BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|11545787 egl nine homolog 3 [Homo sapiens] (239 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|11545787 egl nine homolog 3 [Homo sapiens] 503 e-143 gi|13489073 egl nine homolog 1 [Homo sapiens] 311 2e-85 gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 299 2e-81 gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 299 2e-81 gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] 33 0.22 gi|186928835 leprecan 1 isoform 1 [Homo sapiens] 30 1.4 gi|226371643 leprecan 1 isoform 2 [Homo sapiens] 30 1.4 gi|197313662 leprecan-like 1 isoform b [Homo sapiens] 28 5.4 gi|27764882 leprecan-like 1 isoform a [Homo sapiens] 28 5.4 gi|154091007 hypothetical protein LOC136288 [Homo sapiens] 28 5.4 gi|28466983 leprecan-like 2 [Homo sapiens] 28 5.4 gi|94536836 2-oxoglutarate and iron-dependent oxygenase domain c... 28 7.0 >gi|11545787 egl nine homolog 3 [Homo sapiens] Length = 239 Score = 503 bits (1296), Expect = e-143 Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQ 60 MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQ Sbjct: 1 MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQ 60 Query: 61 LAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKA 120 LAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKA Sbjct: 61 LAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKA 120 Query: 121 MVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEP 180 MVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEP Sbjct: 121 MVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEP 180 Query: 181 IFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED 239 IFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED Sbjct: 181 IFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED 239 >gi|13489073 egl nine homolog 1 [Homo sapiens] Length = 426 Score = 311 bits (798), Expect = 2e-85 Identities = 144/224 (64%), Positives = 174/224 (77%), Gaps = 1/224 (0%) Query: 2 PLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQL 61 P G L K+ALEYIVPC+++ G C +D+FLG+ G + + V+ LH TG DGQL Sbjct: 181 PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQL 240 Query: 62 AGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKAM 121 ++ SK +RGD+ITWI G E GCE I L+S +D L+ +C +LG Y + R+KAM Sbjct: 241 VSQKSDSSK-DIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAM 299 Query: 122 VACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPI 181 VACYPGNGTGYVRHVDNPNGDGRC+TCIYYLNK+WDAK+ GGILRIFPEGK+ AD+EP Sbjct: 300 VACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPK 359 Query: 182 FDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKF 225 FDRLLFFWSDRRNPHEVQP+YATRYA+TVWYFDA+ERA AK K+ Sbjct: 360 FDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKY 403 >gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] Length = 407 Score = 299 bits (765), Expect = 2e-81 Identities = 133/215 (61%), Positives = 169/215 (78%), Gaps = 1/215 (0%) Query: 12 EKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQLAGPRAGVSKR 71 E++AL+YIVPC+ G C D+FLG +G VL V+ L G LRDGQL RA + R Sbjct: 175 ERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRA-IPPR 233 Query: 72 HLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKAMVACYPGNGTG 131 +RGDQI W+ G+E GC +I L++ +D ++ +C RLG Y + R+KAMVACYPGNG G Sbjct: 234 SIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLG 293 Query: 132 YVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSD 191 YVRHVDNP+GDGRCITCIYYLN+NWD K+HGG+L+IFPEG+ +A++EP+FDRLL FWSD Sbjct: 294 YVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSD 353 Query: 192 RRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFR 226 RRNPHEV+P+YATRYA+TVWYFDA+ERA AK K++ Sbjct: 354 RRNPHEVKPAYATRYAITVWYFDAKERAAAKDKYQ 388 >gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] Length = 407 Score = 299 bits (765), Expect = 2e-81 Identities = 133/215 (61%), Positives = 169/215 (78%), Gaps = 1/215 (0%) Query: 12 EKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQLAGPRAGVSKR 71 E++AL+YIVPC+ G C D+FLG +G VL V+ L G LRDGQL RA + R Sbjct: 175 ERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRA-IPPR 233 Query: 72 HLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKAMVACYPGNGTG 