Search of human proteins with 28973797

Search of human proteins with 28973797

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo
sapiens]
         (331 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens]    676   0.0  
gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens]    552   e-157
gi|197313662 leprecan-like 1 isoform b [Homo sapiens]                  32   0.60 
gi|27764882 leprecan-like 1 isoform a [Homo sapiens]                   32   0.60 
gi|11545906 fructosamine 3 kinase [Homo sapiens]                       30   2.3  
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]            30   3.9  
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]            30   3.9  
gi|8923271 coiled-coil domain containing 49 [Homo sapiens]             29   6.6  
gi|144446030 lymphocyte antigen 75 [Homo sapiens]                      28   8.7  

>gi|28973797 hypothetical protein LOC79701 isoform 2 [Homo sapiens]
          Length = 331

 Score =  676 bits (1744), Expect = 0.0
 Identities = 331/331 (100%), Positives = 331/331 (100%)

Query: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60
           MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL
Sbjct: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120
           WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE
Sbjct: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120

Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180
           EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL
Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180

Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240
           YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD
Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240

Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMSCGFQEVNGPRASEAAGA 300
           YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMSCGFQEVNGPRASEAAGA
Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMSCGFQEVNGPRASEAAGA 300

Query: 301 KAGVRCPPGTHHPPERGETHAILEAESIAYC 331
           KAGVRCPPGTHHPPERGETHAILEAESIAYC
Sbjct: 301 KAGVRCPPGTHHPPERGETHAILEAESIAYC 331


>gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens]
          Length = 319

 Score =  552 bits (1423), Expect = e-157
 Identities = 275/279 (98%), Positives = 275/279 (98%)

Query: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60
           MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL
Sbjct: 1   MAPQRRAATKAPEGNGAAERRNRSSTKKDRAPREVQRLWQRPWLRTAGLGAGFVLTALLL 60

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120
           WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE
Sbjct: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGCTPRKCGRGVTDVVITRE 120

Query: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180
           EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL
Sbjct: 121 EAERIRSVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGDKIQNIFSEEDFRL 180

Query: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240
           YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD
Sbjct: 181 YREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFD 240

Query: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCF 279
           YTSLLYLSNYLEDFGGGRFMFMEEGANKTVE RAG   F
Sbjct: 241 YTSLLYLSNYLEDFGGGRFMFMEEGANKTVEPRAGRVSF 279


>gi|197313662 leprecan-like 1 isoform b [Homo sapiens]
          Length = 527

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)

Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMS 283
           DY++LLY++   +DF GG F+F E  A KTV       C RM+S
Sbjct: 423 DYSALLYMN---DDFEGGEFIFTEMDA-KTVTASIKPKCGRMIS 462


>gi|27764882 leprecan-like 1 isoform a [Homo sapiens]
          Length = 708

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)

Query: 240 DYTSLLYLSNYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMS 283
           DY++LLY++   +DF GG F+F E  A KTV       C RM+S
Sbjct: 604 DYSALLYMN---DDFEGGEFIFTEMDA-KTVTASIKPKCGRMIS 643


>gi|11545906 fructosamine 3 kinase [Homo sapiens]
          Length = 309

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 27  KKDRAPREVQRLWQRPWLRTAGLGAGF-VLTALL---LWSSLGADDGVAEVL 74
           +KD A RE + LW R  ++   L  G  ++ ALL   LWS   A+D V  ++
Sbjct: 181 EKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPII 232


>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116
           W     DD ++   A      A R   VP + D  S  RF  C  +PR+C R +T  V
Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191


>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 61  WSSLGADDGVAEVLARRGEVVAGRFIEVPCSEDYDSHRRFEGC--TPRKCGRGVTDVV 116
           W     DD ++   A      A R   VP + D  S  RF  C  +PR+C R +T  V
Sbjct: 134 WRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDV 191


>gi|8923271 coiled-coil domain containing 49 [Homo sapiens]
          Length = 425

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 2   APQRRAATKAPEGNGAAERRNRSSTKKDRAPR 33
           +P R A+ K+    G+ +RR+RS  ++ R+PR
Sbjct: 266 SPPRHASKKSTREAGSRDRRSRSLGRRSRSPR 297


>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
          Length = 1722

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 249 NYLEDFGGGRFMFMEEGANKTVERRAGCFCFRMMSCGFQEVNGPRASEAAGAKAGVRCPP 308
           N+LE    G  + M  G +        C  F+ +S   ++++GP   E A  K    CP 
Sbjct: 587 NFLEPASPGGCVAMSTGKSVGKWEVKDCRSFKALSI-CKKMSGPLGPEEASPKPDDPCPE 645

Query: 309 GTHHPPERGETHAILEAESI 328
           G    P     + +  AE I
Sbjct: 646 GWQSFPASLSCYKVFHAERI 665


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,956,943
Number of Sequences: 37866
Number of extensions: 567300
Number of successful extensions: 1663
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1660
Number of HSP's gapped (non-prelim): 9
length of query: 331
length of database: 18,247,518
effective HSP length: 103
effective length of query: 228
effective length of database: 14,347,320
effective search space: 3271188960
effective search space used: 3271188960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.