Search of human proteins with 30578418

Search of human proteins with 30578418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30578418 sideroflexin 2 [Homo sapiens]
         (322 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30578418 sideroflexin 2 [Homo sapiens]                             649   0.0  
gi|23618867 sideroflexin 1 [Homo sapiens]                             353   9e-98
gi|31621303 sideroflexin 3 [Homo sapiens]                             342   3e-94
gi|21389351 sideroflexin 5 [Homo sapiens]                             219   3e-57
gi|47458811 sideroflexin 4 [Homo sapiens]                              74   2e-13
gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens]          29   4.9  
gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]                  28   8.4  
gi|189409125 transcription factor Dp family, member 3 [Homo sapi...    28   8.4  

>gi|30578418 sideroflexin 2 [Homo sapiens]
          Length = 322

 Score =  649 bits (1675), Expect = 0.0
 Identities = 322/322 (100%), Positives = 322/322 (100%)

Query: 1   MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPP 60
           MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPP
Sbjct: 1   MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPP 60

Query: 61  GTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQ 120
           GTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQ
Sbjct: 61  GTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQ 120

Query: 121 WVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVP 180
           WVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVP
Sbjct: 121 WVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVP 180

Query: 181 FAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGM 240
           FAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGM
Sbjct: 181 FAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGM 240

Query: 241 ILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPK 300
           ILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPK
Sbjct: 241 ILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPK 300

Query: 301 LQDTIKAKYGELEPYVYFNKGL 322
           LQDTIKAKYGELEPYVYFNKGL
Sbjct: 301 LQDTIKAKYGELEPYVYFNKGL 322


>gi|23618867 sideroflexin 1 [Homo sapiens]
          Length = 322

 Score =  353 bits (907), Expect = 9e-98
 Identities = 176/314 (56%), Positives = 224/314 (71%), Gaps = 1/314 (0%)

Query: 9   NIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGTQVEQLL 68
           NI  PRWDQ TF+GR  HF  +TDPR + ++  +L+ A+ +V   R G+VPPG    +L 
Sbjct: 10  NIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPPGLTENELW 69

Query: 69  YAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWVNQSFNA 128
            AK +YDSAFHPDTGEKM +IGRMS Q+P  M ITG M+ FYRT PAV+FWQW+NQSFNA
Sbjct: 70  RAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNA 129

Query: 129 LVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVPFAAVAAAN 188
           +VNYTNR+  +P +V ++  +Y +ATT AVATA+G+N LTK   PL+GR+VPFAAVAAAN
Sbjct: 130 VVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPFAAVAAAN 189

Query: 189 CVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIME 248
           C+NIP+MRQ+EL  GI V D N N +G S  AA   ITQVV+SRI M+APGM + P IM 
Sbjct: 190 CINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMN 249

Query: 249 RLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPKLQDTIKAK 308
            LEK  F+++   + AP+QV L G  L+F  P+ C LFPQK  + V+ LE +LQ  I+  
Sbjct: 250 TLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQES 309

Query: 309 YGELEPYVYFNKGL 322
           + EL   VYFNKGL
Sbjct: 310 HPELR-RVYFNKGL 322


>gi|31621303 sideroflexin 3 [Homo sapiens]
          Length = 325

 Score =  342 bits (877), Expect = 3e-94
 Identities = 176/314 (56%), Positives = 224/314 (71%), Gaps = 1/314 (0%)

Query: 9   NIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGTQVEQLL 68
           NI  PRWDQ TFLGR +HF  +TDPR + +S  +L+ ++ +V+  R GVV PG   +QL 
Sbjct: 13  NIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQLEASRNIVQNYRAGVVTPGITEDQLW 72

Query: 69  YAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWVNQSFNA 128
            AK +YDSAFHPDTGEK+ +IGRMS Q+P  M ITG ML FYR  P V+FWQWVNQSFNA
Sbjct: 73  RAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTITGCMLTFYRKTPTVVFWQWVNQSFNA 132

Query: 129 LVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVPFAAVAAAN 188
           +VNY+NR+  +P +VRQ+  +Y +ATT AVATA+G+  LTK  PPLVGR+VPFAAVAAAN
Sbjct: 133 IVNYSNRSGDTPITVRQLGTAYVSATTGAVATALGLKSLTKHLPPLVGRFVPFAAVAAAN 192

Query: 189 CVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIME 248
           C+NIP+MRQ+EL  GI V D     +G+S  AA  GI QVVISRI M+ P M + P+IM+
Sbjct: 193 CINIPLMRQRELQVGIPVADEAGQRLGYSVTAAKQGIFQVVISRICMAIPAMAIPPLIMD 252

Query: 249 RLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPKLQDTIKAK 308
            LEK  F+++   L APLQV L G  L+F  P+ C LFPQK  + +S LEP+L+  I  +
Sbjct: 253 TLEKKDFLKRRPWLGAPLQVGLVGFCLVFATPLCCALFPQKSSIHISNLEPELRAQIHEQ 312

