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Search of human proteins with 31317261
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31317261 tafazzin isoform 3 [Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31317261 tafazzin isoform 3 [Homo sapiens] 593 e-170
gi|4507371 tafazzin isoform 1 [Homo sapiens] 583 e-167
gi|31317263 tafazzin isoform 4 [Homo sapiens] 516 e-146
gi|31317259 tafazzin isoform 2 [Homo sapiens] 506 e-144
gi|208431776 phosphatidylinositol-4-phosphate 5-kinase, type I, ... 33 0.36
gi|116268093 taste receptor, type 2, member 41 [Homo sapiens] 30 3.0
gi|5454102 transforming, acidic coiled-coil containing protein 3... 29 4.0
gi|4502281 Na+/K+ -ATPase beta 3 subunit [Homo sapiens] 29 4.0
gi|13376146 zinc finger and BTB domain containing 3 [Homo sapiens] 28 6.8
gi|42794273 F-box and leucine-rich repeat protein 22 [Homo sapiens] 28 6.8
>gi|31317261 tafazzin isoform 3 [Homo sapiens]
Length = 278
Score = 593 bits (1529), Expect = e-170
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
Sbjct: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
Query: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
Sbjct: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
Query: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE
Sbjct: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
Query: 181 GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA 240
GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA
Sbjct: 181 GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA 240
Query: 241 ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 278
ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
Sbjct: 241 ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 278
>gi|4507371 tafazzin isoform 1 [Homo sapiens]
Length = 292
Score = 583 bits (1504), Expect = e-167
Identities = 278/292 (95%), Positives = 278/292 (95%), Gaps = 14/292 (4%)
Query: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
Sbjct: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
Query: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
Sbjct: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
Query: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE
Sbjct: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
Query: 181 --------------GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG 226
GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG
Sbjct: 181 GKVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG 240
Query: 227 KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 278
KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
Sbjct: 241 KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 292
>gi|31317263 tafazzin isoform 4 [Homo sapiens]
Length = 248
Score = 516 bits (1328), Expect = e-146
Identities = 248/278 (89%), Positives = 248/278 (89%), Gaps = 30/278 (10%)
Query: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
Sbjct: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
Query: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
Sbjct: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
Query: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
VCR GDGVYQKGMDFILEKLNHGDWVHIFPE
Sbjct: 121 VCR------------------------------GDGVYQKGMDFILEKLNHGDWVHIFPE 150
Query: 181 GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA 240
GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA
Sbjct: 151 GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRA 210
Query: 241 ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 278
ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
Sbjct: 211 ENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 248
>gi|31317259 tafazzin isoform 2 [Homo sapiens]
Length = 262
Score = 506 bits (1303), Expect = e-144
Identities = 248/292 (84%), Positives = 248/292 (84%), Gaps = 44/292 (15%)
Query: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA
Sbjct: 1 MPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPA 60
Query: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP
Sbjct: 61 TPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVP 120
Query: 121 VCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPE 180
VCR GDGVYQKGMDFILEKLNHGDWVHIFPE
Sbjct: 121 VCR------------------------------GDGVYQKGMDFILEKLNHGDWVHIFPE 150
Query: 181 --------------GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG 226
GIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG
Sbjct: 151 GKVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIG 210
Query: 227 KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 278
KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
Sbjct: 211 KPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR 262
>gi|208431776 phosphatidylinositol-4-phosphate 5-kinase, type I,
alpha isoform 4 [Homo sapiens]
Length = 500
Score = 32.7 bits (73), Expect = 0.36
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 18/105 (17%)
Query: 126 EFFQAENEGKGVLDTGRHMPGAGKRREKGDGV--YQKGMDFI-----LEKLNH------- 171
E Q E G ++T HM G R KG+ + Y +D + ++KL H
Sbjct: 352 ESIQGEARRGGTMETDDHMGGIPARNSKGERLLLYIGIIDILQSYRFVKKLEHSWKALVH 411
Query: 172 -GDWVHIFPEGI-GRLIAECHLNPII--LPLWHVGMNDVLPNSPP 212
GD V + G N + +P H+G DVLP +PP
Sbjct: 412 DGDTVSVHRPGFYAERFQRFMCNTVFKKIPCVHLGRPDVLPQTPP 456
>gi|116268093 taste receptor, type 2, member 41 [Homo sapiens]
Length = 307
Score = 29.6 bits (65), Expect = 3.0
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 3 LHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKY 38
L +KW FP P W L SV++ + T FW Y
Sbjct: 120 LWLKWRFPGWVP--WLLLGSVLISFIITLLFFWVNY 153
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 29.3 bits (64), Expect = 4.0
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 207 LPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQ 266
+P PP P G G P S P+++ L+ K + KA QEE + L+++
Sbjct: 613 VPGPPPGVPAPG-------GPPLSTGPIVDLLQYSQKDLDAVVKAT----QEENRELRSR 661
Query: 267 AEQLH 271
E+LH
Sbjct: 662 CEELH 666
>gi|4502281 Na+/K+ -ATPase beta 3 subunit [Homo sapiens]
Length = 279
Score = 29.3 bits (64), Expect = 4.0
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 158 YQKGMDFILEKLNHGDWVHIFPEGIGRL--IAECHLNPIILPLWHVGMNDVLPNSPPYFP 215
Y +G IL K+N + + PEG+ R+ +++ P + H GM D+ YFP
Sbjct: 164 YSQGNPCILVKMNR--IIGLKPEGVPRIDCVSKNEDIPNVAVYPHNGMIDL-----KYFP 216
Query: 216 RFGQKITVLIGKPFSALPV 234
+G+K+ V +P A+ V
Sbjct: 217 YYGKKLHVGYLQPLVAVQV 235
>gi|13376146 zinc finger and BTB domain containing 3 [Homo
sapiens]
Length = 574
Score = 28.5 bits (62), Expect = 6.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 6 KWPFPAVPPLTWTLASSVVMGLVGTY------SCFWTKYMNHLTV----HNREVLYELIE 55
KW A P W S++ G VG Y FW + + T+ H++++L L E
Sbjct: 7 KWGVEASPGKAWERKRSLLRGAVGRYRGATGGDLFWAPFPSWGTMEFPEHSQQLLQSLRE 66
Query: 56 KR 57
+R
Sbjct: 67 QR 68
>gi|42794273 F-box and leucine-rich repeat protein 22 [Homo
sapiens]
Length = 241
Score = 28.5 bits (62), Expect = 6.8
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 41 HLTVHNREVLYEL---IEKRGPATPLITVSNHQSCMDDPHLWGILKLRHIWNLK 91
H+T NRE L L ++K + T S +DP LW +L R + L+
Sbjct: 2 HITQLNRECLLHLFSFLDKDSRKSLARTCSQLHDVFEDPALWSLLHFRSLTELQ 55
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,499,560
Number of Sequences: 37866
Number of extensions: 594548
Number of successful extensions: 1335
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1326
Number of HSP's gapped (non-prelim): 11
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.