Guide to the Human Genome
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Search of human proteins with 239744657

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo
sapiens]
         (106 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]      218   8e-58
gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo ...   218   8e-58
gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo ...   218   8e-58
gi|62988344 P antigen family, member 3 (prostate associated) [Ho...    80   5e-16
gi|19747271 XAGE-3 protein [Homo sapiens]                              78   1e-15
gi|19747269 XAGE-3 protein [Homo sapiens]                              78   1e-15
gi|19747273 X antigen family, member 5 [Homo sapiens]                  74   3e-14
gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]        70   5e-13
gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]        69   1e-12
gi|62632767 P antigen family, member 2B [Homo sapiens]                 68   2e-12
gi|46409314 P antigen family, member 2 [Homo sapiens]                  67   4e-12
gi|118601000 X antigen family, member 2-like [Homo sapiens]            56   7e-09
gi|19747283 XAGE-2 protein [Homo sapiens]                              56   7e-09
gi|58761528 P antigen family, member 1 [Homo sapiens]                  54   2e-08
gi|150010546 G antigen 10 [Homo sapiens]                               51   2e-07
gi|66346725 piwi-like 1 [Homo sapiens]                                 49   9e-07
gi|5901986 G antigen, family C, 1 [Homo sapiens]                       47   3e-06
gi|148491076 G antigen 2D [Homo sapiens]                               45   1e-05
gi|7705379 G antigen 8 [Homo sapiens]                                  45   1e-05
gi|148528977 G antigen 13 [Homo sapiens]                               45   1e-05
gi|187608830 G antigen 2E [Homo sapiens]                               45   1e-05
gi|4503887 G antigen 6 [Homo sapiens]                                  45   1e-05
gi|4503885 G antigen 5 [Homo sapiens]                                  45   1e-05
gi|4503883 G antigen 4 [Homo sapiens]                                  45   1e-05
gi|98985822 G antigen 1 isoform 2 [Homo sapiens]                       45   1e-05
gi|98985824 G antigen 1 isoform 1 [Homo sapiens]                       45   1e-05
gi|148491062 G antigen 12J [Homo sapiens]                              45   2e-05
gi|187761326 G antigen 2A [Homo sapiens]                               43   5e-05
gi|148529018 G antigen 2B [Homo sapiens]                               43   6e-05
gi|4503879 G antigen 2 [Homo sapiens]                                  43   6e-05

>gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]
          Length = 106

 Score =  218 bits (555), Expect = 8e-58
 Identities = 106/106 (100%), Positives = 106/106 (100%)

Query: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
           MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60

Query: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
           PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106


>gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo
           sapiens]
          Length = 106

 Score =  218 bits (555), Expect = 8e-58
 Identities = 106/106 (100%), Positives = 106/106 (100%)

Query: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
           MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60

Query: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
           PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106


>gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo
           sapiens]
          Length = 106

 Score =  218 bits (555), Expect = 8e-58
 Identities = 106/106 (100%), Positives = 106/106 (100%)

Query: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60
           MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM
Sbjct: 1   MQKGINITSTDLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVM 60

Query: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106
           PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI
Sbjct: 61  PGQERDEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPYVKGEIYQI 106


>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
           sapiens]
          Length = 113

 Score = 79.7 bits (195), Expect = 5e-16
 Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)

Query: 21  ARGRQNVQETSKPVGPVVVQQ-PSDEQPQKEEPLTESKDVMPGQERDEAAPKSQGPGLEA 79
           +R R++ Q+++ PVG VV Q+ PS++Q Q+EEP  ES+D  PGQERDE A   Q  GL A
Sbjct: 11  SRERRDDQDSNHPVGAVVAQELPSNDQLQQEEPPIESQDYTPGQERDEGALDFQVLGLAA 70

Query: 80  DIQEVSQAKTGGKWGDDPYVKGE 102
            + E++++KTGG+ GD P VKGE
Sbjct: 71  YLWELTRSKTGGERGDGPNVKGE 93


>gi|19747271 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 4/72 (5%)

Query: 34  VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
           +GP++  +P DE+PQ+EEP TES+D  PGQER  D+ A ++Q P LEAD+QE+SQ+KTGG
Sbjct: 23  IGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTGG 80

Query: 92  KWGDDPYVKGEI 103
           + G+ P  +G+I
Sbjct: 81  ECGNGPDDQGKI 92


>gi|19747269 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 4/72 (5%)

