Search of human proteins with 239740978

Search of human proteins with 239740978

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239740978 PREDICTED: hypothetical protein XP_002344292 [Homo
sapiens]
         (85 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169172800 PREDICTED: similar to Putative uncharacterized prot...   171   1e-43
gi|239742767 PREDICTED: hypothetical protein XP_002342632 [Homo ...   171   1e-43
gi|239740988 PREDICTED: hypothetical protein XP_002342052 [Homo ...   171   1e-43
gi|239740978 PREDICTED: hypothetical protein XP_002344292 [Homo ...   171   1e-43
gi|239741480 PREDICTED: hypothetical protein XP_002342211 [Homo ...   166   4e-42
gi|239742771 PREDICTED: hypothetical protein XP_002342648 [Homo ...    94   2e-20
gi|153252198 septin 14 [Homo sapiens]                                  94   2e-20
gi|8922712 septin 11 [Homo sapiens]                                    44   3e-05
gi|149363664 septin 8 isoform d [Homo sapiens]                         39   9e-04
gi|149363638 septin 8 isoform c [Homo sapiens]                         39   9e-04
gi|149363689 septin 8 isoform a [Homo sapiens]                         39   9e-04
gi|149363661 septin 8 isoform b [Homo sapiens]                         39   9e-04
gi|30795193 septin 10 isoform 2 [Homo sapiens]                         39   9e-04
gi|21945064 septin 10 isoform 1 [Homo sapiens]                         39   9e-04
gi|21361478 septin 6 isoform B [Homo sapiens]                          36   0.006
gi|22035581 septin 6 isoform D [Homo sapiens]                          36   0.007
gi|22035579 septin 6 isoform A [Homo sapiens]                          36   0.007
gi|22035577 septin 6 isoform A [Homo sapiens]                          36   0.007
gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens]           31   0.24 
gi|4758462 glypican 3 [Homo sapiens]                                   31   0.24 
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr...    30   0.41 
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr...    30   0.41 
gi|38044112 restin isoform b [Homo sapiens]                            30   0.54 
gi|4506751 restin isoform a [Homo sapiens]                             30   0.54 
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             30   0.54 
gi|27477095 nuclear receptor binding SET domain protein 1 isofor...    29   0.70 
gi|19923586 nuclear receptor binding SET domain protein 1 isofor...    29   0.70 
gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo s...    29   0.91 
gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo s...    29   0.91 
gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo s...    29   0.91 

>gi|169172800 PREDICTED: similar to Putative uncharacterized
          protein C20orf69 [Homo sapiens]
          Length = 85

 Score =  171 bits (432), Expect = 1e-43
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK
Sbjct: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60

Query: 61 HPGFNEELTITLLIIQKHVAGLSHF 85
          HPGFNEELTITLLIIQKHVAGLSHF
Sbjct: 61 HPGFNEELTITLLIIQKHVAGLSHF 85


>gi|239742767 PREDICTED: hypothetical protein XP_002342632 [Homo
          sapiens]
          Length = 85

 Score =  171 bits (432), Expect = 1e-43
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK
Sbjct: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60

Query: 61 HPGFNEELTITLLIIQKHVAGLSHF 85
          HPGFNEELTITLLIIQKHVAGLSHF
Sbjct: 61 HPGFNEELTITLLIIQKHVAGLSHF 85


>gi|239740988 PREDICTED: hypothetical protein XP_002342052 [Homo
          sapiens]
          Length = 85

 Score =  171 bits (432), Expect = 1e-43
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK
Sbjct: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60

Query: 61 HPGFNEELTITLLIIQKHVAGLSHF 85
          HPGFNEELTITLLIIQKHVAGLSHF
Sbjct: 61 HPGFNEELTITLLIIQKHVAGLSHF 85


>gi|239740978 PREDICTED: hypothetical protein XP_002344292 [Homo
          sapiens]
          Length = 85

 Score =  171 bits (432), Expect = 1e-43
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK
Sbjct: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60

Query: 61 HPGFNEELTITLLIIQKHVAGLSHF 85
          HPGFNEELTITLLIIQKHVAGLSHF
Sbjct: 61 HPGFNEELTITLLIIQKHVAGLSHF 85


>gi|239741480 PREDICTED: hypothetical protein XP_002342211 [Homo
          sapiens]
          Length = 85

