Search of human proteins with 31742508

Search of human proteins with 31742508

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31742508 uridine phosphorylase 1 [Homo sapiens]
         (310 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31742508 uridine phosphorylase 1 [Homo sapiens]                    621   e-178
gi|4507839 uridine phosphorylase 1 [Homo sapiens]                     621   e-178
gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens]         386   e-107
gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens]          386   e-107
gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens]                 32   0.94 
gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]       32   0.94 
gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]       32   0.94 
gi|47132622 5'-methylthioadenosine phosphorylase [Homo sapiens]        30   2.7  
gi|120953251 neuron navigator 3 [Homo sapiens]                         30   3.6  

>gi|31742508 uridine phosphorylase 1 [Homo sapiens]
          Length = 310

 Score =  621 bits (1602), Expect = e-178
 Identities = 310/310 (100%), Positives = 310/310 (100%)

Query: 1   MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG 60
           MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG
Sbjct: 1   MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG 60

Query: 61  SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH 120
           SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH
Sbjct: 61  SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH 120

Query: 121 ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT 180
           ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT
Sbjct: 121 ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT 180

Query: 181 DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY 240
           DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY
Sbjct: 181 DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY 240

Query: 241 AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS 300
           AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS
Sbjct: 241 AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS 300

Query: 301 YFIKKKLSKA 310
           YFIKKKLSKA
Sbjct: 301 YFIKKKLSKA 310


>gi|4507839 uridine phosphorylase 1 [Homo sapiens]
          Length = 310

 Score =  621 bits (1602), Expect = e-178
 Identities = 310/310 (100%), Positives = 310/310 (100%)

Query: 1   MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG 60
           MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG
Sbjct: 1   MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGG 60

Query: 61  SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH 120
           SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH
Sbjct: 61  SPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLH 120

Query: 121 ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT 180
           ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT
Sbjct: 121 ELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKT 180

Query: 181 DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY 240
           DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY
Sbjct: 181 DLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAY 240

Query: 241 AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS 300
           AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS
Sbjct: 241 AAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVS 300

Query: 301 YFIKKKLSKA 310
           YFIKKKLSKA
Sbjct: 301 YFIKKKLSKA 310


>gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens]
          Length = 374

 Score =  386 bits (992), Expect = e-107
 Identities = 191/289 (66%), Positives = 231/289 (79%)

Query: 19  VRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGL 78
           V + NP +  M EDILYH +L T  HN PA+FGDVKFVCVGGSP+RMKAF   +  ELG 
Sbjct: 82  VHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGF 141

Query: 79  DCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIR 138
           +    D  +ICAGTDRY MYK GPVL++SHGMGIPSISIMLHELIKLL++ARC +VTIIR
Sbjct: 142 EEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISIMLHELIKLLHHARCCDVTIIR 201

Query: 139 IGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELS 198
           IGTSGGIG+ PGTVVIT+ AVD+ FK  FEQ++L   V R T+L+K+L +EL  CS E+ 
Sbjct: 202 IGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVTRSTELDKELSEELFNCSKEIP 261

Query: 199 EFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMC 258
            F T+VG+TMCT DFYEGQGRLDGALCS++ + K  YL+ A+ AGVRNIEMES+VFAAMC
Sbjct: 262 NFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMC 321

Query: 259 SACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKL 307
             CGL+AAVVCVTLL+RL+ DQI+ P +VL EYQQRPQ L+S FI+++L
Sbjct: 322 GLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLLISNFIRRRL 370


>gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens]
          Length = 317

 Score =  386 bits (992), Expect = e-107
 Identities = 191/289 (66%), Positives = 231/289 (79%)

Query: 19  VRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGL 78
           V + NP +  M EDILYH +L T  HN PA+FGDVKFVCVGGSP+RMKAF   +  ELG 
Sbjct: 25  VHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGF 84

Query: 79  DCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIR 138
           +    D  +ICAGTDRY MYK GPVL++SHGMGIPSISIMLHELIKLL++ARC +VTIIR
Sbjct: 85  EEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISIMLHELIKLLHHARCCDVTIIR 144

Query: 139 IGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELS 198
           IGTSGGIG+ PGTVVIT+ AVD+ FK  FEQ++L   V R T+L+K+L +EL  CS E+ 
Sbjct: 145 IGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVTRSTELDKELSEELFNCSKEIP 204

Query: 199 EFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMC 258
            F T+VG+TMCT DFYEGQGRLDGALCS++ + K  YL+ A+ AGVRNIEMES+VFAAMC
Sbjct: 205 NFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMC 264

Query: 259 SACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKL 307
             CGL+AAVVCVTLL+RL+ DQI+ P +VL EYQQRPQ L+S FI+++L
Sbjct: 265 GLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLLISNFIRRRL 313


>gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens]
          Length = 1044

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 78  LDCPGRDYPNICAGT--DRYAMYKVGPVLSVSHGMGIPSISIMLHE 121
           LD  G  YP++  G+  D   +++  P+L VSH + I   SI L +
Sbjct: 354 LDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQ 399


>gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]
          Length = 1141

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 78  LDCPGRDYPNICAGT--DRYAMYKVGPVLSVSHGMGIPSISIMLHE 121
           LD  G  YP++  G+  D   +++  P+L VSH + I   SI L +
Sbjct: 451 LDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQ 496


>gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]
          Length = 1137

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 78  LDCPGRDYPNICAGT--DRYAMYKVGPVLSVSHGMGIPSISIMLHE 121
           LD  G  YP++  G+  D   +++  P+L VSH + I   SI L +
Sbjct: 447 LDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQ 492


>gi|47132622 5'-methylthioadenosine phosphorylase [Homo sapiens]
          Length = 283

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 132 SNVTIIRIGTSGGIGLEPGTVVI--TEQAVDTCFKAEFEQIVLGK 174
           +  T ++IG  GG GL+   ++   TE+ VDT F    + ++LGK
Sbjct: 5   TTTTAVKIGIIGGTGLDDPEILEGRTEKYVDTPFGKPSDALILGK 49


>gi|120953251 neuron navigator 3 [Homo sapiens]
          Length = 2363

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 41   TSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDR--YAMY 98
            T +        D + V + GSP          GA+ GL  PG  YP+I + T R  +   
Sbjct: 1197 TDKEKEKVAVSDSESVSLSGSPKSSPTSASACGAQ-GLRQPGSKYPDIASPTFRRLFGAK 1255

Query: 99   KVGPVLSVSHGMGIPSISIM 118
              G   S  +  G+ S S+M
Sbjct: 1256 AGGKSASAPNTEGVKSSSVM 1275


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,048,383
Number of Sequences: 37866
Number of extensions: 456744
Number of successful extensions: 820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 815
Number of HSP's gapped (non-prelim): 10
length of query: 310
length of database: 18,247,518
effective HSP length: 102
effective length of query: 208
effective length of database: 14,385,186
effective search space: 2992118688
effective search space used: 2992118688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.