Search of human proteins with 32698890

Search of human proteins with 32698890

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32698890 hypothetical protein LOC161145 [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32698890 hypothetical protein LOC161145 [Homo sapiens]             357   3e-99
gi|209862782 hypothetical protein LOC730130 [Homo sapiens]             88   3e-18
gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]             29   2.1  
gi|20336246 proprotein convertase subtilisin/kexin type 5 prepro...    28   4.8  

>gi|32698890 hypothetical protein LOC161145 [Homo sapiens]
          Length = 167

 Score =  357 bits (916), Expect = 3e-99
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIV 60
           MASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIV
Sbjct: 1   MASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIV 60

Query: 61  ERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFILRQFNACPWDYSQFDFDFMGLITLEY 120
           ERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFILRQFNACPWDYSQFDFDFMGLITLEY
Sbjct: 61  ERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFILRQFNACPWDYSQFDFDFMGLITLEY 120

Query: 121 AVPWFCGALIMEQFIIRNTLRLRFDKDAEPGEPSGALALANGHVKTD 167
           AVPWFCGALIMEQFIIRNTLRLRFDKDAEPGEPSGALALANGHVKTD
Sbjct: 121 AVPWFCGALIMEQFIIRNTLRLRFDKDAEPGEPSGALALANGHVKTD 167


>gi|209862782 hypothetical protein LOC730130 [Homo sapiens]
          Length = 380

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)

Query: 2   ASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIVE 61
           A ++ L  L R+  + +HG+  E+ FT  +  +   +    G TS+W+ F+YG+   +VE
Sbjct: 233 APSQGLPDLPRFLFFGMHGFLDEIFFTFFFNVLGQGDGTTSGHTSLWSFFMYGSCSFVVE 292

Query: 62  RMYLRL---RGRCPLLLRCLIYTLWTYLWEFTTGFILRQFNACPWDYSQFDFDFMGLITL 118
           ++Y  L   RG      R  IY ++ Y+WE + G  LR   AC WDYS +  +FMGLITL
Sbjct: 293 KLYFHLHYSRG-WGTWKRVPIYVIFIYVWELSWGLGLRTCGACSWDYSHYPLNFMGLITL 351

Query: 119 EYAVPWFCGALIMEQFIIRNTL 140
            Y   W    L + Q +I N L
Sbjct: 352 MYLPGWI--FLSVYQDLISNVL 371



 Score = 37.4 bits (85), Expect = 0.006
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 2   ASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNLNWKFPGVTSVWALFIYGTSILIVE 61
           A +  L A  R Y Y +HG   +V+ ++A  F  + + +  G +S +   ++  +   +E
Sbjct: 46  AESATLPAWMRLYFYGMHGITLDVLVSSARRFARSPDLRMLGFSSPYRCLLHSLTHFALE 105

Query: 62  RMYLRLRGRCP 72
           ++YL+ R RCP
Sbjct: 106 KVYLQQR-RCP 115


>gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]
          Length = 1512

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)

Query: 125  FCGALIMEQFIIRNTLRLRFDKDAEPGEPS-GALAL 159
            FCG +  E +I + T R   D+D EPG PS GA +L
Sbjct: 1447 FCGEIDCEDWIKKTTAR---DQDLEPGAPSMGAKSL 1479


>gi|20336246 proprotein convertase subtilisin/kexin type 5
           preproprotein [Homo sapiens]
          Length = 913

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 38  NWKFPGVTSVWALFIYGTSI 57
           N+K PG    W+L +YGTS+
Sbjct: 581 NFKTPGKLKEWSLVLYGTSV 600


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.331    0.144    0.499 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,314,089
Number of Sequences: 37866
Number of extensions: 239033
Number of successful extensions: 459
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 453
Number of HSP's gapped (non-prelim): 5
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.