Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 221316588

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|221316588 biphenyl hydrolase-like [Homo sapiens]
         (291 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|221316588 biphenyl hydrolase-like [Homo sapiens]                   603   e-173
gi|218777837 abhydrolase domain containing 7 [Homo sapiens]            49   7e-06
gi|218777840 abhydrolase domain containing 9 [Homo sapiens]            46   4e-05
gi|13376164 abhydrolase domain containing 9 [Homo sapiens]             46   4e-05
gi|145611434 abhydrolase domain containing 8 [Homo sapiens]            40   0.002
gi|31542303 abhydrolase domain containing 5 [Homo sapiens]             40   0.002
gi|158634482 poly (ADP-ribose) polymerase family, member 3 isofo...    35   0.059
gi|158634478 poly (ADP-ribose) polymerase family, member 3 isofo...    35   0.059
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap...    35   0.078
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap...    35   0.078
gi|18777795 serine hydrolase-like 2 [Homo sapiens]                     34   0.17 
gi|8923001 abhydrolase domain containing 10 [Homo sapiens]             34   0.17 
gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens]              33   0.29 
gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens]               33   0.29 
gi|109689718 abhydrolase domain containing 12 isoform a [Homo sa...    33   0.29 
gi|24308097 abhydrolase domain containing 12 isoform b [Homo sap...    33   0.29 
gi|226443152 abhydrolase domain containing 14B [Homo sapiens]          32   0.86 
gi|14249382 abhydrolase domain containing 14B [Homo sapiens]           32   0.86 
gi|223941839 abhydrolase domain containing 11 isoform 8 [Homo sa...    30   3.3  
gi|28629871 hypothetical protein LOC140701 [Homo sapiens]              29   4.3  
gi|148839342 ATP-grasp domain containing 1 [Homo sapiens]              29   5.6  
gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens]       29   5.6  
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol...    28   9.5  
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...    28   9.5  

>gi|221316588 biphenyl hydrolase-like [Homo sapiens]
          Length = 291

 Score =  603 bits (1555), Expect = e-173
 Identities = 291/291 (100%), Positives = 291/291 (100%)

Query: 1   MVAVLGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVAVNGVQLHYQQTGEGD 60
           MVAVLGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVAVNGVQLHYQQTGEGD
Sbjct: 1   MVAVLGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVAVNGVQLHYQQTGEGD 60

Query: 61  HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKD 120
           HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKD
Sbjct: 61  HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKD 120

Query: 121 AVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIR 180
           AVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIR
Sbjct: 121 AVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIR 180

Query: 181 DVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVH 240
           DVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVH
Sbjct: 181 DVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVH 240

Query: 241 GEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 291
           GEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ
Sbjct: 241 GEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 291


>gi|218777837 abhydrolase domain containing 7 [Homo sapiens]
          Length = 362

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 43  KVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHS 102
           ++  +G++ HY   GE    ++LL          +  QL+   K  + VVA D RGYG +
Sbjct: 75  RIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREF-KSEYRVVALDLRGYGET 133

Query: 103 RPP--DRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMV 160
             P   +++  D    D KD +D   +L + K  L+G   GG+ A + A  YP  + K++
Sbjct: 134 DAPIHRQNYKLDCLITDIKDILD---SLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLI 190

Query: 161 I 161
           +
Sbjct: 191 V 191


>gi|218777840 abhydrolase domain containing 9 [Homo sapiens]
          Length = 360

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 2/115 (1%)

Query: 47  NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD 106
           +G++LHY   G G+  ++L           +  QL+    + F VVA D RGYG S  P 
Sbjct: 83  SGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAP- 140

Query: 107 RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVI 161
           RD      +    D  D++  L + K  L+    G + A   +  YPS + +MV+
Sbjct: 141 RDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVV 195


>gi|13376164 abhydrolase domain containing 9 [Homo sapiens]
          Length = 360

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 2/115 (1%)

Query: 47  NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD 106
           +G++LHY   G G+  ++L           +  QL+    + F VVA D RGYG S  P 
Sbjct: 83  SGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAP- 140

