Search of human proteins with 24307999

Search of human proteins with 24307999

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24307999 glycerol-3-phosphate dehydrogenase 1-like [Homo
sapiens]
         (351 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24307999 glycerol-3-phosphate dehydrogenase 1-like [Homo sapi...   699   0.0  
gi|33695088 glycerol-3-phosphate dehydrogenase 1 (soluble) [Homo...   524   e-149
gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens]              35   0.13 
gi|21955174 kinesin family member C2 [Homo sapiens]                    29   5.5  
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s...    29   7.2  
gi|33469968 minichromosome maintenance complex component 7 isofo...    28   9.4  
gi|33469922 minichromosome maintenance complex component 7 isofo...    28   9.4  
gi|21361454 pyrroline-5-carboxylate reductase family, member 2 [...    28   9.4  

>gi|24307999 glycerol-3-phosphate dehydrogenase 1-like [Homo
           sapiens]
          Length = 351

 Score =  699 bits (1803), Expect = 0.0
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MAAAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDH 60
           MAAAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDH
Sbjct: 1   MAAAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDH 60

Query: 61  ENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITL 120
           ENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITL
Sbjct: 61  ENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITL 120

Query: 121 IKGIDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFK 180
           IKGIDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFK
Sbjct: 121 IKGIDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFK 180

Query: 181 ELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAF 240
           ELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAF
Sbjct: 181 ELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAF 240

Query: 241 ARIFCKGQVSTATFLESCGVADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQ 300
           ARIFCKGQVSTATFLESCGVADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQ
Sbjct: 241 ARIFCKGQVSTATFLESCGVADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQ 300

Query: 301 GPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQSHPEHT 351
           GPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQSHPEHT
Sbjct: 301 GPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQSHPEHT 351


>gi|33695088 glycerol-3-phosphate dehydrogenase 1 (soluble) [Homo
           sapiens]
          Length = 349

 Score =  524 bits (1350), Expect = e-149
 Identities = 249/347 (71%), Positives = 297/347 (85%)

Query: 4   APLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDHENV 63
           A  KVCIVGSGNWGSA+AKI+G N  +L +F   V MWVFEE + G+KLT+IIN  HENV
Sbjct: 2   ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENV 61

Query: 64  KYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKG 123
           KYLPGHKLP NVVA+ ++ +A +DAD+L+FV+PHQFI +ICD++ G +   A GI+LIKG
Sbjct: 62  KYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKG 121

Query: 124 IDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELL 183
           +DEGP GLKLIS++I E++GI +SVLMGANIA+EVA EKFCETTIG K    G L KEL+
Sbjct: 122 VDEGPNGLKLISEVIGERLGIPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELM 181

Query: 184 QTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARI 243
           QTPNFRITVV + DTVE+CGALKN+VAVGAGFCDGL  GDNTKAAVIRLGLMEMIAFA++
Sbjct: 182 QTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKL 241

Query: 244 FCKGQVSTATFLESCGVADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQ 303
           FC G VS+ATFLESCGVADLITTCYGGRNR+VAEAFARTGK+IE+LEKE+LNGQKLQGP+
Sbjct: 242 FCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPE 301

Query: 304 TSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQSHPEH 350
           T+ E+Y IL+ KGL+DKFPLF AVY++CYE +PV E + CLQ+HPEH
Sbjct: 302 TARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVGEFIHCLQNHPEH 348


>gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens]
          Length = 494

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 3  AAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEE-TVNGRKLTDIINNDH 60
          A P K+ +VG+G  GSAVA  +       Q F   V++ V+E+ TV GR  T  +N  H
Sbjct: 24 APPGKIAVVGAGIGGSAVAHFL------QQHFGPRVQIDVYEKGTVGGRLATISVNKQH 76


>gi|21955174 kinesin family member C2 [Homo sapiens]
          Length = 838

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 234 LMEMIAFARIFCKGQVSTATFLESC--GVADLITTCYGGRNRR 274
           L E+    R+ C+ +  T++ L S   G    +TTCY GR+RR
Sbjct: 403 LPELKGNIRVLCRLRPGTSSSLVSVEPGPGGTVTTCYRGRHRR 445


>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
           sapiens]
          Length = 387

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 259 GVADLITTCYGGRNRRVAEAFARTGKTIEELE---KEMLNGQKLQGPQTSAEVYRILKQK 315
           G A +I+     RN+  A+A  R  KTI ELE   K    G+    P+  A    +    
Sbjct: 246 GAAIIISVVCFARNKAKAKAKERNSKTIAELEPMTKINPRGESEAMPREDATQLEVTLPS 305

Query: 316 GLLDKFPLFTAVYQICYESRPVQE 339
            + +  P    + +  YE +P QE
Sbjct: 306 SIHETGP--DTIQEPDYEPKPTQE 327


>gi|33469968 minichromosome maintenance complex component 7 isoform
           1 [Homo sapiens]
          Length = 719

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 103 ICDEITGRVP-KKALGITLIKGIDEGPEGLKLISDI 137
           I  EI G    KKAL + L+ G+D+ P G+K+  +I
Sbjct: 340 IAPEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNI 375


>gi|33469922 minichromosome maintenance complex component 7 isoform
           2 [Homo sapiens]
          Length = 543

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 103 ICDEITGRVP-KKALGITLIKGIDEGPEGLKLISDI 137
           I  EI G    KKAL + L+ G+D+ P G+K+  +I
Sbjct: 164 IAPEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNI 199


>gi|21361454 pyrroline-5-carboxylate reductase family, member 2
           [Homo sapiens]
          Length = 320

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 40/252 (15%)

Query: 83  EAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKGIDEGPEGLKLIS-----DI 137
           E V+ +D+L   +    I  I DEI   V  + + ++   G+       KL++      +
Sbjct: 58  ETVKHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKV 117

Query: 138 IREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELLQTPNFRITV----V 193
           IR      + V  GA +            T    ++E+G L ++L+ +  F   V    +
Sbjct: 118 IRCMTNTPVVVQEGATV----------YATGTHALVEDGQLLEQLMSSVGFCTEVEEDLI 167

Query: 194 DDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQ----- 248
           D    +   G     +A+ A    G++ G   + A I+LG   ++  A++    +     
Sbjct: 168 DAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLA-IQLGAQALLGAAKMLLDSEQHPCQ 226

Query: 249 ------------VSTATFLESCGVADLITTCYGG---RNRRVAEAFARTGKTIEELEKEM 293
                       +    FLES G   L+         R R +     +   +   L+K +
Sbjct: 227 LKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTRELQSMADQEKISPAALKKTL 286

Query: 294 LNGQKLQGPQTS 305
           L+  KL+ P  S
Sbjct: 287 LDRVKLESPTVS 298


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,081,164
Number of Sequences: 37866
Number of extensions: 472781
Number of successful extensions: 1055
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1053
Number of HSP's gapped (non-prelim): 8
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.