Query: 309 YGELEPYVYFNKGL 322
              +E  VY+NKGL
Sbjct: 313 NPSVE-VVYYNKGL 325


>gi|21389351 sideroflexin 5 [Homo sapiens]
          Length = 340

 Score =  219 bits (558), Expect = 3e-57
 Identities = 125/327 (38%), Positives = 187/327 (57%), Gaps = 13/327 (3%)

Query: 3   ADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGT 62
           +D   F +  PR+ Q +F GR +HFL+I DPRT+FV+ER L  A  ++E  + G + PG 
Sbjct: 20  SDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRLREAVQLLEDYKHGTLRPGV 79

Query: 63  QVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWV 122
             EQL  A+K+  +  HPDT EK+ +  RMS  +P G  I   +L   +T+ + +FWQW+
Sbjct: 80  TNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIVVGLLLPNQTLASTVFWQWL 139

Query: 123 NQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPP-------LV 175
           NQS NA VNY NRNA  P+   +    Y  A  +AV+ AVG+N+L +KA         L+
Sbjct: 140 NQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVGLNVLVQKANKFTPATRLLI 199

Query: 176 GRWVPFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITM 235
            R+VPF AVA+AN  N+ +MR  EL +GI V D + N +G S+ AA   + +  ++R+ +
Sbjct: 200 QRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGSSKIAARHALLETALTRVVL 259

Query: 236 SAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVS 295
             P ++L P++M  LEK   +Q    L  P+Q ++        +P+A  LFPQ  E+  S
Sbjct: 260 PMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFGLALPLAISLFPQMSEIETS 319

Query: 296 YLEPKLQDTIKAKYGELEPYVYFNKGL 322
            LEP++     ++       V +NKGL
Sbjct: 320 QLEPEIAQATSSR------TVVYNKGL 340


>gi|47458811 sideroflexin 4 [Homo sapiens]
          Length = 337

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 22/316 (6%)

Query: 16  DQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYD 75
           ++++F+ R   +  + DP  VF+S   ++ ++ ++  +   V  P +  +++  A K   
Sbjct: 35  ERQSFIRRFLQWTELLDPTNVFISVESIENSRQLLCTNE-DVSSPASADQRIQEAWKRSL 93

Query: 76  SAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNR 135
           +  HPD+   +  + R +  LP         +   + + +VI  Q    ++ A  N  N 
Sbjct: 94  ATVHPDSSNLIPKLFRPAAFLPFMAPTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSING 153

Query: 136 NAASPTSVRQMALSYFTATTTAVATAVGM-----NMLTKKAPPLVGRWVPFAAVAAANCV 190
           N +   + + +  S   A   A +T +G+      M      P + R +P   +  A+ +
Sbjct: 154 NRSY--TCKPLERSLLMAGAVASSTFLGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGM 211

Query: 191 NIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIMERL 250
           N+ M R  E IKGI V D+  N +GHSR A    + + + SRI +     ++  V     
Sbjct: 212 NVYMSRSLESIKGIAVMDKEGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFF 271

Query: 251 EKLHFMQK----VKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPKLQDTIK 306
           ++  + +K    + +L     V+  G     MVP +  +FPQ  ++    LE K+Q   +
Sbjct: 272 KRTQYFRKNPGSLWILKLSCTVLAMG----LMVPFSFSIFPQIGQIQYCSLEEKIQSPTE 327

Query: 307 AKYGELEPYVYFNKGL 322
                 E  +++++G+
Sbjct: 328 ------ETEIFYHRGV 337


>gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens]
          Length = 479

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 91  RMSFQLPGGMIITGFMLQFYRTMPAVIFWQWV 122
           R + ++ G MI   ++L F    PA++FWQ+V
Sbjct: 143 RRTTKMAGLMIAAAWVLSFVLWAPAILFWQFV 174


>gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]
          Length = 370

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 48  VMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVI 89
           +  +K ++GV+PP   + +L    +L+D+    D  E +N +
Sbjct: 91  IATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYL 132


>gi|189409125 transcription factor Dp family, member 3 [Homo
           sapiens]
          Length = 405

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 136 NAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVPFAAVAAANCVNIPMM 195
           N ASP        +    T  A+   + MN+++++   +  +W+     +A NC N+ + 
Sbjct: 146 NHASPNESAYDVKNIKRRTYDALNVLMAMNIISREKKKI--KWIGLTTNSAQNCQNLRVE 203

Query: 196 RQQEL 200
           RQ+ L
Sbjct: 204 RQKRL 208


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,663,734
Number of Sequences: 37866
Number of extensions: 459805
Number of successful extensions: 1128
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1118
Number of HSP's gapped (non-prelim): 8
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.