Search of human proteins with 22296884

Search of human proteins with 22296884

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22296884 transmembrane protein 185A [Homo sapiens]
         (350 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22296884 transmembrane protein 185A [Homo sapiens]                 728   0.0  
gi|14269580 transmembrane protein 60 [Homo sapiens]                    44   3e-04
gi|16596686 transmembrane protein 203 [Homo sapiens]                   42   8e-04
gi|4507047 solute carrier family 7 (cationic amino acid transpor...    32   1.1  
gi|218749848 family with sequence similarity 38, member A [Homo ...    31   1.4  
gi|46243671 G protein-coupled receptor 152 [Homo sapiens]              30   2.5  
gi|9506745 urotensin 2 receptor [Homo sapiens]                         30   3.2  
gi|5032033 RNA binding motif protein 6 [Homo sapiens]                  30   3.2  
gi|18034692 CDW92 antigen [Homo sapiens]                               30   3.2  
gi|50726996 choline phosphotransferase 1 [Homo sapiens]                30   4.2  
gi|7330339 olfactory receptor, family 10, subfamily H, member 3 ...    29   5.5  
gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens]              29   7.2  
gi|94721340 SID1 transmembrane family, member 2 [Homo sapiens]         29   7.2  

>gi|22296884 transmembrane protein 185A [Homo sapiens]
          Length = 350

 Score =  728 bits (1879), Expect = 0.0
 Identities = 350/350 (100%), Positives = 350/350 (100%)

Query: 1   MNLRGLFQDFNPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASV 60
           MNLRGLFQDFNPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASV
Sbjct: 1   MNLRGLFQDFNPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASV 60

Query: 61  GTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLF 120
           GTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLF
Sbjct: 61  GTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLF 120

Query: 121 FVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALRLDKIIHWPWLVVCVPLWILMS 180
           FVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALRLDKIIHWPWLVVCVPLWILMS
Sbjct: 121 FVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALRLDKIIHWPWLVVCVPLWILMS 180

Query: 181 FLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFEILLVHKLDGHNA 240
           FLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFEILLVHKLDGHNA
Sbjct: 181 FLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFEILLVHKLDGHNA 240

Query: 241 FSCIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRKDFCQFLLEIFPFLREYGNISYDLH 300
           FSCIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRKDFCQFLLEIFPFLREYGNISYDLH
Sbjct: 241 FSCIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRKDFCQFLLEIFPFLREYGNISYDLH 300

Query: 301 HEDNEETEETPVPEPPKIAPMFRKKARVVITQSPGKYVLPPPKLNIEMPD 350
           HEDNEETEETPVPEPPKIAPMFRKKARVVITQSPGKYVLPPPKLNIEMPD
Sbjct: 301 HEDNEETEETPVPEPPKIAPMFRKKARVVITQSPGKYVLPPPKLNIEMPD 350


>gi|14269580 transmembrane protein 60 [Homo sapiens]
          Length = 133

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 150 ILQFIFIALRLDKIIHWPWLVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRT 209
           +L  I + L+LD+   W W ++ +P+WI  + L ++++  +       R       +  +
Sbjct: 17  LLFLIMLVLKLDEKAPWNWFLIFIPVWIFDTILLVLLIVKMAG-----RCKSGFDPRHGS 71

Query: 210 HITMALSWMTIVVPL-LTFEILLVHKLDGHNAFSCIPIFVPLWLSL 254
           H     +W  I + L L F + L  KL+     +   +F+PLW  L
Sbjct: 72  HNIKKKAWYLIAMLLKLAFCLALCAKLEQFTTMNLSYVFIPLWALL 117



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 5/107 (4%)

Query: 16  LIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASVGTGVWARNPQYRAEG 75
           L +   LLF ++L L+LD    W+++ +F P+W++  +++V   V      ++      G
Sbjct: 11  LTWLFTLLFLIMLVLKLDEKAPWNWFLIFIPVWIFDTILLVLLIVKMAGRCKSGFDPRHG 70

Query: 76  ETCVEFKA-MLIAVGIHLLLLMFEVLVCDRIERGSHFWL-LVFMPLF 120
              ++ KA  LIA+   LL L F + +C ++E+ +   L  VF+PL+
Sbjct: 71  SHNIKKKAWYLIAM---LLKLAFCLALCAKLEQFTTMNLSYVFIPLW 114


>gi|16596686 transmembrane protein 203 [Homo sapiens]
          Length = 136

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 18/130 (13%)

Query: 2   NLRGLFQDFNPSKFLIYA---CLLLFSVLLALRLDGIIQ-WSYWAVFAPIWLWKLMVIVG 57
           +LR L Q    + F I+     LL+FSVLLALR+DG++   S+W VF P +         
Sbjct: 4   SLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFF--------- 54

Query: 58  ASVGTGVWAR---NPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRI-ERGSHFWL 113
           A+ G   +     + +   +GE  +    +   + +  L  +FE+L+C ++ E+    W 
Sbjct: 55  AADGLSTYFTTIVSVRLFQDGEKRLAVLRLFWVLTVLSLKFVFEMLLCQKLAEQTRELWF 114

Query: 114 -LVFMPLFFV 122
            L+  PLF +
Sbjct: 115 GLITSPLFIL 124


>gi|4507047 solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 1 [Homo sapiens]
          Length = 629

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 10/112 (8%)

