Search of human proteins with 115583683

Search of human proteins with 115583683

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115583683 hypothetical protein LOC253714 [Homo sapiens]
         (1243 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115583683 hypothetical protein LOC253714 [Homo sapiens]           2484   0.0  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       40   0.014
gi|59710093 G-protein coupled receptor 112 [Homo sapiens]              38   0.069
gi|169167993 PREDICTED: hypothetical protein [Homo sapiens]            35   0.45 
gi|169167430 PREDICTED: hypothetical protein [Homo sapiens]            35   0.45 
gi|45827701 pad-1-like [Homo sapiens]                                  33   1.7  
gi|210031154 zinc finger protein 541 [Homo sapiens]                    33   2.2  
gi|50845407 chromosome 22 open reading frame 13 [Homo sapiens]         32   4.9  

>gi|115583683 hypothetical protein LOC253714 [Homo sapiens]
          Length = 1243

 Score = 2484 bits (6439), Expect = 0.0
 Identities = 1243/1243 (100%), Positives = 1243/1243 (100%)

Query: 1    MENCSAASTFLTDSLELELGTEWCKPPYFSCAVDNRGGGKHFSGESYLCSGALKRLILNL 60
            MENCSAASTFLTDSLELELGTEWCKPPYFSCAVDNRGGGKHFSGESYLCSGALKRLILNL
Sbjct: 1    MENCSAASTFLTDSLELELGTEWCKPPYFSCAVDNRGGGKHFSGESYLCSGALKRLILNL 60

Query: 61   DPLPTNFEEDTLEIFGIQWVTETALVNSSRELFHLFRQQLYNLETLLQSSCDFGKVSTLH 120
            DPLPTNFEEDTLEIFGIQWVTETALVNSSRELFHLFRQQLYNLETLLQSSCDFGKVSTLH
Sbjct: 61   DPLPTNFEEDTLEIFGIQWVTETALVNSSRELFHLFRQQLYNLETLLQSSCDFGKVSTLH 120

Query: 121  CKADNIRQQCVLFLHYVKVFIFRYLKVQNAESHVPVHPYEALEAQLPSVLIDELHGLLLY 180
            CKADNIRQQCVLFLHYVKVFIFRYLKVQNAESHVPVHPYEALEAQLPSVLIDELHGLLLY
Sbjct: 121  CKADNIRQQCVLFLHYVKVFIFRYLKVQNAESHVPVHPYEALEAQLPSVLIDELHGLLLY 180

Query: 181  IGHLSELPSVNIGAFVNQNQIKLFPPSWHLLHLHLDIHWLVLEILYMLGEKLKQVVYGHQ 240
            IGHLSELPSVNIGAFVNQNQIKLFPPSWHLLHLHLDIHWLVLEILYMLGEKLKQVVYGHQ
Sbjct: 181  IGHLSELPSVNIGAFVNQNQIKLFPPSWHLLHLHLDIHWLVLEILYMLGEKLKQVVYGHQ 240

Query: 241  FMNLASDNLTNISLFEEHCETLLCDLISLSLNRYDKVRSSESLMSDQCPCLCIKELWVLL 300
            FMNLASDNLTNISLFEEHCETLLCDLISLSLNRYDKVRSSESLMSDQCPCLCIKELWVLL
Sbjct: 241  FMNLASDNLTNISLFEEHCETLLCDLISLSLNRYDKVRSSESLMSDQCPCLCIKELWVLL 300

Query: 301  IHLLDHRSKWFVSESFWNWLNKLLKTLLEKSSDRRRSSMPVIQSRDPLGFSWWIITHVAS 360
            IHLLDHRSKWFVSESFWNWLNKLLKTLLEKSSDRRRSSMPVIQSRDPLGFSWWIITHVAS
Sbjct: 301  IHLLDHRSKWFVSESFWNWLNKLLKTLLEKSSDRRRSSMPVIQSRDPLGFSWWIITHVAS 360

