Search of human proteins with 224465228

Search of human proteins with 224465228

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224465228 arylformamidase isoform 2 [Homo sapiens]
         (308 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224465228 arylformamidase isoform 2 [Homo sapiens]                 629   e-180
gi|192807282 arylformamidase isoform 1 [Homo sapiens]                 613   e-176
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]             32   0.71 
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]             32   0.71 
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]             32   0.71 
gi|14165272 PTEN induced putative kinase 1 precursor [Homo sapiens]    30   2.1  
gi|206597554 arylacetamide deacetylase-like 2 [Homo sapiens]           29   4.6  

>gi|224465228 arylformamidase isoform 2 [Homo sapiens]
          Length = 308

 Score =  629 bits (1621), Expect = e-180
 Identities = 308/308 (100%), Positives = 308/308 (100%)

Query: 1   MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR 60
           MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR
Sbjct: 1   MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR 60

Query: 61  KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA 120
           KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA
Sbjct: 61  KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA 120

Query: 121 VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK 180
           VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK
Sbjct: 121 VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK 180

Query: 181 HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL 240
           HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL
Sbjct: 181 HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL 240

Query: 241 VVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ 300
           VVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ
Sbjct: 241 VVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ 300

Query: 301 IILKTIFQ 308
           IILKTIFQ
Sbjct: 301 IILKTIFQ 308


>gi|192807282 arylformamidase isoform 1 [Homo sapiens]
          Length = 303

 Score =  613 bits (1581), Expect = e-176
 Identities = 303/308 (98%), Positives = 303/308 (98%), Gaps = 5/308 (1%)

Query: 1   MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR 60
           MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR
Sbjct: 1   MMDVSGVGFPSKVPWKKMSAEELENQYCPSRWVVRLGAEEALRTYSQIGIEATTRARATR 60

Query: 61  KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA 120
           KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA
Sbjct: 61  KSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGVA 120

Query: 121 VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK 180
           VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK
Sbjct: 121 VVIVAYGIAPKGTLDHMVDQVTRSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLLADWTK 180

Query: 181 HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL 240
           HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL
Sbjct: 181 HGVTPNLRGFFLVSGVFDLEPIVYTSQNVALQLTLEDAQRNSPQLKVAQAQPVDPTCRVL 240

Query: 241 VVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ 300
           VVVGQFDSPEFHRQSWEFY     QTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ
Sbjct: 241 VVVGQFDSPEFHRQSWEFY-----QTLCQGEWKASFEELHDVDHFEIVENLTQKDNVLTQ 295

Query: 301 IILKTIFQ 308
           IILKTIFQ
Sbjct: 296 IILKTIFQ 303


>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
          Length = 843

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 238 RVLVVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDH 284
           R+ + V ++  P  H +  +FYQ+ P +      WK SF++L+   H
Sbjct: 114 RLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLYKGAH 160


>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
          Length = 686

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 238 RVLVVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDH 284
           R+ + V ++  P  H +  +FYQ+ P +      WK SF++L+   H
Sbjct: 114 RLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLYKGAH 160


>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
          Length = 585

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 238 RVLVVVGQFDSPEFHRQSWEFYQVLPVQTLCQGEWKASFEELHDVDH 284
           R+ + V ++  P  H +  +FYQ+ P +      WK SF++L+   H
Sbjct: 114 RLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLYKGAH 160


>gi|14165272 PTEN induced putative kinase 1 precursor [Homo sapiens]
          Length = 581

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 143 RSVAFVQKRYPSNKGIYLCGHSAGAHLAAMMLL 175
           R++  V K YP     YLC ++    LAAMMLL
Sbjct: 312 RTLFLVMKNYPCTLRQYLCVNTPSPRLAAMMLL 344


>gi|206597554 arylacetamide deacetylase-like 2 [Homo sapiens]
          Length = 401

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 10/105 (9%)

Query: 76  VDIYFPDESSEALP-FFLFFHGGYWQSGSKDESAF-MVHPLTAQGVAVVIVA--YGIAPK 131
           V +Y P   SE      ++FHGG +  GS  + AF  ++  TA  +  V+V   Y +AP+
Sbjct: 91  VRLYLPKRKSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQ 150

Query: 132 GTLDHMVDQVTRSVAF------VQKRYPSNKGIYLCGHSAGAHLA 170
                  +    +V F      + K       I + G S+G +LA
Sbjct: 151 HHFPAQFEDGLAAVKFFLLEKILTKYGVDPTRICIAGDSSGGNLA 195


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,416,689
Number of Sequences: 37866
Number of extensions: 481703
Number of successful extensions: 1082
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1075
Number of HSP's gapped (non-prelim): 7
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.