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Search of human proteins with 239755865
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo
sapiens]
(106 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens] 218 8e-58
gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo ... 218 8e-58
gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo ... 218 8e-58
gi|62988344 P antigen family, member 3 (prostate associated) [Ho... 80 5e-16
gi|19747271 XAGE-3 protein [Homo sapiens] 78 1e-15
gi|19747269 XAGE-3 protein [Homo sapiens] 78 1e-15
gi|19747273 X antigen family, member 5 [Homo sapiens] 74 3e-14
gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens] 70 5e-13
gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens] 69 1e-12
gi|62632767 P antigen family, member 2B [Homo sapiens] 68 2e-12
gi|46409314 P antigen family, member 2 [Homo sapiens] 67 4e-12
gi|118601000 X antigen family, member 2-like [Homo sapiens] 56 7e-09
gi|19747283 XAGE-2 protein [Homo sapiens] 56 7e-09
gi|58761528 P antigen family, member 1 [Homo sapiens] 54 2e-08
gi|150010546 G antigen 10 [Homo sapiens] 51 2e-07
gi|66346725 piwi-like 1 [Homo sapiens] 49 9e-07
gi|5901986 G antigen, family C, 1 [Homo sapiens] 47 3e-06
gi|148491076 G antigen 2D [Homo sapiens] 45 1e-05
gi|7705379 G antigen 8 [Homo sapiens] 45 1e-05
gi|148528977 G antigen 13 [Homo sapiens] 45 1e-05
gi|187608830 G antigen 2E [Homo sapiens] 45 1e-05
gi|4503887 G antigen 6 [Homo sapiens] 45 1e-05
gi|4503885 G antigen 5 [Homo sapiens] 45 1e-05
gi|4503883 G antigen 4 [Homo sapiens] 45 1e-05
gi|98985822 G antigen 1 isoform 2 [Homo sapiens] 45 1e-05
gi|98985824 G antigen 1 isoform 1 [Homo sapiens] 45 1e-05
gi|148491062 G antigen 12J [Homo sapiens] 45 2e-05
gi|187761326 G antigen 2A [Homo sapiens] 43 5e-05
gi|148529018 G antigen 2B [Homo sapiens] 43 6e-05
gi|4503879 G antigen 2 [Homo sapiens] 43 6e-05
>gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]
Length = 106
Score = 218 bits (555), Expect = 8e-58
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
Query: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
>gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo
sapiens]
Length = 106
Score = 218 bits (555), Expect = 8e-58
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
Query: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
>gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo
sapiens]
Length = 106
Score = 218 bits (555), Expect = 8e-58
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1 MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
Query: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61 PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
sapiens]
Length = 113
Score = 79.7 bits (195), Expect = 5e-16
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 21 ARGRQNVQETSKPVGPVVVQQ-PSDEQPQKEEPLTESKDVMPGQERDEAAPKSQGPGLEA 79
+R R++ Q+++ PVG VV Q+ PS++Q Q+EEP ES+D PGQERDE A Q GL A
Sbjct: 11 SRERRDDQDSNHPVGAVVAQELPSNDQLQQEEPPIESQDYTPGQERDEGALDFQVLGLAA 70
Query: 80 DIQEVSQAKTGGKWGDDPYVKGE 102
+ E++++KTGG+ GD P VKGE
Sbjct: 71 YLWELTRSKTGGERGDGPNVKGE 93
>gi|19747271 XAGE-3 protein [Homo sapiens]
Length = 111
Score = 78.2 bits (191), Expect = 1e-15
Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 4/72 (5%)
Query: 34 VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
+GP++ +P DE+PQ+EEP TES+D PGQER D+ A ++Q P LEAD+QE+SQ+KTGG
Sbjct: 23 IGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTGG 80
Query: 92 KWGDDPYVKGEI 103
+ G+ P +G+I
Sbjct: 81 ECGNGPDDQGKI 92
>gi|19747269 XAGE-3 protein [Homo sapiens]
Length = 111
Score = 78.2 bits (191), Expect = 1e-15
Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 4/72 (5%)
Query: 34 VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
+GP++ +P DE+PQ+EEP TES+D PGQER D+ A ++Q P LEAD+QE+SQ+KTGG
Sbjct: 23 IGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTGG 80
Query: 92 KWGDDPYVKGEI 103
+ G+ P +G+I
Sbjct: 81 ECGNGPDDQGKI 92
>gi|19747273 X antigen family, member 5 [Homo sapiens]
Length = 108
Score = 73.6 bits (179), Expect = 3e-14
Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
Query: 34 VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