 Score =  166 bits (420), Expect = 4e-42
 Identities = 83/85 (97%), Positives = 84/85 (98%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK
Sbjct: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60

Query: 61 HPGFNEELTITLLIIQKHVAGLSHF 85
          HPGF+EELTITLLIIQKHVA LSHF
Sbjct: 61 HPGFSEELTITLLIIQKHVADLSHF 85


>gi|239742771 PREDICTED: hypothetical protein XP_002342648 [Homo
          sapiens]
          Length = 81

 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 1  MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH 47
          MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH
Sbjct: 13 MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH 59


>gi|153252198 septin 14 [Homo sapiens]
          Length = 432

 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 1   MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH 47
           MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH
Sbjct: 383 MIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKH 429


>gi|8922712 septin 11 [Homo sapiens]
          Length = 429

 Score = 43.9 bits (102), Expect = 3e-05
 Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 4/47 (8%)

Query: 4   QEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQL----STDTKKDK 46
           QEE +K+E++KK+LE E+ +F K KAA++ LQ+Q     +  TKKDK
Sbjct: 375 QEEKKKVEDKKKELEEEVNNFQKKKAAAQLLQSQAQQSGAQQTKKDK 421


>gi|149363664 septin 8 isoform d [Homo sapiens]
          Length = 369

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + QEE RK+EE++++LE E   F + KAA EALQ+Q
Sbjct: 316 VHQEEKRKVEEKRRELEEETNAFNRRKAAVEALQSQ 351


>gi|149363638 septin 8 isoform c [Homo sapiens]
          Length = 442

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + QEE RK+EE++++LE E   F + KAA EALQ+Q
Sbjct: 376 VHQEEKRKVEEKRRELEEETNAFNRRKAAVEALQSQ 411


>gi|149363689 septin 8 isoform a [Homo sapiens]
          Length = 483

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + QEE RK+EE++++LE E   F + KAA EALQ+Q
Sbjct: 376 VHQEEKRKVEEKRRELEEETNAFNRRKAAVEALQSQ 411


>gi|149363661 septin 8 isoform b [Homo sapiens]
          Length = 429

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + QEE RK+EE++++LE E   F + KAA EALQ+Q
Sbjct: 376 VHQEEKRKVEEKRRELEEETNAFNRRKAAVEALQSQ 411


>gi|30795193 septin 10 isoform 2 [Homo sapiens]
          Length = 431

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ----LSTDTKKDKHPDPYEFL 54
           + QEE  KLEE+++ LE EII F K KA SE   +Q      ++ +KDK      FL
Sbjct: 375 LHQEERMKLEEKRRLLEEEIIAFSKKKATSEIFHSQSFLATGSNLRKDKDRKNSNFL 431


>gi|21945064 septin 10 isoform 1 [Homo sapiens]
          Length = 454

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ----LSTDTKKDKHPDPYEFL 54
           + QEE  KLEE+++ LE EII F K KA SE   +Q      ++ +KDK      FL
Sbjct: 398 LHQEERMKLEEKRRLLEEEIIAFSKKKATSEIFHSQSFLATGSNLRKDKDRKNSNFL 454


>gi|21361478 septin 6 isoform B [Homo sapiens]
          Length = 434

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 9/56 (16%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ---------LSTDTKKDKHP 48
           + Q+E +KLE++KK L+ E+  F + K A+E LQ+Q         L  D +K  +P
Sbjct: 374 LHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKKNNP 429


>gi|22035581 septin 6 isoform D [Homo sapiens]
          Length = 429

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + Q+E +KLE++KK L+ E+  F + K A+E LQ+Q
Sbjct: 374 LHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409


>gi|22035579 septin 6 isoform A [Homo sapiens]
          Length = 427

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + Q+E +KLE++KK L+ E+  F + K A+E LQ+Q
Sbjct: 374 LHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409


>gi|22035577 septin 6 isoform A [Homo sapiens]
          Length = 427

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQ 37
           + Q+E +KLE++KK L+ E+  F + K A+E LQ+Q
Sbjct: 374 LHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409


>gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens]
          Length = 154