131 +RGDQI W+ G+E GC +I L++ +D ++ +C RLG Y + R+KAMVACYPGNG G Sbjct: 234 SIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKAMVACYPGNGLG 293 Query: 132 YVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSD 191 YVRHVDNP+GDGRCITCIYYLN+NWD K+HGG+L+IFPEG+ +A++EP+FDRLL FWSD Sbjct: 294 YVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSD 353 Query: 192 RRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFR 226 RRNPHEV+P+YATRYA+TVWYFDA+ERA AK K++ Sbjct: 354 RRNPHEVKPAYATRYAITVWYFDAKERAAAKDKYQ 388 >gi|13375891 hypothetical protein LOC79701 isoform 1 [Homo sapiens] Length = 319 Score = 33.1 bits (74), Expect = 0.22 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Query: 135 HVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRN 194 HVD T + YL+ N+ GG EG + VEP R+ FF S N Sbjct: 230 HVDKVTYGSFDYTSLLYLS-NYLEDFGGGRFMFMEEGAN--KTVEPRAGRVSFFTSGSEN 286 Query: 195 PHEVQP-SYATRYAMTV 210 H V+ + TRYA+T+ Sbjct: 287 LHRVEKVHWGTRYAITI 303 >gi|186928835 leprecan 1 isoform 1 [Homo sapiens] Length = 736 Score = 30.4 bits (67), Expect = 1.4 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202 R + I YLN ++D G + K+ A+V+P R + F S NPH V+ + Sbjct: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 Query: 203 ATRYAMTVWY 212 R A+ +W+ Sbjct: 667 GQRCAIALWF 676 >gi|226371643 leprecan 1 isoform 2 [Homo sapiens] Length = 697 Score = 30.4 bits (67), Expect = 1.4 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202 R + I YLN ++D G + K+ A+V+P R + F S NPH V+ + Sbjct: 610 RDYSAILYLNGDFDG---GNFYFTELDAKTVTAEVQPQCGRAVGFSSGTENPHGVKAVTR 666 Query: 203 ATRYAMTVWY 212 R A+ +W+ Sbjct: 667 GQRCAIALWF 676 >gi|197313662 leprecan-like 1 isoform b [Homo sapiens] Length = 527 Score = 28.5 bits (62), Expect = 5.4 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202 R + + Y+N +++ G + + K+ A ++P R++ F S NPH V+ + Sbjct: 422 RDYSALLYMNDDFEG---GEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTK 478 Query: 203 ATRYAMTVWY 212 R A+ +W+ Sbjct: 479 GKRCAVALWF 488 >gi|27764882 leprecan-like 1 isoform a [Homo sapiens] Length = 708 Score = 28.5 bits (62), Expect = 5.4 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 144 RCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP-SY 202 R + + Y+N +++ G + + K+ A ++P R++ F S NPH V+ + Sbjct: 603 RDYSALLYMNDDFEG---GEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTK 659 Query: 203 ATRYAMTVWY 212 R A+ +W+ Sbjct: 660 GKRCAVALWF 669 >gi|154091007 hypothetical protein LOC136288 [Homo sapiens] Length = 295 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 194 NPHEVQPSYATRYA------MTVWYFDAEERAEAKKKFR 226 NP + SYA+R TVW +AEE + KKK R Sbjct: 133 NPDQANGSYASRRGPFDFDMKTVWQREAEELEKEKKKLR 171 >gi|28466983 leprecan-like 2 [Homo sapiens] Length = 736 Score = 28.5 bits (62), Expect = 5.4 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 149 IYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEV-QPSYATRYA 207 + YLN ++ G + P + A V P RL+ F S NPH V + R A Sbjct: 612 LLYLNDDFQG---GDLFFTEPNALTVTARVRPRCGRLVAFSSGVENPHGVWAVTRGRRCA 668 Query: 208 MTVWYFDAEERAE 220 + +W+ A E E Sbjct: 669 LALWHTWAPEHRE 681 >gi|94536836 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Homo sapiens] Length = 542 Score = 28.1 bits (61), Expect = 7.0 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 142 DGRCITCIYYLNKNWDAKLHGGILRIFP-----EGKSFIADVEPIFDRLLFFWSDRRNPH 196 +GR I I YL WD + GG L ++ + K + + P +++L+FF + H Sbjct: 160 EGRRIAFILYLVPPWDRSM-GGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFH 218 Query: 197 ---EVQPSYATRYAMTVWY 212 EV +R +++ W+ Sbjct: 219 QVSEVLSEEKSRLSISGWF 237 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.142 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,565,059 Number of Sequences: 37866 Number of extensions: 440346 Number of successful extensions: 681 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 674 Number of HSP's gapped (non-prelim): 12 length of query: 239 length of database: 18,247,518 effective HSP length: 99 effective length of query: 140 effective length of database: 14,498,784 effective search space: 2029829760 effective search space used: 2029829760 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.