Guide to the Human Genome
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Search of human proteins with 122939159

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122939159 peptidyl arginine deiminase, type II [Homo
sapiens]
         (665 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]     1363   0.0  
gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]     688   0.0  
gi|122056685 peptidylarginine deiminase type I [Homo sapiens]         670   0.0  
gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]      662   0.0  
gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]         538   e-153
gi|194394146 dipeptidylpeptidase 9 [Homo sapiens]                      32   1.4  
gi|4759144 solute carrier family 9 (sodium/hydrogen exchanger), ...    30   5.5  
gi|15553127 hexokinase 2 [Homo sapiens]                                30   9.3  

>gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]
          Length = 665

 Score = 1363 bits (3529), Expect = 0.0
 Identities = 665/665 (100%), Positives = 665/665 (100%)

Query: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60
           MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE
Sbjct: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60

Query: 61  VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120
           VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL
Sbjct: 61  VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120

Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180
           DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD
Sbjct: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180

Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 240
           MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK
Sbjct: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 240

Query: 241 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 300
           YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT
Sbjct: 241 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 300

Query: 301 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEA 360
           PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEA
Sbjct: 301 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEA 360

Query: 361 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 420
           PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN
Sbjct: 361 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 420

Query: 421 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 480
           GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP
Sbjct: 421 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 480

Query: 481 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 540
           IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE
Sbjct: 481 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 540

Query: 541 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 600
           NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI
Sbjct: 541 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 600

Query: 601 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 660
           PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW
Sbjct: 601 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 660

Query: 661 WHMVP 665
           WHMVP
Sbjct: 661 WHMVP 665


>gi|122939161 peptidyl arginine deiminase, type III [Homo sapiens]
          Length = 664

 Score =  688 bits (1775), Expect = 0.0
 Identities = 345/667 (51%), Positives = 452/667 (67%), Gaps = 5/667 (0%)

Query: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60
           M  +R VR+       AV V G     D+Y + P G + F +  +  V + +  + E   
Sbjct: 1   MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60

Query: 61  VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120
              + + RW    +  + V M+  S + +   V ++Y+     +P+  A L+LT ++ISL
Sbjct: 61  ERADTR-RWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISL 119

Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180
           D D + +G  ++N   K  W WGP G G ILLVNCDR+ P    +D  D+ V+  +DL+D
Sbjct: 120 DCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLED 179

Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPF-FGQRYIHILGRRKLYHVV 239
           MS M+LRT+GP  L   +++VL+ S  D+ +  VF++  P    + Y H+LG+ K+ + V
Sbjct: 180 MSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEV 239

Query: 240 KYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIM 299
               G  E  FFVEGL FPD GF+GL+S HV+LL+   +D   +PIFTDTV+FR+APWIM
Sbjct: 240 PRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIM 298

Query: 300 TPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIE 359
           TP+ LPP+ V+VC +++N  F+  V  L  K  C+L +C Q  NR DRWIQDE+E GY++
Sbjct: 299 TPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQ 358

Query: 360 APHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTV 419
           APHK  PVV DSPR+G L+DFP K +LGPDFGYVTREP   SV+ LDSFGNLEVSPPV  
Sbjct: 359 APHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVA 418

Query: 420 NGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFV 479
           NGK YPLGRILIG + P S GRR+T+VVRDFL AQ+VQ PVEL+ DWL VGHVDEF+SFV
Sbjct: 419 NGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFV 478

Query: 480 PIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKG-LGGMSSKRITINKILSNESLV 538
           P P  K F +L+AS  AC+KLF+EKQK GHG A++F+G +     K I+IN++LSN+ L+
Sbjct: 479 PAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLI 538

Query: 539 QENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDL 598
             N + Q C+DWNR++LK+ELGL E DIID+P LFK  E  +A AFFP++VNM+VL K L
Sbjct: 539 NYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFK-TERKKATAFFPDLVNMLVLGKHL 597

