Search of human proteins with 33519475

Search of human proteins with 33519475

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33519475 NADH dehydrogenase (ubiquinone) Fe-S protein 1,
75kDa precursor [Homo sapiens]
         (727 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33519475 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kD...  1446   0.0  
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    32   1.6  
gi|58530848 destrin isoform b [Homo sapiens]                           31   3.6  
gi|5802966 destrin isoform a [Homo sapiens]                            31   3.6  
gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens]            31   4.6  
gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens]             31   4.6  
gi|41281583 Histidine acid phosphatase domain containing 1 [Homo...    30   7.9  

>gi|33519475 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa
           precursor [Homo sapiens]
          Length = 727

 Score = 1446 bits (3743), Expect = 0.0
 Identities = 727/727 (100%), Positives = 727/727 (100%)

Query: 1   MLRIPVRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQI 60
           MLRIPVRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQI
Sbjct: 1   MLRIPVRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQI 60

Query: 61  PRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFL 120
           PRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFL
Sbjct: 61  PRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFL 120

Query: 121 LANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCT 180
           LANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCT
Sbjct: 121 LANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCT 180

Query: 181 RCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTA 240
           RCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTA
Sbjct: 181 RCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTA 240

Query: 241 RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQ 300
           RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQ
Sbjct: 241 RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQ 300

Query: 301 RLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNR 360
           RLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNR
Sbjct: 301 RLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNR 360

Query: 361 VDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRK 420
           VDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRK
Sbjct: 361 VDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRK 420

Query: 421 SWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSA 480
           SWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSA
Sbjct: 421 SWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSA 480

Query: 481 LQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKN 540
           LQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKN
Sbjct: 481 LQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKN 540

Query: 541 PPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTE 600
           PPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTE
Sbjct: 541 PPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTE 600

Query: 601 GRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIE 660
           GRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIE
Sbjct: 601 GRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIE 660

Query: 661 GANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
           GANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQA
Sbjct: 661 GANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQA 720

Query: 721 VEEPSIC 727
           VEEPSIC
Sbjct: 721 VEEPSIC 727


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
           [Homo sapiens]
          Length = 1636

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 21/121 (17%)

Query: 577 APIADVILPGAAYTE--KSATYVNTE----------------GRAQQTKVAVTPPGLARE 618
           A +A+V    A Y E  + A++ N+E                G   Q + A+  P L+ E
Sbjct: 489 AELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTPALSPE 548

Query: 619 DWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQ 678
           D  +++ L  I       +  DQ R  LE+    L++ DDI  +      +E+ KL  +Q
Sbjct: 549 DKAVLQNLKRILAKV--QEMRDQ-RVSLEQQLRELIQKDDITASLVTTDHSEMKKLFEEQ 605

Query: 679 L 679
           L
Sbjct: 606 L 606


>gi|58530848 destrin isoform b [Homo sapiens]
          Length = 148

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 21/107 (19%)

Query: 535 EAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHH---GDVGAPIADV------ILP 585
           E I+K    V+F L AD          K C I+ +G     GDVG  I D       +LP
Sbjct: 10  EEIKKRKKAVIFCLSAD----------KKCIIVEEGKEILVGDVGVTITDPFKHFVGMLP 59

Query: 586 --GAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIA 630
                Y    A++   E R ++    +  P LA    K+I A S+ A
Sbjct: 60  EKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDA 106


>gi|5802966 destrin isoform a [Homo sapiens]
          Length = 165

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 21/107 (19%)

Query: 535 EAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHH---GDVGAPIADV------ILP 585
           E I+K    V+F L AD          K C I+ +G     GDVG  I D       +LP
Sbjct: 27  EEIKKRKKAVIFCLSAD----------KKCIIVEEGKEILVGDVGVTITDPFKHFVGMLP 76

Query: 586 --GAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIA 630
                Y    A++   E R ++    +  P LA    K+I A S+ A
Sbjct: 77  EKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDA 123


>gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens]
          Length = 257

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 11/155 (7%)

Query: 402 LVGTNPRFEAPLFN---ARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASG 458
           L+  NP     LFN       +  L +D  +  +  PVDL++   H   +P  LQ  +  
Sbjct: 51  LLDANPMENPALFNDIKIEPPEELLASDFSLPQV-EPVDLSF---HKPKAP--LQPASML 104

Query: 459 SHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHR 518
             P      ++    +V+ +S    +  A I   ++     +  +S  TG  ++++++H 
Sbjct: 105 QAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTP--GSVLTSSQSTGSQQILHVIHT 162

Query: 519 IASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGG 553
           I S      +G    +  + ++ P V   L ADGG
Sbjct: 163 IPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGG 197


>gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens]
          Length = 359

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 11/155 (7%)

Query: 402 LVGTNPRFEAPLFN---ARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASG 458
           L+  NP     LFN       +  L +D  +  +  PVDL++   H   +P  LQ  +  
Sbjct: 51  LLDANPMENPALFNDIKIEPPEELLASDFSLPQV-EPVDLSF---HKPKAP--LQPASML 104

Query: 459 SHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHR 518
             P      ++    +V+ +S    +  A I   ++     +  +S  TG  ++++++H 
Sbjct: 105 QAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTP--GSVLTSSQSTGSQQILHVIHT 162

Query: 519 IASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGG 553
           I S      +G    +  + ++ P V   L ADGG
Sbjct: 163 IPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGG 197


>gi|41281583 Histidine acid phosphatase domain containing 1 [Homo
           sapiens]
          Length = 1222

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 535 EAIRKNPPKVLFLLGADG-----GCITRQDLPKDCFIIYQGHHGD-VGAPIADVILPGAA 588
           E  R+  P +L +L   G     G +  ++L +    +Y G  GD  G P   ++   + 
Sbjct: 496 EDSRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHST 555

Query: 589 YTEKSATYVNTEGRAQQTKVAVTPPGLARE 618
           Y      Y + EGR Q T  A     LA E
Sbjct: 556 YRHDLKIYASDEGRVQMTAAAFAKGLLALE 585


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,935,318
Number of Sequences: 37866
Number of extensions: 1095897
Number of successful extensions: 2246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2245
Number of HSP's gapped (non-prelim): 7
length of query: 727
length of database: 18,247,518
effective HSP length: 110
effective length of query: 617
effective length of database: 14,082,258
effective search space: 8688753186
effective search space used: 8688753186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.