Query: 361  FYKFDRHGVPDEMRKVESNWNFVEELLKKSISVQGVILEEQLRMYLHCCLTLCDFWEPNI 420
            FYKFDRHGVPDEMRKVESNWNFVEELLKKSISVQGVILEEQLRMYLHCCLTLCDFWEPNI
Sbjct: 361  FYKFDRHGVPDEMRKVESNWNFVEELLKKSISVQGVILEEQLRMYLHCCLTLCDFWEPNI 420

Query: 421  AIVTILWEYYSKNLNSSFSISWLPFKGLANTMKSPLSMLEMVKTCCCDKQDQELYKSSSS 480
            AIVTILWEYYSKNLNSSFSISWLPFKGLANTMKSPLSMLEMVKTCCCDKQDQELYKSSSS
Sbjct: 421  AIVTILWEYYSKNLNSSFSISWLPFKGLANTMKSPLSMLEMVKTCCCDKQDQELYKSSSS 480

Query: 481  YTIFLCILAKVVKKAMKSNGPHPWKQVKGRIYSKFHQKRMEELTEVGLQNFFSLFLLLAA 540
            YTIFLCILAKVVKKAMKSNGPHPWKQVKGRIYSKFHQKRMEELTEVGLQNFFSLFLLLAA
Sbjct: 481  YTIFLCILAKVVKKAMKSNGPHPWKQVKGRIYSKFHQKRMEELTEVGLQNFFSLFLLLAA 540

Query: 541  VAEVEDVASHVLDLLNFLKPAFVTSQRALIWKGHMAFLLMYAQKNLDIGVLAEKFSCAFR 600
            VAEVEDVASHVLDLLNFLKPAFVTSQRALIWKGHMAFLLMYAQKNLDIGVLAEKFSCAFR
Sbjct: 541  VAEVEDVASHVLDLLNFLKPAFVTSQRALIWKGHMAFLLMYAQKNLDIGVLAEKFSCAFR 600

Query: 601  EKAKEFLVSKNEEMVQRQTIWTLLSIYIDGVQEVFETSYCLYPSHEKLLNDGFSMLLRAC 660
            EKAKEFLVSKNEEMVQRQTIWTLLSIYIDGVQEVFETSYCLYPSHEKLLNDGFSMLLRAC
Sbjct: 601  EKAKEFLVSKNEEMVQRQTIWTLLSIYIDGVQEVFETSYCLYPSHEKLLNDGFSMLLRAC 660

Query: 661  RESELRTVLSFLQAVLARIRSMHQQLCQELQRDNVDLFVQSSLSAKERHLAAVASALWRH 720
            RESELRTVLSFLQAVLARIRSMHQQLCQELQRDNVDLFVQSSLSAKERHLAAVASALWRH
Sbjct: 661  RESELRTVLSFLQAVLARIRSMHQQLCQELQRDNVDLFVQSSLSAKERHLAAVASALWRH 720

Query: 721  FFSFLKSQRMSQVVPFSQLADAAADFTLLAMDMPSTAPSDFQPQPVISIIQLFGWDDIIC 780
            FFSFLKSQRMSQVVPFSQLADAAADFTLLAMDMPSTAPSDFQPQPVISIIQLFGWDDIIC
Sbjct: 721  FFSFLKSQRMSQVVPFSQLADAAADFTLLAMDMPSTAPSDFQPQPVISIIQLFGWDDIIC 780

Query: 781  PQVVARYLSHVLQNSTLCEALSHSGYVSFQALTVRSWIRCVLQMYIKNLSGPDDLLIDKN 840
            PQVVARYLSHVLQNSTLCEALSHSGYVSFQALTVRSWIRCVLQMYIKNLSGPDDLLIDKN
Sbjct: 781  PQVVARYLSHVLQNSTLCEALSHSGYVSFQALTVRSWIRCVLQMYIKNLSGPDDLLIDKN 840