Query: 599 GIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTF 658
           GIPKPFGP +   CCLE  VR LLEPLGL CTFIDD + YH   GEVHCGTNV RKPF+F
Sbjct: 598 GIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSF 657

Query: 659 KWWHMVP 665
           KWW+MVP
Sbjct: 658 KWWNMVP 664


>gi|122056685 peptidylarginine deiminase type I [Homo sapiens]
          Length = 663

 Score =  670 bits (1729), Expect = 0.0
 Identities = 350/671 (52%), Positives = 453/671 (67%), Gaps = 14/671 (2%)

Query: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVV--RDGEA 58
           M  +R V+L       AV V+G     D++S  P GA +F +  S  V V +V  R    
Sbjct: 1   MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 60

Query: 59  EEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEI 118
           E +   GK RW L     + V++  AS E    KV V+Y+ E+    + ++ L+LT ++I
Sbjct: 61  EPI---GKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDI 117

Query: 119 SLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178
           SL+VD  R G V+++   K +W WGPEG GAILLVNCDR+     + D     + S  DL
Sbjct: 118 SLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADL 177

Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238
           +DMS M+L   GPD+L   +++VL +  SDS +V VF          Y  +LG + L + 
Sbjct: 178 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 237

Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298
           V+   G  E+ F+VEGL FPD  F GLVS+ VSL++     +P   +FTDTV FR+APWI
Sbjct: 238 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVD--PGTLPEVTLFTDTVGFRMAPWI 295

Query: 299 MTPNILPPVSVFVCCMKD----NYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIE 354
           MTPN  PP  ++VC + D    N  FL+++  L  K NC+L +C Q  NR DRWIQDE+E
Sbjct: 296 MTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEME 355

Query: 355 FGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVS 414
           FGYIEAPHK FPVV DSPR+  LKDFP K +LGPDFGYVTRE      +SLDSFGNL+VS
Sbjct: 356 FGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVS 415

Query: 415 PPVTVNGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDE 474
           PPVTV G  YPLGRILIGSSFP SGGR+M + VR+FLKAQQVQAPVELYSDWL+VGHVDE
Sbjct: 416 PPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE 475

Query: 475 FMSFVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSN 534
           F++FVP    K F LL+AS SAC KLF+EK+++G+GEA  F GL   + +  +IN++L++
Sbjct: 476 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKR--SINEMLAD 533

Query: 535 ESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVL 594
             L ++NL+ Q+C+DWNR++LK+ELGL E DI+D+P LF + ++  A AFFP+MVNM+VL
Sbjct: 534 RHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-KNFYAEAFFPDMVNMVVL 592

Query: 595 DKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRK 654
            K LGIPKP+GP +   CCLE  V+ LLEPLGL C FIDD  +YH+  GE+HCGTNVRRK
Sbjct: 593 GKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRK 652

Query: 655 PFTFKWWHMVP 665
           PF FKWW+MVP
Sbjct: 653 PFPFKWWNMVP 663


>gi|216548487 peptidyl arginine deiminase, type IV [Homo sapiens]
          Length = 663

 Score =  662 bits (1709), Expect = 0.0
 Identities = 337/668 (50%), Positives = 440/668 (65%), Gaps = 8/668 (1%)

Query: 1   MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60
           M +   +R+       AV VLGT    D+ S+AP    +FS+  S  V V++     A++
Sbjct: 1   MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHGPPAKK 60

Query: 61  VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120
            +T G   W L P   + +TM  AS      KV ++YY  +   P  +A L+LT +EISL
Sbjct: 61  KST-GSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPK--TPPVKALLYLTGVEISL 117

Query: 121 DVDADRDGVVEKNNPKK--ASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178
             D  R G V+     K   +WTWGP GQGAILLVNCDR+       DC D++V   EDL
Sbjct: 118 CADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDL 177

Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238
           +DMS M L TK P      + +VL+++ S+ DKV VF         +   +LG +   H 
Sbjct: 178 QDMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHY 237

Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298
           +   GG   + F+VE L FPD  F GL+++ +SLL+    ++P   +F D+V+FR+APWI
Sbjct: 238 LMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWI 297

Query: 299 MTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYI 358
           MTPN  PP  V+ C + +N  FLK V  L  K  C+L +C +  N  D+W+QDE+E GYI
Sbjct: 298 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 357

Query: 359 EAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVT 418
           +APHK  PVV DSPR+  LK+FP+K ++GPDFGYVTR P    ++ LDSFGNLEVSPPVT
Sbjct: 358 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 417

Query: 419 VNGKTYPLGRILIGSS-FPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMS 477
           V GK YPLGRIL G S +P +  R+M + ++DFL AQQVQAPV+LYSDWL+VGHVDEF+S
Sbjct: 418 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 477

Query: 478 FVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESL 537
           FVP P  K F LL+AS  +CYKLF+E+Q +GHGEA++F+G+     K+  I  ILSN++L
Sbjct: 478 FVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGI--KKKKQQKIKNILSNKTL 535

Query: 538 VQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKD 597
            + N + +RC+DWNR++LK+ELGL E DIID+P LFK+ E  +A AFFPNMVNM+VL K 
Sbjct: 536 REHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKH 595

Query: 598 LGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFT 657
           LGIPKPFGP +   CCLE  V  LLEPLGL+CTFI+D   YH   GEVHCGTNVRRKPF+
Sbjct: 596 LGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHCGTNVRRKPFS 655

Query: 658 FKWWHMVP 665
           FKWW+MVP
Sbjct: 656 FKWWNMVP 663


>gi|117414158 peptidylarginine deiminase type 6 [Homo sapiens]
          Length = 694

 Score =  538 bits (1385), Expect = e-153
 Identities = 303/686 (44%), Positives = 421/686 (61%), Gaps = 33/686 (4%)

Query: 7   VRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEEVATNGK 66
           + L   S V AV VLGT +  D+   AP   Q F++  S  V ++V     +E+   +  
Sbjct: 15  IHLSLDSPVHAVCVLGTEICLDLSGCAPQKCQCFTIHGSGRVLIDVANTVISEK--EDAT 72

Query: 67  QRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISLDVDADR 126
             W LS  T   V M+  S    +DKV+V YY      P+  A L+LT IE+SL+VD  R
Sbjct: 73  IWWPLSDPTYATVKMTSPSPSVDADKVSVTYYGPNEDAPVGTAVLYLTGIEVSLEVDIYR 132

Query: 127 DGVVEKNNPKKAS--WTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKDMSQM 184
           +G VE ++ K+A   W WGP G GAILLVNC+        ED + +KV   E++ ++SQM
Sbjct: 133 NGQVEMSSDKQAKKKWIWGPSGWGAILLVNCNPADVGQQLEDKKTKKVIFSEEITNLSQM 192

Query: 185 ILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVKYTGG 244
            L  +GP  +   Y +VL+ S  +S K  V++ +       +  +LG  +  + +   G 
Sbjct: 193 TLNVQGPSCILKKYRLVLHTSKEESKKARVYWPQKDN-SSTFELVLGPDQHAYTLALLGN 251

Query: 245 SAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQD--IPLTPIFTDTVIFRIAPWIMTPN 302
             +  F+VE + FP   FSGL+S  VSL+E  +QD  IP T ++ DTV+FR+AP +  P 
Sbjct: 252 HLKETFYVEAIAFPSAEFSGLISYSVSLVEE-SQDPSIPETVLYKDTVVFRVAPCVFIPC 310

Query: 303 ILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEAPH 362
              P+ V++C       F+  V  L EK+N ++   ++  NR  RW+QDE+ F Y +APH
Sbjct: 311 TQVPLEVYLCRELQLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEMAFCYTQAPH 370