Query: 34  VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
           +GP++  +P DE+PQ+EEP TES+D  PGQER  D+ A ++Q P LEAD+QE+SQ+KTGG
Sbjct: 23  IGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAETQVPDLEADLQELSQSKTGG 80

Query: 92  KWGDDPYVKGEI 103
           + G+ P  +G+I
Sbjct: 81  ECGNGPDDQGKI 92


>gi|19747273 X antigen family, member 5 [Homo sapiens]
          Length = 108

 Score = 73.6 bits (179), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 4/72 (5%)

Query: 34  VGPVVVQQPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGG 91
           VGP++  +PS  +PQ+EEP TES+D  PGQ+R  D+ A + Q P LEAD+QE+SQ+KTG 
Sbjct: 20  VGPML--EPSVPEPQQEEPPTESQDHTPGQKREDDQGAAEIQVPNLEADLQELSQSKTGD 77

Query: 92  KWGDDPYVKGEI 103
           + GD P V+G+I
Sbjct: 78  ECGDSPDVQGKI 89


>gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
          Length = 130

 Score = 69.7 bits (169), Expect = 5e-13
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 11  DLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAA 69
           D+ E     ++  R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E A
Sbjct: 20  DMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79

Query: 70  PKSQGPGLEADIQEVSQAKTGGKWGDDPYVK 100
           P  QG  +EA  QE++  K     GD P V+
Sbjct: 80  PAVQGTDVEAFQQELALLKIEDAPGDGPDVR 110


>gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]
          Length = 110

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
           R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E AP  QG  +EA  Q
Sbjct: 13  RGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQ 72

Query: 83  EVSQAKTGGKWGDDPYVK 100
           E++  K     GD P V+
Sbjct: 73  ELALLKIEDAPGDGPDVR 90


>gi|62632767 P antigen family, member 2B [Homo sapiens]
          Length = 111

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
           R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+  +E AP  QGP +EA  Q
Sbjct: 14  RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENEGAPAVQGPDMEAFQQ 73

Query: 83  EVSQAKTGGKWGDDPYVK 100
           E++  K   + GD P V+
Sbjct: 74  ELALLKIEDEPGDGPDVR 91


>gi|46409314 P antigen family, member 2 [Homo sapiens]
          Length = 111

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82
           R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+  ++A P  QGP +EA  Q
Sbjct: 14  RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQ 73

Query: 83  EVSQAKTGGKWGDDPYVK 100
           E++  K   + GD P V+
Sbjct: 74  ELALLKIEDEPGDGPDVR 91


>gi|118601000 X antigen family, member 2-like [Homo sapiens]
          Length = 111

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 41  QPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
           +P+DE+P++E+P T+S++  P Q+R  D+ A + Q P LEAD+QE+ Q KTG        
Sbjct: 28  EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEIQVPDLEADLQELCQTKTGDGCEGGTD 87

Query: 99  VKGEI 103
           VKG+I
Sbjct: 88  VKGKI 92


>gi|19747283 XAGE-2 protein [Homo sapiens]
          Length = 111

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 41  QPSDEQPQKEEPLTESKDVMPGQER--DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
           +P+DE+P++E+P T+S++  P Q+R  D+ A + Q P LEAD+QE+ Q KTG        
Sbjct: 28  EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEIQVPDLEADLQELCQTKTGDGCEGGTD 87

Query: 99  VKGEI 103
           VKG+I
Sbjct: 88  VKGKI 92


>gi|58761528 P antigen family, member 1 [Homo sapiens]
          Length = 146

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 40  QQPSDEQPQKEEPLTESKDVMPGQER-DEAAPKSQGPGLEADIQEVSQAKTGGKWGDDPY 98
           ++ SDEQP + E  T+S+D  P +ER DE A  +QG   EAD QE+ Q KTG + GD P 
Sbjct: 21  EESSDEQPDEVESPTQSQDSTPAEEREDEGASAAQGQEPEADSQELVQPKTGCELGDGPD 80

Query: 99  VK 100
            K
Sbjct: 81  TK 82


>gi|150010546 G antigen 10 [Homo sapiens]
          Length = 116

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP++ +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE
Sbjct: 18 EPPEMIGPMLPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              KTG + GD P
Sbjct: 78 QVHPKTGCECGDGP 91


