Search of human proteins with 22749409

Search of human proteins with 22749409

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22749409 hypothetical protein LOC219557 [Homo sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22749409 hypothetical protein LOC219557 [Homo sapiens]             510   e-145
gi|18765694 dipeptidylpeptidase IV [Homo sapiens]                      31   1.2  
gi|34577118 dopey family member 1 [Homo sapiens]                       31   1.2  
gi|150417989 cyclin K isoform 1 [Homo sapiens]                         30   2.6  
gi|38176158 cyclin K isoform 2 [Homo sapiens]                          30   2.6  
gi|53832014 choroideremia-like Rab escort protein 2 [Homo sapiens]     29   4.5  
gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens]            28   7.7  

>gi|22749409 hypothetical protein LOC219557 [Homo sapiens]
          Length = 253

 Score =  510 bits (1313), Expect = e-145
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MSFSVHNQKGSKRPLPLEPLLFLQVPRSNYLHFQEEKQRLHLKKFLLDRMFLVAKIQANV 60
           MSFSVHNQKGSKRPLPLEPLLFLQVPRSNYLHFQEEKQRLHLKKFLLDRMFLVAKIQANV
Sbjct: 1   MSFSVHNQKGSKRPLPLEPLLFLQVPRSNYLHFQEEKQRLHLKKFLLDRMFLVAKIQANV 60

Query: 61  ERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHILESSSDTLYKVLLDYIGHVKD 120
           ERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHILESSSDTLYKVLLDYIGHVKD
Sbjct: 61  ERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHILESSSDTLYKVLLDYIGHVKD 120

Query: 121 ETVFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYLDDVTQSQSLKEVITDFLTQTHK 180
           ETVFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYLDDVTQSQSLKEVITDFLTQTHK
Sbjct: 121 ETVFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYLDDVTQSQSLKEVITDFLTQTHK 180

Query: 181 LSLYLCQTMKVGTKGPGDNLHQVAPDLLLPEQIIKYLCKSEEFMDPATFINMYNRPIHIT 240
           LSLYLCQTMKVGTKGPGDNLHQVAPDLLLPEQIIKYLCKSEEFMDPATFINMYNRPIHIT
Sbjct: 181 LSLYLCQTMKVGTKGPGDNLHQVAPDLLLPEQIIKYLCKSEEFMDPATFINMYNRPIHIT 240

Query: 241 LDSEVVWPAPSRF 253
           LDSEVVWPAPSRF
Sbjct: 241 LDSEVVWPAPSRF 253


>gi|18765694 dipeptidylpeptidase IV [Homo sapiens]
          Length = 766

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 148 VSVIKVPVMYL----DDVTQSQSLKEVITDFLTQTHKLSLY 184
           V++I VPV+ L    DD T        +TD+L  T++L LY
Sbjct: 18  VTIITVPVVLLNKGTDDATADSRKTYTLTDYLKNTYRLKLY 58


>gi|34577118 dopey family member 1 [Homo sapiens]
          Length = 2465

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 64   DVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHILESSSDTLYKVL 111
            D    Y Q+  SV + HL EA +G+L     SILH++ SS   L+ +L
Sbjct: 1737 DPTTQYHQLLVSVDQKHLFEARSGIL-----SILHMIMSSVTLLWSIL 1779


>gi|150417989 cyclin K isoform 1 [Homo sapiens]
          Length = 580

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 50  MFLVAKIQANVER-KDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHIL--ESSSDT 106
           +FL  K++   ++ KD+      +   V     G+     +++    +L  +  +   + 
Sbjct: 100 LFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEH 159

Query: 107 LYKVLLDYIGHVKDET--VFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYL 158
            Y+ LL Y   +K +   +  + QM    ++ ++   L +QW   +I V VMYL
Sbjct: 160 PYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYL 213


>gi|38176158 cyclin K isoform 2 [Homo sapiens]
          Length = 354

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 50  MFLVAKIQANVER-KDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHIL--ESSSDT 106
           +FL  K++   ++ KD+      +   V     G+     +++    +L  +  +   + 
Sbjct: 100 LFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEH 159

Query: 107 LYKVLLDYIGHVKDET--VFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYL 158
            Y+ LL Y   +K +   +  + QM    ++ ++   L +QW   +I V VMYL
Sbjct: 160 PYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYL 213


>gi|53832014 choroideremia-like Rab escort protein 2 [Homo sapiens]
          Length = 656

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 38  QRLHLKKFLLDRMFLVAKIQANVERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTS-- 95
           QR++ K F+++  +L  +  +NV+ K ++       QS+LK  L +  T +L++ P    
Sbjct: 427 QRINAKYFIVEDSYLSEETCSNVQYKQISRAVLITDQSILKTDLDQQ-TSILIVPPAEPG 485

Query: 96  --ILHILESSSDTLYKVLLDYIGHV 118
              + + E  S T+  +   Y+ H+
Sbjct: 486 ACAVRVTELCSSTMTCMKDTYLVHL 510


>gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens]
          Length = 870

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 32  HFQEEKQRLHLKKFLLDRMFLVAKIQANVERKDVADYYEQMFQSVLKHHLGEAVTGLLLI 91
           H +EE   L  K F ++     +    ++E +DV  + ++  Q     +L E  TG  L+
Sbjct: 723 HSKEECSSLPSKSFNIEHCHQNSSSTVSLENEDVGSFRQEYRQP----YLCEVKTGQALV 778

Query: 92  YPTSILHILESSSD-TLYKVLLD 113
            P  + ++ + +SD TL+ V +D
Sbjct: 779 CP--VCNVEQKTSDLTLFNVHVD 799


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,244,888
Number of Sequences: 37866
Number of extensions: 378199
Number of successful extensions: 1062
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 8
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.