLTRTVSFSVYLKRSYTPSELEGNAVVSYSRP 511
           L+ A   ++V     + CD+    F        VS SV+   +Y+ ++L G ++  Y  P
Sbjct: 152 LRAADGFLFV-----VGCDRGKILF--------VSESVFKILNYSQNDLIGQSLFDYLHP 198

Query: 512 TD--------RNPDGIP--RVIQCKFRLPLKLICLPGQPSKTAS 545
            D         + D  P  R+I  K  LP+K    PG PS+  S
Sbjct: 199 KDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPG-PSRLCS 241


>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
          Length = 1946

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 19/112 (16%)

Query: 604  EQFEDLWLITNELILRLQEYFEKQGVKDFACSFSGSIPLQEYFELIDHHFELRINGEKLE 663
            ++ EDL     EL +RLQE  E  GV   A + + S+      E   H  +L + G+ L 
Sbjct: 1393 QRTEDLEDAKKELAIRLQEAAEAMGV---ANARNASL------ERARHQLQLEL-GDALS 1442

Query: 664  ELLSERAVQFRAIQRRL-----LARFKDKTPAPLQHLDTLLDGTYKQVIALA 710
            +L   R+   R  Q++L     LA +K K     +    LLD + K+V AL+
Sbjct: 1443 DLGKVRSAAARLDQKQLQSGKALADWKQKH----EESQALLDASQKEVQALS 1490


>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
           isoform b [Homo sapiens]
          Length = 582

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 33/211 (15%)

Query: 347 TLSDDGHLQCSYLGTDPSLFQAPNVQSR--ELNYDELDVEMKELQKIIKDVNKSQGVWPM 404
           T  DD H +  Y      +  A    S+  +   D+++  + EL  ++   N       M
Sbjct: 9   TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA------M 62

Query: 405 TEREDDLNVSVVVSPNFDSVSQATDVEVGTDLVPSVTVKVTLQNRVILQKAKLSVYVQPP 464
           + + D L V  +   +  ++  AT+     +  P+      L++ +IL+ A   ++V   
Sbjct: 63  SRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKH-LILRAADGFLFV--- 118

Query: 465 LELTCDQFTFEFMTPDLTRTVSFSVYLKRSYTPSELEGNAVVSYSRPTD--------RNP 516
             + CD+    F        VS SV+   +Y+ ++L G ++  Y  P D         + 
Sbjct: 119 --VGCDRGKILF--------VSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSS 168

Query: 517 DGIP--RVIQCKFRLPLKLICLPGQPSKTAS 545
           D  P  R+I  K  LP+K    PG PS+  S
Sbjct: 169 DTAPRERLIDAKTGLPVKTDITPG-PSRLCS 198


>gi|9558749 elongation factor-2 kinase [Homo sapiens]
          Length = 725

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 645 YFELIDHHFELRINGEKLEELLSERAVQFRAIQRRLLARFKDKTPAPLQHLDTLLDGTYK 704
           YFE +    E ++ GE+       + V    I +  +   KD+   PL HL+  ++G Y 
Sbjct: 181 YFEDVRLQMEAKLWGEEYNRHKPPKQVD---IMQMCIIELKDRPGKPLFHLEHYIEGKYI 237

Query: 705 QVIALADAVEENQGNL----FQSFTRLKSATHLVIL 736
           +  + +  V ++   L    F  FT  +S   L+++
Sbjct: 238 KYNSNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVV 273


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,474,156
Number of Sequences: 37866
Number of extensions: 1507614
Number of successful extensions: 3371
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3360
Number of HSP's gapped (non-prelim): 16
length of query: 887
length of database: 18,247,518
effective HSP length: 111
effective length of query: 776
effective length of database: 14,044,392
effective search space: 10898448192
effective search space used: 10898448192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press