Query: 107 RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVI 161
           RD      +    D  D++  L + K  L+    G + A   +  YPS + +MV+
Sbjct: 141 RDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVV 195


>gi|145611434 abhydrolase domain containing 8 [Homo sapiens]
          Length = 439

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 26/221 (11%)

Query: 89  FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIA 148
           + VVA D  G+G S  P       F+   A+D   + K    K+  L+G S G       
Sbjct: 203 YEVVAPDLAGHGASSAPQVAAAYTFYAL-AEDMRAIFKRYAKKRNVLIGHSYGVSFCTFL 261

Query: 149 AAKYPSYIHKMVIWGANAYVTDEDSM---------IYEGIRDVSKWS----------ERT 189
           A +YP  +HK+++         E S          +   +     WS           + 
Sbjct: 262 AHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHCLSPCLAWSFLKAGFARQGAKE 321

Query: 190 RKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPR 249
           ++ L+    ++  +      + G    ++ P+G+   H    +  P L+VHG  D  VP 
Sbjct: 322 KQLLKEGNAFNVSSFVLRAMMSG----QYWPEGDEVYHA--ELTVPVLLVHGMHDKFVPV 375

Query: 250 FHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 290
                + + +  + L L+ EG H + L   +  N L  +FL
Sbjct: 376 EEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFL 416


>gi|31542303 abhydrolase domain containing 5 [Homo sapiens]
          Length = 349

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 68  GMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMK- 126
           G LG    +FG    N       V A+D  G+G S  P  D  A+  E    ++++  + 
Sbjct: 86  GGLGLWALNFGDLCTNR-----PVYAFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWRC 140

Query: 127 ALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVI---WG 163
           AL   K+ LLG + GG  A   + KYPS ++ +++   WG
Sbjct: 141 ALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWG 180


>gi|158634482 poly (ADP-ribose) polymerase family, member 3 isoform
           b [Homo sapiens]
          Length = 533

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 50  QLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDF 109
           +L  QQ   G  A+  L   L  G TD G  L+ L+   +TV+   P  +GHS+PP  + 
Sbjct: 220 KLSKQQIARGFEALEALEEAL-KGPTDGGQSLEELSSHFYTVI---PHNFGHSQPPPINS 275

Query: 110 P 110
           P
Sbjct: 276 P 276


>gi|158634478 poly (ADP-ribose) polymerase family, member 3 isoform
           a [Homo sapiens]
          Length = 540

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 50  QLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDF 109
           +L  QQ   G  A+  L   L  G TD G  L+ L+   +TV+   P  +GHS+PP  + 
Sbjct: 227 KLSKQQIARGFEALEALEEAL-KGPTDGGQSLEELSSHFYTVI---PHNFGHSQPPPINS 282

Query: 110 P 110
           P
Sbjct: 283 P 283


>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 35.0 bits (79), Expect = 0.078
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 62  AVLLLPGMLGSGETDFGPQLKNLNKKLFT-VVAWDPRGYGHS-RPPDRDFPADFFERDAK 119
           AV+ L G+ GS +T+F    K L ++    V+  D R +G S   PD  +     E  ++
Sbjct: 68  AVVFLHGLFGS-KTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSY-----EIMSQ 121

Query: 120 DAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMV 160
           D  DL+  L      ++G S GG TA++ A + P  + +++
Sbjct: 122 DLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLI 162


>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
           sapiens]
          Length = 308

 Score = 35.0 bits (79), Expect = 0.078
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 62  AVLLLPGMLGSGETDFGPQLKNLNKKLFT-VVAWDPRGYGHS-RPPDRDFPADFFERDAK 119
           AV+ L G+ GS +T+F    K L ++    V+  D R +G S   PD  +     E  ++
Sbjct: 61  AVVFLHGLFGS-KTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSY-----EIMSQ 114

Query: 120 DAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMV 160
           D  DL+  L      ++G S GG TA++ A + P  + +++
Sbjct: 115 DLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLI 155


>gi|18777795 serine hydrolase-like 2 [Homo sapiens]
          Length = 314

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 89  FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIA 148
           F  VA D  G+G S       P  + +    +   ++ ALK+ + S+LG S GG+   + 
Sbjct: 59  FYYVAMDFGGHGLSSHYSPGVPY-YLQTFVSEIRRVVAALKWNRFSILGHSFGGVVGGMF 117

