Search of human proteins with 31652255

Search of human proteins with 31652255

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31652255 lysozyme G-like 2 [Homo sapiens]
         (212 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31652255 lysozyme G-like 2 [Homo sapiens]                          437   e-123
gi|28372527 lysozyme g-like protein 1 precursor [Homo sapiens]        144   7e-35
gi|165932391 family with sequence similarity 69, member A [Homo ...    28   7.5  
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa...    27   9.8  

>gi|31652255 lysozyme G-like 2 [Homo sapiens]
          Length = 212

 Score =  437 bits (1124), Expect = e-123
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MLSSVVFWGLIALIGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMN 60
           MLSSVVFWGLIALIGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMN
Sbjct: 1   MLSSVVFWGLIALIGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMN 60

Query: 61  CGIRGSEMFAEMDLRAIKPYQTLIKEVGQRHCVDPAVIAAIISRESHGGSVLQDGWDHRG 120
           CGIRGSEMFAEMDLRAIKPYQTLIKEVGQRHCVDPAVIAAIISRESHGGSVLQDGWDHRG
Sbjct: 61  CGIRGSEMFAEMDLRAIKPYQTLIKEVGQRHCVDPAVIAAIISRESHGGSVLQDGWDHRG 120

Query: 121 LKFGLMQLDKQTYHPVGAWDSKEHLSQATGILTERIKAIQKKFPTWSVAQHLKGGLSAFK 180
           LKFGLMQLDKQTYHPVGAWDSKEHLSQATGILTERIKAIQKKFPTWSVAQHLKGGLSAFK
Sbjct: 121 LKFGLMQLDKQTYHPVGAWDSKEHLSQATGILTERIKAIQKKFPTWSVAQHLKGGLSAFK 180

Query: 181 SGIEAIATPSDIDNDFVNDIIARAKFYKRQSF 212
           SGIEAIATPSDIDNDFVNDIIARAKFYKRQSF
Sbjct: 181 SGIEAIATPSDIDNDFVNDIIARAKFYKRQSF 212


>gi|28372527 lysozyme g-like protein 1 precursor [Homo sapiens]
          Length = 194

 Score =  144 bits (362), Expect = 7e-35
 Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 9/178 (5%)

Query: 38  GCYGDIMTMKTSGATCDA---NSVMNCGIRGSEMFAEMDLRAIKPYQTLIKEVGQRHCVD 94
           GCYG+I ++ T GA+C     + +  CG+R SE  AE+D+  +  YQ +++ +GQ++C+D
Sbjct: 23  GCYGNIQSLDTPGASCGIGRRHGLNYCGVRASERLAEIDMPYLLKYQPMMQTIGQKYCMD 82

Query: 95  PAVIAAIISRESHGGSVLQDGWDHRGLKFGLMQLDKQTYHPVGAWDSKEHLSQATGILTE 154
           PAVIA ++SR+S G  +L +  D        M  D  +  P  +W S+  +SQ T +LT 
Sbjct: 83  PAVIAGVLSRKSPGDKILVNMGDRTS-----MVQDPGSQAPT-SWISESQVSQTTEVLTT 136

Query: 155 RIKAIQKKFPTWSVAQHLKGGLSAFKSGIEAIATPSDIDNDFVNDIIARAKFYKRQSF 212
           RIK IQ++FPTW+  Q+L+GGL A+  G   + +  D+  DF ND++ARAK+ KR  F
Sbjct: 137 RIKEIQRRFPTWTPDQYLRGGLCAYSGGAGYVRSSQDLSCDFCNDVLARAKYLKRHGF 194


>gi|165932391 family with sequence similarity 69, member A [Homo
           sapiens]
          Length = 428

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 35  LYHGCYGDIMTMKTSGATCDANSVMNCGIRGSEMFAEMDLRAIKPYQTLIKEVGQRHC 92
           ++HG YG+ +        CD  S  N G         +D+R I P   L + +  RHC
Sbjct: 282 VFHGPYGNFLM-------CDT-SAKNLGYNDKYDLKMVDMRKIVPETNLKELIKDRHC 331


>gi|28916698 transposon-derived Buster3 transposase-like [Homo
           sapiens]
          Length = 594

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)

Query: 107 HGGSVLQDGWDHRGLKFGLMQLDKQTYHPVGAWDSKEHLSQATGILTERIKAIQKKFPTW 166
           H  S L DG++++  K  L  L     H      S +     T    E++ A  +KFP W
Sbjct: 356 HKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFW 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,653,022
Number of Sequences: 37866
Number of extensions: 298560
Number of successful extensions: 530
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 525
Number of HSP's gapped (non-prelim): 4
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.