VGP++ +PS +PQ+EEP TES+D PGQ+R D+ A + Q P LEAD+QE+SQ+KTG
Sbjct: 20 VGPML--EPSVPEPQQEEPPTESQDHTPGQKREDDQGAAEIQVPNLEADLQELSQSKTGD 77
Query: 92 KWGDDPYVKGEI 103
+ GD P V+G+I
Sbjct: 78 ECGDSPDVQGKI 89
>gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
Length = 130
Score = 69.7 bits (169), Expect = 5e-13
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 11 DLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAA 69
D+ E ++ R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E A
Sbjct: 20 DMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79
Query: 70 PKSQGPGLEADIQEVSQAKTGGKWGDDPYVK 100
P QG +EA QE++ K GD P V+
Sbjct: 80 PAVQGTDVEAFQQELALLKIEDAPGDGPDVR 110
>gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]
Length = 110
Score = 68.6 bits (166), Expect = 1e-12
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 24 RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E AP QG +EA Q
Sbjct: 13 RGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQ 72
Query: 83 EVSQAKTGGKWGDDPYVK 100
E++ K GD P V+
Sbjct: 73 ELALLKIEDAPGDGPDVR 90
>gi|62632767 P antigen family, member 2B [Homo sapiens]
Length = 111
Score = 67.8 bits (164), Expect = 2e-12
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 24 RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+ +E AP QGP +EA Q
Sbjct: 14 RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENEGAPAVQGPDMEAFQQ 73
Query: 83 EVSQAKTGGKWGDDPYVK 100
E++ K + GD P V+
Sbjct: 74 ELALLKIEDEPGDGPDVR 91
>gi|46409314 P antigen family, member 2 [Homo sapiens]
Length = 111
Score = 66.6 bits (161), Expect = 4e-12
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 24 RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+ ++A P QGP +EA Q
Sbjct: 14 RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQ 73
Query: 83 EVSQAKTGGKWGDDPYVK 100
E++ K + GD P V+
Sbjct: 74 ELALLKIEDEPGDGPDVR 91
>gi|118601000 X antigen family, member 2-like [Homo sapiens]
Length = 111
Score = 55.8 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 41 QPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
+P+DE+P++E+P T+S++ P Q+R D+ A + Q P LEAD+QE+ Q KTG
Sbjct: 28 EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEIQVPDLEADLQELCQTKTGDGCEGGTD 87
Query: 99 VKGEI 103
VKG+I
Sbjct: 88 VKGKI 92
>gi|19747283 XAGE-2 protein [Homo sapiens]
Length = 111
Score = 55.8 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 41 QPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
+P+DE+P++E+P T+S++ P Q+R D+ A + Q P LEAD+QE+ Q KTG
Sbjct: 28 EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEIQVPDLEADLQELCQTKTGDGCEGGTD 87
Query: 99 VKGEI 103
VKG+I
Sbjct: 88 VKGKI 92
>gi|58761528 P antigen family, member 1 [Homo sapiens]
Length = 146
Score = 54.3 bits (129), Expect = 2e-08
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 40 QQPSDEQPQKEEPLTESKDVMPGQER-DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
++ SDEQP + E T+S+D P +ER DE A +QG EAD QE+ Q KTG + GD P
Sbjct: 21 EESSDEQPDEVESPTQSQDSTPAEEREDEGASAAQGQEPEADSQELVQPKTGCELGDGPD 80
Query: 99 VK 100
K
Sbjct: 81 TK 82
>gi|150010546 G antigen 10 [Homo sapiens]
Length = 116
Score = 50.8 bits (120), Expect = 2e-07
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP++ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE
Sbjct: 18 EPPEMIGPMLPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77
Query: 84 VSQAKTGGKWGDDP 97
KTG + GD P
Sbjct: 78 QVHPKTGCECGDGP 91
>gi|66346725 piwi-like 1 [Homo sapiens]
Length = 861
Score = 48.9 bits (115), Expect = 9e-07
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 21 ARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMPGQERDEA--APKSQGPGLE 78
ARGR QET++ VG QQP QP+ + P E + G++R A KSQG +
Sbjct: 9 ARGRARGQETAQLVGSTASQQPGYIQPRPQPPPAEGELFGRGRQRGTAGGTAKSQGLQIS 68
Query: 79 ADIQEVSQAKTGGKWGD 95
A QE+S A+ GG+ D
Sbjct: 69 AGFQELSLAERGGRRRD 85
>gi|5901986 G antigen, family C, 1 [Homo sapiens]
Length = 102
Score = 47.0 bits (110), Expect = 3e-06
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 21 ARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMPGQERDEAAPKSQGPGLEAD 80
+RGR + QE P VV + + Q+EEP T+++D+ PGQER E P + +E D
Sbjct: 9 SRGRGDGQEA-----PDVVAFVAPGESQQEEPPTDNQDIEPGQER-EGTPPIEERKVEGD 62
