Search of human proteins with 226529917

Search of human proteins with 226529917

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo
sapiens]
         (286 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens]     576   e-165
gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens]       502   e-142
gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo ...    31   1.1  
gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo ...    31   1.1  
gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo sapi...    28   7.1  
gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo ...    28   9.2  
gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo ...    28   9.2  
gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo ...    28   9.2  
gi|148612863 transient receptor potential cation channel, subfam...    28   9.2  
gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo ...    28   9.2  
gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo s...    28   9.2  

>gi|226529917 triosephosphate isomerase 1 isoform 2 [Homo sapiens]
          Length = 286

 Score =  576 bits (1485), Expect = e-165
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 1   MAEDGEEAEFHFAALYISGQWPRLRADTDLQRLGSSAMAPSRKFFVGGNWKMNGRKQSLG 60
           MAEDGEEAEFHFAALYISGQWPRLRADTDLQRLGSSAMAPSRKFFVGGNWKMNGRKQSLG
Sbjct: 1   MAEDGEEAEFHFAALYISGQWPRLRADTDLQRLGSSAMAPSRKFFVGGNWKMNGRKQSLG 60

Query: 61  ELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGM 120
           ELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGM
Sbjct: 61  ELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGM 120

Query: 121 IKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKV 180
           IKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKV
Sbjct: 121 IKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKV 180

Query: 181 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQ 240
           VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQ
Sbjct: 181 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQ 240

Query: 241 STRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 286
           STRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ
Sbjct: 241 STRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 286


>gi|4507645 triosephosphate isomerase 1 isoform 1 [Homo sapiens]
          Length = 249

 Score =  502 bits (1293), Expect = e-142
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 38  MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKI 97
           MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKI
Sbjct: 1   MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKI 60

Query: 98  AVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAE 157
           AVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAE
Sbjct: 61  AVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAE 120

Query: 158 GLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQ 217
           GLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQ
Sbjct: 121 GLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQ 180

Query: 218 QAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE 277
           QAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE
Sbjct: 181 QAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE 240

Query: 278 FVDIINAKQ 286
           FVDIINAKQ
Sbjct: 241 FVDIINAKQ 249


>gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
           sapiens]
          Length = 413

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 205 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 264
           VWA    +       +  H++   W+KS     +    R  +GGSV+  TC + +S+  V
Sbjct: 4   VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63

Query: 265 DG 266
            G
Sbjct: 64  RG 65


>gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo
           sapiens]
          Length = 413

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 205 VWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDV 264
           VWA    +       +  H++   W+KS     +    R  +GGSV+  TC + +S+  V
Sbjct: 4   VWARAGQERGRAFWLKGPHKEANEWVKSVAVCLLGVVVRASHGGSVSSGTCSQRSSEEKV 63

Query: 265 DG 266
            G
Sbjct: 64  RG 65


>gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo
           sapiens]
          Length = 1029

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 24/83 (28%)

Query: 38  MAPSRKFFVGGNWKM--NGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDP 95
           M P +   + G  KM  N ++  LG+L+      +VPAD  +                  
Sbjct: 172 MVPQQALVIRGGEKMQINVQEVVLGDLVEIKGGDRVPADLRL------------------ 213

Query: 96  KIAVAAQNCYKVTNGAFTGEISP 118
              ++AQ C KV N + TGE  P
Sbjct: 214 ---ISAQGC-KVDNSSLTGESEP 232


>gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo
           sapiens]
          Length = 537

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 133 HSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 168
           H    HV G  DE +   + H LA GLGV   +G++
Sbjct: 203 HGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQ 238


>gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo
           sapiens]
          Length = 537

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 133 HSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 168
           H    HV G  DE +   + H LA GLGV   +G++
Sbjct: 203 HGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQ 238


>gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo
           sapiens]
          Length = 537

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 133 HSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 168
           H    HV G  DE +   + H LA GLGV   +G++
Sbjct: 203 HGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQ 238


>gi|148612863 transient receptor potential cation channel, subfamily
           M, member 7 [Homo sapiens]
          Length = 1865

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 191 NVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKS--NVSDAVA 239
           +V++W  +V+AY   +AI   +     +A +V++K++ W     N+SD +A
Sbjct: 883 SVQEW--IVIAYIFTYAIEKVREIFMSEAGKVNQKIKVWFSDYFNISDTIA 931


>gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo
           sapiens]
          Length = 477

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 222 VHEKLRG-WLKSNVSDAVAQSTRIIYGGSVTGATCKELASQP 262
           V+E L+  WL +   D+V     ++ G     +TC +LAS P
Sbjct: 364 VYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYP 405


>gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo
           sapiens]
          Length = 458

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 222 VHEKLRG-WLKSNVSDAVAQSTRIIYGGSVTGATCKELASQP 262
           V+E L+  WL +   D+V     ++ G     +TC +LAS P
Sbjct: 345 VYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYP 386


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,697,728
Number of Sequences: 37866
Number of extensions: 445558
Number of successful extensions: 753
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 746
Number of HSP's gapped (non-prelim): 11
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.