Query: 363 KGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVNGK 422
           K   ++LD+P+  +L +FP+K  L P  GY+ ++     V S+DS GNL VSPPV V GK
Sbjct: 371 KTTSLILDTPQAADLDEFPMKYSLSPGIGYMIQDTEDHKVASMDSIGNLMVSPPVKVQGK 430

Query: 423 TYPLGRILIGSSF-PLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVPI 481
            YPLGR+LIGSSF P + GR M+K +RDFL AQQVQAPVELYSDWL  GHVDEFM F+P 
Sbjct: 431 EYPLGRVLIGSSFYPSAEGRAMSKTLRDFLYAQQVQAPVELYSDWLMTGHVDEFMCFIPT 490

Query: 482 ----PGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGL-------GGMSSKRITINK 530
                G K FLLL+AS SACYKLFREKQK+G+G+A++F  L        G  +K  TI++
Sbjct: 491 DDKNEGKKGFLLLLASPSACYKLFREKQKEGYGDALLFDELRADQLLSNGREAK--TIDQ 548

Query: 531 ILSNESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDE------DHR---- 580
           +L++ESL ++N Y ++C+  NRDILK ELGL EQDII++P LF +++      D +    
Sbjct: 549 LLADESLKKQNEYVEKCIHLNRDILKTELGLVEQDIIEIPQLFCLEKLTNIPSDQQPKRS 608

Query: 581 -ARAFFPNMVNMIVLDKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYH 639
            AR +FP+++ MIV+ K+LGIPKPFGPQ++  CCLE  +  LLEPLG +CTFI+D   Y 
Sbjct: 609 FARPYFPDLLRMIVMGKNLGIPKPFGPQIKGTCCLEEKICCLLEPLGFKCTFINDFDCYL 668

Query: 640 KFLGEVHCGTNVRRKPFTFKWWHMVP 665
             +G++    N+RR PF FKWW MVP
Sbjct: 669 TEVGDICACANIRRVPFAFKWWKMVP 694


>gi|194394146 dipeptidylpeptidase 9 [Homo sapiens]
          Length = 892

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)

Query: 317 NYLFLKEVKNLVEKTNC-----ELKVC------FQYLNRGDRWIQDEIEFGY---IEAPH 362
           N   +  +K L  KT C     + K+C      F ++N  D W+ + IE G    +   H
Sbjct: 197 NGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVAN-IETGEERRLTFCH 255

Query: 363 KGFPVVLDSPRDGNLKDFPVKELLGPDFGY 392
           +G   VLD P+   +  F ++E      GY
Sbjct: 256 QGLSNVLDDPKSAGVATFVIQEEFDRFTGY 285


>gi|4759144 solute carrier family 9 (sodium/hydrogen exchanger),
           isoform 5 [Homo sapiens]
          Length = 896

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 54  RDGEAEEVATNGKQRWL-LSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQA 109
           +DG A   ATNGK R L    +  + +T+     E  SD       D+EG I + +A
Sbjct: 672 KDGVANAEATNGKHRGLGFQDTAAVILTVESEEEEEESDSSETEKEDDEGIIFVARA 728


>gi|15553127 hexokinase 2 [Homo sapiens]
          Length = 917

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 604 FGPQVEEECCLEMHVRGLLEPLGLECTFIDDI 635
           F  Q+E +C   + VR +L+ LGLE T  D I
Sbjct: 786 FLSQIESDCLALLQVRAILQHLGLESTCDDSI 817


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,128,953
Number of Sequences: 37866
Number of extensions: 1230381
Number of successful extensions: 2162
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2133
Number of HSP's gapped (non-prelim): 8
length of query: 665
length of database: 18,247,518
effective HSP length: 109
effective length of query: 556
effective length of database: 14,120,124
effective search space: 7850788944
effective search space used: 7850788944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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