BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|117190262 diphthine synthase isoform a [Homo sapiens] (285 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|117190326 diphthine synthase isoform a [Homo sapiens] 564 e-161 gi|117190262 diphthine synthase isoform a [Homo sapiens] 564 e-161 gi|117190324 diphthine synthase isoform b [Homo sapiens] 558 e-159 gi|38504671 secernin 3 [Homo sapiens] 31 1.1 gi|194097432 hypothetical protein LOC285966 B [Homo sapiens] 29 4.1 gi|194097428 hypothetical protein LOC285966 A [Homo sapiens] 29 4.1 gi|194097425 hypothetical protein LOC285966 A [Homo sapiens] 29 4.1 gi|21362074 testes development-related NYD-SP22 isoform 1 [Homo ... 28 7.0 gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 28 9.2 gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 28 9.2 gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens] 28 9.2 gi|62953116 BTB (POZ) domain containing 11 isoform b [Homo sapiens] 28 9.2 gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens] 28 9.2 >gi|117190326 diphthine synthase isoform a [Homo sapiens] Length = 285 Score = 564 bits (1454), Expect = e-161 Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240 Query: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL Sbjct: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285 >gi|117190262 diphthine synthase isoform a [Homo sapiens] Length = 285 Score = 564 bits (1454), Expect = e-161 Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240 Query: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL Sbjct: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285 >gi|117190324 diphthine synthase isoform b [Homo sapiens] Length = 284 Score = 558 bits (1438), Expect = e-159 Identities = 284/285 (99%), Positives = 284/285 (99%), Gaps = 1/285 (0%) Query: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE Sbjct: 1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEALEEFYGRKLVVADREE 60 Query: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC Sbjct: 61 VEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGCC 120 Query: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK Sbjct: 121 GLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRK 180 Query: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQM 240 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP VTEETLCVGLARVGADDQKIAAGTLRQM Sbjct: 181 IYEPPRYMSVNQAAQQLLEIVQNQRIRGEEP-VTEETLCVGLARVGADDQKIAAGTLRQM 239 Query: 241 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 285 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL Sbjct: 240 CTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENSSESQSINGL 284 >gi|38504671 secernin 3 [Homo sapiens] Length = 424 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 158 HTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQN 203 H LLD LE+L+K + ++P R + Q QQ LE+V N Sbjct: 317 HISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNN 362 >gi|194097432 hypothetical protein LOC285966 B [Homo sapiens] Length = 564 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEE------TLCVGLARVGADDQKIAAGTLR 238 P Y+S+++ +++L + E P ++ +L GLA G D ++A G Sbjct: 175 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 234 Query: 239 QMCTVDLGEPLHSLIITGGSIHP 261 C+ L H + + I+P Sbjct: 235 WTCSSSLYPSKHPITVEINGINP 257 >gi|194097428 hypothetical protein LOC285966 A [Homo sapiens] Length = 845 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEE------TLCVGLARVGADDQKIAAGTLR 238 P Y+S+++ +++L + E P ++ +L GLA G D ++A G Sbjct: 456 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 515 Query: 239 QMCTVDLGEPLHSLIITGGSIHP 261 C+ L H + + I+P Sbjct: 516 WTCSSSLYPSKHPITVEINGINP 538 >gi|194097425 hypothetical protein LOC285966 A [Homo sapiens] Length = 845 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEE------TLCVGLARVGADDQKIAAGTLR 238 P Y+S+++ +++L + E P ++ +L GLA G D ++A G Sbjct: 456 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 515 Query: 239 QMCTVDLGEPLHSLIITGGSIHP 261 C+ L H + + I+P Sbjct: 516 WTCSSSLYPSKHPITVEINGINP 538 >gi|21362074 testes development-related NYD-SP22 isoform 1 [Homo sapiens] Length = 262 Score = 28.5 bits (62), Expect = 7.0 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 7/86 (8%) Query: 136 WTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQ 195 W +TWR E + + L KE +E ++G + PPR +N + Sbjct: 106 WYNTWRMEPYNSSCCNKYTTYLPRL------PKEARMETAVRGMPLECPPRPERLNAYER 159 Query: 196 QLLEIVQNQRIRGEE-PAVTEETLCV 220 +++ + N R ++ P +T CV Sbjct: 160 EVMVNMLNSLSRNQQLPRITPRCGCV 185 >gi|225543215 antigen identified by monoclonal antibody Ki-67 isoform 2 [Homo sapiens] Length = 2896 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 166 KVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIV--QNQRIRGEEPAVTEETLCVGLA 223 K K Q+LE+L +++++ + + + ++ +Q + PA ++ L L Sbjct: 1219 KEKAQALEDLAGFKELFQTRGHTEESMTNDKTAKVACKSSQPDPDKNPASSKRRLKTSLG 1278 Query: 224 RVGADDQKIAAGTLRQMCTVDLGEPLHS 251 +VG ++ +A G L Q GE H+ Sbjct: 1279 KVGVKEELLAVGKLTQTS----GETTHT 1302 >gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform 1 [Homo sapiens] Length = 3256 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 166 KVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIV--QNQRIRGEEPAVTEETLCVGLA 223 K K Q+LE+L +++++ + + + ++ +Q + PA ++ L L Sbjct: 1579 KEKAQALEDLAGFKELFQTRGHTEESMTNDKTAKVACKSSQPDPDKNPASSKRRLKTSLG 1638 Query: 224 RVGADDQKIAAGTLRQMCTVDLGEPLHS 251 +VG ++ +A G L Q GE H+ Sbjct: 1639 KVGVKEELLAVGKLTQTS----GETTHT 1662 >gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens] Length = 501 Score = 28.1 bits (61), Expect = 9.2 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 17/87 (19%) Query: 166 KVKEQSLENLIKG--RKI------YEPPRYMSVNQAAQ----QLLEIVQNQRIRGEEPAV 213 +V+E EN K RKI ++ P + ++QAA+ +L+E+ Q+QRI EE A+ Sbjct: 223 EVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLMEVEQDQRITAEE-AI 281 Query: 214 TEETLCVGLARVGADDQKIAAGTLRQM 240 + E ++ A D+ I G Q+ Sbjct: 282 SHE----WISGNAASDKNIKDGVCAQI 304 >gi|62953116 BTB (POZ) domain containing 11 isoform b [Homo sapiens] Length = 641 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 52 KLVVADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRAT 99 KL R++ + + L + ++SDV FLV G PF A H L+ A+ Sbjct: 437 KLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYA--HKVLLFTAS 482 >gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens] Length = 1104 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 52 KLVVADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRAT 99 KL R++ + + L + ++SDV FLV G PF A H L+ A+ Sbjct: 900 KLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYA--HKVLLFTAS 945 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,860,620 Number of Sequences: 37866 Number of extensions: 399201 Number of successful extensions: 872 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 865 Number of HSP's gapped (non-prelim): 15 length of query: 285 length of database: 18,247,518 effective HSP length: 101 effective length of query: 184 effective length of database: 14,423,052 effective search space: 2653841568 effective search space used: 2653841568 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.