Query: 81 IQEVSQAKTGGKWGDDPYVK 100
QE+ KT + GD VK
Sbjct: 63 CQEMDLEKTRSERGDGSDVK 82
>gi|148491076 G antigen 2D [Homo sapiens]
Length = 116
Score = 45.4 bits (106), Expect = 1e-05
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
>gi|7705379 G antigen 8 [Homo sapiens]
Length = 116
Score = 45.4 bits (106), Expect = 1e-05
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
>gi|148528977 G antigen 13 [Homo sapiens]
Length = 117
Score = 45.4 bits (106), Expect = 1e-05
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE
Sbjct: 19 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGEDEGASAGQGPKPEADSQE 78
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 79 QGHPQTGCECEDGP 92
>gi|187608830 G antigen 2E [Homo sapiens]
Length = 116
Score = 45.4 bits (106), Expect = 1e-05
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
>gi|4503887 G antigen 6 [Homo sapiens]
Length = 117
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
R R+ VQ + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP
Sbjct: 13 RPRRYVQPP-EVIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71
Query: 77 LEADIQEVSQAKTGGKWGDDP 97
EAD QE +TG + D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92
>gi|4503885 G antigen 5 [Homo sapiens]
Length = 117
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
R R+ VQ + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP
Sbjct: 13 RPRRYVQPP-EVIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71
Query: 77 LEADIQEVSQAKTGGKWGDDP 97
EAD QE +TG + D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92
>gi|4503883 G antigen 4 [Homo sapiens]
Length = 117
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
R R+ VQ +GP+ +Q SDE P++ EP T+ +D QE DE A QGP
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71
Query: 77 LEADIQEVSQAKTGGKWGDDP 97
EAD QE +TG + D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92
>gi|98985822 G antigen 1 isoform 2 [Homo sapiens]
Length = 117
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
R R+ VQ +GP+ +Q SDE P++ EP T+ +D QE DE A QGP
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71
Query: 77 LEADIQEVSQAKTGGKWGDDP 97
EAD QE +TG + D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92
>gi|98985824 G antigen 1 isoform 1 [Homo sapiens]
Length = 139
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
R R+ VQ +GP+ +Q SDE P++ EP T+ +D QE DE A QGP
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71
Query: 77 LEADIQEVSQAKTGGKWGDDP 97
EAD QE +TG + D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92
>gi|148491062 G antigen 12J [Homo sapiens]
Length = 117
Score = 44.7 bits (104), Expect = 2e-05
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 34 VGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQEVSQAK 88
+GP+ +Q SDE P++ EP T+ +D QE DE A QGP EAD QE +
Sbjct: 24 IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83
Query: 89 TGGKWGDDP 97
TG + D P
Sbjct: 84 TGCECEDGP 92
>gi|187761326 G antigen 2A [Homo sapiens]
Length = 116
Score = 43.1 bits (100), Expect = 5e-05
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE +DE A QGP EA QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
>gi|148529018 G antigen 2B [Homo sapiens]
Length = 116
Score = 42.7 bits (99), Expect = 6e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EA QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
>gi|4503879 G antigen 2 [Homo sapiens]
Length = 116
Score = 42.7 bits (99), Expect = 6e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
E + +GP+ +Q SDE P++ EP T+ +D QE DE A QGP EA QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77
Query: 84 VSQAKTGGKWGDDP 97
+TG + D P
Sbjct: 78 QGHPQTGCECEDGP 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,706,360
Number of Sequences: 37866
Number of extensions: 226092
Number of successful extensions: 1103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 926
Number of HSP's gapped (non-prelim): 226
length of query: 106
length of database: 18,247,518
effective HSP length: 76
effective length of query: 30
effective length of database: 15,369,702
effective search space: 461091060
effective search space used: 461091060
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.