Search of human proteins with 33667030

Search of human proteins with 33667030

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33667030 myo-inositol oxygenase [Homo sapiens]
         (285 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33667030 myo-inositol oxygenase [Homo sapiens]                     614   e-176
gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Hom...    34   0.17 
gi|38569460 SNF1-like kinase 2 [Homo sapiens]                          32   0.83 
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       30   2.4  

>gi|33667030 myo-inositol oxygenase [Homo sapiens]
          Length = 285

 Score =  614 bits (1583), Expect = e-176
 Identities = 285/285 (100%), Positives = 285/285 (100%)

Query: 1   MKVTVGPDPSLVYRPDVDPEVAKDKASFRNYTSGPLLDRVFTTYKLMHTHQTVDFVRSKH 60
           MKVTVGPDPSLVYRPDVDPEVAKDKASFRNYTSGPLLDRVFTTYKLMHTHQTVDFVRSKH
Sbjct: 1   MKVTVGPDPSLVYRPDVDPEVAKDKASFRNYTSGPLLDRVFTTYKLMHTHQTVDFVRSKH 60

Query: 61  AQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVG 120
           AQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVG
Sbjct: 61  AQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVG 120

Query: 121 LLHDLGKVLALFGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQ 180
           LLHDLGKVLALFGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQ
Sbjct: 121 LLHDLGKVLALFGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQ 180

Query: 181 PHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDL 240
           PHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDL
Sbjct: 181 PHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDL 240

Query: 241 AMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285
           AMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW
Sbjct: 241 AMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285


>gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Homo
           sapiens]
          Length = 617

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 151 QASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLP 210
           + SV    +      D  DP  S  LG+ Q   GLD+ L    H   +  ++ ++K+   
Sbjct: 401 EGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRA 460

Query: 211 PEAFYMIRFHSFYPWHTGRDYQQLCSQQDLA 241
            + +Y   F  F P  T +  + L  ++DLA
Sbjct: 461 LDEYYDKHFTEFVPLRT-KAKEILQEEEDLA 490


>gi|38569460 SNF1-like kinase 2 [Homo sapiens]
          Length = 926

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 81  DGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLALFGEPQWAVV 140
           +GL  E + + D  ++F AFQ+    ++ H   +  + + ++   GK+ ++   P    V
Sbjct: 454 EGLETEGEAEEDPAHAFEAFQSTRSGQRRHTLSEVTNQLVVMPGAGKIFSMNDSPSLDSV 513

Query: 141 GDTFPVGCRPQASVVFCDSTFQDNPDLQD 169
              + +G     SV    +  +DNP L+D
Sbjct: 514 DSEYDMG-----SVQRDLNFLEDNPSLKD 537


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 26   ASFRNYTSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVD 85
            AS RN+ S  L   V   +K++  + T +FV     ++          M+A+D++  L+D
Sbjct: 2562 ASLRNFYSHSLSGAVSNVFKILQPNTTDEFVIPLDPRWN---------MQALDMIRNLMD 2612

Query: 86   ESDPDVDFPNSFHA 99
              DP  D P+   A
Sbjct: 2613 -FDPQTDQPDQLFA 2625


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.141    0.465 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,174,361
Number of Sequences: 37866
Number of extensions: 541408
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 724
Number of HSP's gapped (non-prelim): 5
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.