Query: 11  NPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASVGTGVWARNPQ 70
           N S  LI   ++ F ++  L  + + + + WAVF       L  +V     TGV  R P 
Sbjct: 497 NISTSLIAVLIITFCIVTVLGREALTKGALWAVFLLAGSALLCAVV-----TGVIWRQP- 550

Query: 71  YRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLFFV 122
              E +T + FK   + V + +L +   V +  ++++G+     V+M + F+
Sbjct: 551 ---ESKTKLSFKVPFLPV-LPILSIFVNVYLMMQLDQGTWVRFAVWMLIGFI 598


>gi|218749848 family with sequence similarity 38, member A [Homo
           sapiens]
          Length = 2090

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 168 WLVVCVPLWILMSFLCLVVLYYIVWSVLFL 197
           W+ VC  ++I++SF   +V+Y IV+  LFL
Sbjct: 149 WIYVCAGMFIVVSFAGRLVVYKIVYMFLFL 178


>gi|46243671 G protein-coupled receptor 152 [Homo sapiens]
          Length = 470

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 41/162 (25%)

Query: 47  IWLWKLMVIVGASVGTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLM--FEVLVCDR 104
           ++L  L+++   + G   W    Q R    T +    + +A+   L L    F++L    
Sbjct: 34  VFLVALLLLGLPANGLMAWLAGSQARHGAGTRLALLLLSLALSDFLFLAAAAFQIL---E 90

Query: 105 IERGSHFWLLVFMPLFFVSPVSVAAC-----VWGFRHDRSLELEILCSVNILQFIFIALR 159
           I  G H+            P+  AAC     +WG  +   L            F+  AL 
Sbjct: 91  IRHGGHW------------PLGTAACRFYYFLWGVSYSSGL------------FLLAALS 126

Query: 160 LDKII-----HW--PWLVVCVPLWILMSFLCLVVLYYIVWSV 194
           LD+ +     HW      V +PLW+      L  L+ + W V
Sbjct: 127 LDRCLLALCPHWYPGHRPVRLPLWVCAGVWVLATLFSVPWLV 168


>gi|9506745 urotensin 2 receptor [Homo sapiens]
          Length = 389

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 29  ALRLDGIIQWSYWAVFAPIWLWKLM 53
           ALRL   I   +WA F P WLW+L+
Sbjct: 256 ALRLVLGIVLLFWACFLPFWLWQLL 280


>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
          Length = 1123

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 289 LREYGNISYDLHHEDNEETEETPVPEPPKIAPMFRKK 325
           L EYG    D  +E+ EE E+TP P+P    P  R++
Sbjct: 905 LGEYGG---DSDYEEEEEEEQTPPPQPRTAQPQKREE 938


>gi|18034692 CDW92 antigen [Homo sapiens]
          Length = 657

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 21  LLLFSVLLALRLDGIIQWSYWAVFAPIWLWKLMVIVGASVGTGV--WARNPQYRAEGETC 78
           L L S++L++ L  II++    +   +W+  ++VI+G+  GTGV  W    Q R+  ET 
Sbjct: 218 LCLLSLVLSMILMVIIRYISRVL---VWILTILVILGSLGGTGVLWWLYAKQRRSPKETV 274

Query: 79  VEFKAMLIAVGIHLLLL 95
              +  +    +  LL+
Sbjct: 275 TPEQLQIAEDNLRALLI 291


>gi|50726996 choline phosphotransferase 1 [Homo sapiens]
          Length = 406

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 164 IHWPWLVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVP 223
           ++W WL+  +PLW+  + + L+ L   V + L L S    A +   +      W  ++  
Sbjct: 48  LYWTWLLQWIPLWMAPNSITLLGLAVNVVTTLVLISYCPTATEEAPY------WTYLLCA 101

Query: 224 LLTFEILLVHKLDGHNA---FSCIPI 246
           L  F    +  +DG  A    SC P+
Sbjct: 102 LGLFIYQSLDAIDGKQARRTNSCSPL 127


>gi|7330339 olfactory receptor, family 10, subfamily H, member 3
           [Homo sapiens]
          Length = 316

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 169 LVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFE 228
           ++VCV   I   FL ++   +IV ++L + S    AE R    +  +S +T+VV   +F 
Sbjct: 202 MLVCVTALIGCLFLIILSFVFIVAAILRIPS----AEGRHKTFSTCVSHLTVVVMHYSFA 257

Query: 229 ILLVHKLDG-HNAFS 242
            L+  K  G H+ +S
Sbjct: 258 SLIYLKPKGLHSMYS 272


>gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens]
          Length = 364

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 11/17 (64%), Positives = 13/17 (76%)

Query: 302 EDNEETEETPVPEPPKI 318
           E+ EE EE P PEPPK+
Sbjct: 68  EEEEEEEEEPPPEPPKL 84


>gi|94721340 SID1 transmembrane family, member 2 [Homo sapiens]
          Length = 832

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 80  EFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLFFVSPVSVAACVWGF 134
           +F + L+A+GI  LLL F   +  ++  G    L+   PL  +   SV   VWGF
Sbjct: 713 DFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLI---PLLCIVCTSV---VWGF 761


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.145    0.492 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,961,366
Number of Sequences: 37866
Number of extensions: 624435
Number of successful extensions: 2256
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2239
Number of HSP's gapped (non-prelim): 18
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.