Query: 841  LEEAVEKEYMKQLVKLTRLLFNLSEVKSIFSKAQVEYLSISEDPKKALVRFFEAVGVTYG 900
            LEEAVEKEYMKQLVKLTRLLFNLSEVKSIFSKAQVEYLSISEDPKKALVRFFEAVGVTYG
Sbjct: 841  LEEAVEKEYMKQLVKLTRLLFNLSEVKSIFSKAQVEYLSISEDPKKALVRFFEAVGVTYG 900

Query: 901  NVQTLSDKSAMVTKSLEYLGEVLKYIKPYLGKKVFSAGLQLTYGMMGILVKSWAQIFATS 960
            NVQTLSDKSAMVTKSLEYLGEVLKYIKPYLGKKVFSAGLQLTYGMMGILVKSWAQIFATS
Sbjct: 901  NVQTLSDKSAMVTKSLEYLGEVLKYIKPYLGKKVFSAGLQLTYGMMGILVKSWAQIFATS 960

Query: 961  KAQKLLFRIIDCLLLPHAVLQQEKELPAPMLSAIQKSLPLYLQGMCIVCCQSQNPNAYLN 1020
            KAQKLLFRIIDCLLLPHAVLQQEKELPAPMLSAIQKSLPLYLQGMCIVCCQSQNPNAYLN
Sbjct: 961  KAQKLLFRIIDCLLLPHAVLQQEKELPAPMLSAIQKSLPLYLQGMCIVCCQSQNPNAYLN 1020

Query: 1021 QLLGNVIEQYIGRFLPASPYVSDLGQHPVLLALRNTATIPPISSLKKCIVQVIRKSYLEY 1080
            QLLGNVIEQYIGRFLPASPYVSDLGQHPVLLALRNTATIPPISSLKKCIVQVIRKSYLEY
Sbjct: 1021 QLLGNVIEQYIGRFLPASPYVSDLGQHPVLLALRNTATIPPISSLKKCIVQVIRKSYLEY 1080

Query: 1081 KGSSPPPRLASILAFILQLFKETNTDIYEVELLLPGILKCLVLVSEPQVKRLATENLQYM 1140
            KGSSPPPRLASILAFILQLFKETNTDIYEVELLLPGILKCLVLVSEPQVKRLATENLQYM
Sbjct: 1081 KGSSPPPRLASILAFILQLFKETNTDIYEVELLLPGILKCLVLVSEPQVKRLATENLQYM 1140

Query: 1141 VKACQVGSEEEPSSQLTSVFRQFIQDYGMRYYYQVYSILETVATLDQQVVIHLISTLTQS 1200
            VKACQVGSEEEPSSQLTSVFRQFIQDYGMRYYYQVYSILETVATLDQQVVIHLISTLTQS
Sbjct: 1141 VKACQVGSEEEPSSQLTSVFRQFIQDYGMRYYYQVYSILETVATLDQQVVIHLISTLTQS 1200

Query: 1201 LKDSEQKWGLGRNIAQREAYSKLLSHLGQMGQDEMQRLENDNT 1243
            LKDSEQKWGLGRNIAQREAYSKLLSHLGQMGQDEMQRLENDNT
Sbjct: 1201 LKDSEQKWGLGRNIAQREAYSKLLSHLGQMGQDEMQRLENDNT 1243


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 40.0 bits (92), Expect = 0.014
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 622  TLLSIYIDGVQEVFETSYCLYPSHEKLLNDGFSMLLRACRESELRT-VLSFLQAVLARIR 680
            TLL +    V    E+   L+P HE+  +   S +LR C+  + +T +  FL++V A + 
Sbjct: 5416 TLLEVGQIAVCSFGESVKLLHPFHEQFSDYSGSQILRLCKFQQKKTKIAQFLESV-ANMF 5474

Query: 681  SMHQQLCQELQRDNVDLFVQSS------LSAKERHLAAVASA 716
            +  QQL Q +  +   L +  S      L  KER LAAV +A
Sbjct: 5475 AAAQQLSQNISSETAQLLLVVSDGRGLFLEGKERVLAAVQAA 5516