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 4   QEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIK 60
           Q+E  KLEE+KK LE EI++   +K   E    +LS   +    PD      + K++
Sbjct: 73  QQECEKLEEDKKMLEEEILN---LKTHMENNMVELSKLQEYKSEPDERAIQAVEKLE 126


>gi|4758462 glypican 3 [Homo sapiens]
          Length = 580

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 20  EIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIKH 61
           E+++ Y  KAA   ++ Q +    K K P+P    ++ K+KH
Sbjct: 427 ELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKH 468


>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
            repeats isoform 2 [Homo sapiens]
          Length = 1403

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 4    QEEIRKLEEEKKQLEG-EIIDFYKMKAASEALQTQLSTDTKK-----DKHPDPYEFLLLR 57
            Q E++  ++  K+LE  E++D  K KA    L+TQ+S+  +K      K+ +  E +L  
Sbjct: 1192 QSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHA 1251

Query: 58   KIKHPGFNEELTITLLIIQKHV 79
            K K     +E  +    I++ +
Sbjct: 1252 KKKEISAKDEKELLHFSIEQEI 1273


>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
            repeats isoform 1 [Homo sapiens]
          Length = 1416

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 4    QEEIRKLEEEKKQLEG-EIIDFYKMKAASEALQTQLSTDTKK-----DKHPDPYEFLLLR 57
            Q E++  ++  K+LE  E++D  K KA    L+TQ+S+  +K      K+ +  E +L  
Sbjct: 1205 QSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHA 1264

Query: 58   KIKHPGFNEELTITLLIIQKHV 79
            K K     +E  +    I++ +
Sbjct: 1265 KKKEISAKDEKELLHFSIEQEI 1286


>gi|38044112 restin isoform b [Homo sapiens]
          Length = 1392

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 3   QQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQL------STDTKKDKHPD 49
           QQE  +K EEEKK+LE ++ D  K    S     +L      +T   K KH +
Sbjct: 944 QQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEE 996


>gi|4506751 restin isoform a [Homo sapiens]
          Length = 1427

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 3    QQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQL------STDTKKDKHPD 49
            QQE  +K EEEKK+LE ++ D  K    S     +L      +T   K KH +
Sbjct: 979  QQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEE 1031


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 2   IQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRKIKH 61
           + QE   + EE   +++  + +  K+K   EAL T+LS  T KDK     + L   K + 
Sbjct: 819 LSQETKIQHEELNNRIQTTVTELQKVKMEKEALMTELS--TVKDKLSKVSDSLKNSKSEF 876

Query: 62  PGFNEELTITLLIIQKHVAGLSH 84
              N++    +L ++K    L H
Sbjct: 877 EKENQKGKAAILDLEKTCKELKH 899


>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
            [Homo sapiens]
          Length = 2427

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 14   KKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRK 58
            KK L+     F ++KA  E    QL  D K DK P PY+ + + +
Sbjct: 1566 KKALQEAAARFEELKAQKEL--RQLQEDRKNDKKPPPYKHIKVNR 1608


>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
            [Homo sapiens]
          Length = 2696

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 14   KKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDPYEFLLLRK 58
            KK L+     F ++KA  E    QL  D K DK P PY+ + + +
Sbjct: 1835 KKALQEAAARFEELKAQKEL--RQLQEDRKNDKKPPPYKHIKVNR 1877


>gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 5   EEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDP 50
           +E+RK+E  KK+ E    D  K+  A++    Q  T+ K  K   P
Sbjct: 249 QELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAPKKKLP 294


>gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 5   EEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDP 50
           +E+RK+E  KK+ E    D  K+  A++    Q  T+ K  K   P
Sbjct: 249 QELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAPKKKLP 294


>gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 5   EEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQLSTDTKKDKHPDP 50
           +E+RK+E  KK+ E    D  K+  A++    Q  T+ K  K   P
Sbjct: 249 QELRKIEARKKEREKRSQDLQKLITAADTTAEQRRTERKAPKKKLP 294


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,233,548
Number of Sequences: 37866
Number of extensions: 123415
Number of successful extensions: 1049
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 966
Number of HSP's gapped (non-prelim): 101
length of query: 85
length of database: 18,247,518
effective HSP length: 57
effective length of query: 28
effective length of database: 16,089,156
effective search space: 450496368
effective search space used: 450496368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.