>gi|66346725 piwi-like 1 [Homo sapiens]
          Length = 861

 Score = 48.9 bits (115), Expect = 9e-07
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 21 ARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMPGQERDEA--APKSQGPGLE 78
          ARGR   QET++ VG    QQP   QP+ + P  E +    G++R  A    KSQG  + 
Sbjct: 9  ARGRARGQETAQLVGSTASQQPGYIQPRPQPPPAEGELFGRGRQRGTAGGTAKSQGLQIS 68

Query: 79 ADIQEVSQAKTGGKWGD 95
          A  QE+S A+ GG+  D
Sbjct: 69 AGFQELSLAERGGRRRD 85


>gi|5901986 G antigen, family C, 1 [Homo sapiens]
          Length = 102

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 21  ARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMPGQERDEAAPKSQGPGLEAD 80
           +RGR + QE      P VV   +  + Q+EEP T+++D+ PGQER E  P  +   +E D
Sbjct: 9   SRGRGDGQEA-----PDVVAFVAPGESQQEEPPTDNQDIEPGQER-EGTPPIEERKVEGD 62

Query: 81  IQEVSQAKTGGKWGDDPYVK 100
            QE+   KT  + GD   VK
Sbjct: 63  CQEMDLEKTRSERGDGSDVK 82


>gi|148491076 G antigen 2D [Homo sapiens]
          Length = 116

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


>gi|7705379 G antigen 8 [Homo sapiens]
          Length = 116

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


>gi|148528977 G antigen 13 [Homo sapiens]
          Length = 117

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE
Sbjct: 19 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGEDEGASAGQGPKPEADSQE 78

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 79 QGHPQTGCECEDGP 92


>gi|187608830 G antigen 2E [Homo sapiens]
          Length = 116

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


>gi|4503887 G antigen 6 [Homo sapiens]
          Length = 117

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
          R R+ VQ   + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP 
Sbjct: 13 RPRRYVQPP-EVIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71

Query: 77 LEADIQEVSQAKTGGKWGDDP 97
           EAD QE    +TG +  D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92


>gi|4503885 G antigen 5 [Homo sapiens]
          Length = 117

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
          R R+ VQ   + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP 
Sbjct: 13 RPRRYVQPP-EVIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71

Query: 77 LEADIQEVSQAKTGGKWGDDP 97
           EAD QE    +TG +  D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92


>gi|4503883 G antigen 4 [Homo sapiens]
          Length = 117

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
          R R+ VQ     +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP 
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71

Query: 77 LEADIQEVSQAKTGGKWGDDP 97
           EAD QE    +TG +  D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92


>gi|98985822 G antigen 1 isoform 2 [Homo sapiens]
          Length = 117

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
          R R+ VQ     +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP 
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71

Query: 77 LEADIQEVSQAKTGGKWGDDP 97
           EAD QE    +TG +  D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92


>gi|98985824 G antigen 1 isoform 1 [Homo sapiens]
          Length = 139

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 22 RGRQNVQETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPG 76
          R R+ VQ     +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP 
Sbjct: 13 RPRRYVQPPEM-IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPK 71

Query: 77 LEADIQEVSQAKTGGKWGDDP 97
           EAD QE    +TG +  D P
Sbjct: 72 PEADSQEQGHPQTGCECEDGP 92


>gi|148491062 G antigen 12J [Homo sapiens]
          Length = 117

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 34 VGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQEVSQAK 88
          +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EAD QE    +
Sbjct: 24 IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83

Query: 89 TGGKWGDDP 97
          TG +  D P
Sbjct: 84 TGCECEDGP 92


>gi|187761326 G antigen 2A [Homo sapiens]
          Length = 116

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE +DE A   QGP  EA  QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


>gi|148529018 G antigen 2B [Homo sapiens]
          Length = 116

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EA  QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


>gi|4503879 G antigen 2 [Homo sapiens]
          Length = 116

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 29 ETSKPVGPVVVQQPSDE----QPQKEEPLTESKDVMPGQE-RDEAAPKSQGPGLEADIQE 83
          E  + +GP+  +Q SDE     P++ EP T+ +D    QE  DE A   QGP  EA  QE
Sbjct: 18 EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77

Query: 84 VSQAKTGGKWGDDP 97
              +TG +  D P
Sbjct: 78 QGHPQTGCECEDGP 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.305    0.128    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,706,360
Number of Sequences: 37866
Number of extensions: 226092
Number of successful extensions: 1103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 926
Number of HSP's gapped (non-prelim): 226
length of query: 106
length of database: 18,247,518
effective HSP length: 76
effective length of query: 30
effective length of database: 15,369,702
effective search space: 461091060
effective search space used: 461091060
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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