>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
          Length = 3080

 Score = 37.7 bits (86), Expect = 0.069
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 417  EPNIAIVTILWEYYSKNLNSSFSISWLPFKGLANTMKS-PLSMLEMVKTCCCDKQDQELY 475
            EP I I +++ E+   +LNS F  S      L   +KS  +S  EMV      +Q +   
Sbjct: 2258 EPRIPITSVINEFTENSLNSIFQNSEFSLATLETQIKSRDISEEEMVMDRAILEQREGQE 2317

Query: 476  KSSSSYTIFLCILAKVVKKAMKSNGPHPWKQVKGRIYSKF 515
             ++ SY  + C+   ++K +         +++K +I+  F
Sbjct: 2318 MATISYVPYSCVCQVIIKASSSLASSELMRKIKSKIHGNF 2357


>gi|169167993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 826 IKNLSGPDDLLIDKNLEEAVEKEYMKQLVKLTRLLFNLSEVKSI-FSKAQVEYLS----I 880
           I+NLS    L++  N+   + + + +QLV  T L+F+ ++   +  +K  V++L      
Sbjct: 204 IQNLSSLSVLMV--NISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMVQFLRNFRYH 261

Query: 881 SEDPKKALVRFFEAVGVTYGNVQTLSDKSAMVTKSLEYLGE 921
            +   ++ V+FF A+G   G  +    KS M+  S E   E
Sbjct: 262 YQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELTNE 302


>gi|169167430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 826 IKNLSGPDDLLIDKNLEEAVEKEYMKQLVKLTRLLFNLSEVKSI-FSKAQVEYLS----I 880
           I+NLS    L++  N+   + + + +QLV  T L+F+ ++   +  +K  V++L      
Sbjct: 204 IQNLSSLSVLMV--NISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMVQFLRNFRYH 261

Query: 881 SEDPKKALVRFFEAVGVTYGNVQTLSDKSAMVTKSLEYLGE 921
            +   ++ V+FF A+G   G  +    KS M+  S E   E
Sbjct: 262 YQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELTNE 302


>gi|45827701 pad-1-like [Homo sapiens]
          Length = 2298

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 1073 IRKSYLEYKGSSPPPRLASILAFILQLFKETNTDIY-EVEL-LLPGILKCLVLVSEPQVK 1130
            +++ Y      SPPP ++ + A ++ L      ++Y EV+   LP +L CLV      ++
Sbjct: 459  VKQRYSVRNSVSPPPTVSELCALLVFLLDVIPLELYSEVQTQYLPQVLGCLVQPLAEDME 518

Query: 1131 RLATENLQYMVKAC 1144
             L+   L + +K C
Sbjct: 519  ALSLPELTHALKTC 532


>gi|210031154 zinc finger protein 541 [Homo sapiens]
          Length = 1365

 Score = 32.7 bits (73), Expect = 2.2
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)

Query: 969  IIDCLLLPHAVLQQEKELPAPMLSAIQKSLPLYLQGMCIVCCQSQNPNAYLNQLLGNVIE 1028
            ++DCLL    + Q     P PMLS I++   +Y   +C     S +  A  +QL+ ++++
Sbjct: 999  LVDCLL--KGLFQCSPYTPPPMLSPIREGSGVYFNTLC-----STSTQASPDQLISSMLD 1051

Query: 1029 QYIGRF 1034
            Q  G F
Sbjct: 1052 QVDGSF 1057


>gi|50845407 chromosome 22 open reading frame 13 [Homo sapiens]
          Length = 240

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 754 PSTAPSDFQPQPVISIIQLFGWD-DIICPQVVARYLSHV 791
           P   P DF   PV  I QL+ WD  + C ++V RYL  +
Sbjct: 10  PPLEPGDFVQLPVPVIQQLYHWDCGLACSRMVLRYLGQL 48


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,775,287
Number of Sequences: 37866
Number of extensions: 1837772
Number of successful extensions: 4305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4290
Number of HSP's gapped (non-prelim): 15
length of query: 1243
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1129
effective length of database: 13,930,794
effective search space: 15727866426
effective search space used: 15727866426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.