Query: 149 AAKYPSYIHKMVIWGANAYVTDEDSM 174
              +P  + K+++     ++ + D M
Sbjct: 118 FCTFPEMVDKLILLDTPLFLLESDEM 143


>gi|8923001 abhydrolase domain containing 10 [Homo sapiens]
          Length = 306

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 22/204 (10%)

Query: 51  LHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKL-FTVVAWDPRGYGHSRPPDRDF 109
           L Y++       ++ +PG L          ++   K L    + +D  G G S   D + 
Sbjct: 66  LAYKKLKGKSPGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSS---DGNS 122

Query: 110 PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKM--VIWGANAY 167
                 +  KD + ++  L      L+G S GG   L AA   P  +  +  V   A+  
Sbjct: 123 EESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAADTL 182

Query: 168 VTDEDSMIYEGIRDVSK---WSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNI 224
           VT  + +  E  ++V     WS  ++   E +Y   Y           I++ +H    + 
Sbjct: 183 VTKFNQLPVELKKEVEMKGVWSMPSKYSEEGVYNVQY---------SFIKEAEH----HC 229

Query: 225 CRHLLPRVQCPALIVHGEKDPLVP 248
             H    V CP  ++HG KD +VP
Sbjct: 230 LLHSPIPVNCPIRLLHGMKDDIVP 253


>gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens]
          Length = 303

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 91  VVAWDPRGYGHSRPPDRDFPADF--FERDAKDAVDLM-KALKFKKVSLLGWSDGGITALI 147
           V A D  G+G S   +R   +DF  F RD    VD M K      V LLG S GG  A++
Sbjct: 72  VFAHDHVGHGQSEG-ERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAIL 130

Query: 148 AAAKYPSYIHKMVI 161
            AA+ P +   MV+
Sbjct: 131 TAAERPGHFAGMVL 144


>gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens]
          Length = 313

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 91  VVAWDPRGYGHSRPPDRDFPADF--FERDAKDAVDLM-KALKFKKVSLLGWSDGGITALI 147
           V A D  G+G S   +R   +DF  F RD    VD M K      V LLG S GG  A++
Sbjct: 82  VFAHDHVGHGQSEG-ERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAIL 140

Query: 148 AAAKYPSYIHKMVI 161
            AA+ P +   MV+
Sbjct: 141 TAAERPGHFAGMVL 154


>gi|109689718 abhydrolase domain containing 12 isoform a [Homo
           sapiens]
          Length = 398

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 46/213 (21%)

Query: 50  QLHYQQTGEGDHAVLL-LPGMLGSGETDFGPQL-KNLNKKLFTVVAWDPRGYGHS--RPP 105
           Q+ Y+      H ++L L G  G+   D   +L K L+   + VV +D RG+G S   P 
Sbjct: 157 QMWYEDALASSHPIILYLHGNAGTRGGDHRVELYKVLSSLGYHVVTFDYRGWGDSVGTPS 216

Query: 106 DRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGAN 165
           +R    D     A    D +KA             G     I      + +   ++    
Sbjct: 217 ERGMTYD-----ALHVFDWIKA-----------RSGDNPVYIWGHSLGTGVATNLVRRLC 260

Query: 166 AYVTDEDSMIYEG----IRDVSKWSERTRKPLEALY----GYDYFARTCEKWVDGIRQ-- 215
              T  D++I E     IR+ +K       P   +Y    G+D+F      ++D I    
Sbjct: 261 ERETPPDALILESPFTNIREEAK-----SHPFSVIYRYFPGFDWF------FLDPITSSG 309

Query: 216 FKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP 248
            K   D N+       + CP LI+H E DP+VP
Sbjct: 310 IKFANDENV-----KHISCPLLILHAEDDPVVP 337


>gi|24308097 abhydrolase domain containing 12 isoform b [Homo
           sapiens]
          Length = 404

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 46/213 (21%)

Query: 50  QLHYQQTGEGDHAVLL-LPGMLGSGETDFGPQL-KNLNKKLFTVVAWDPRGYGHS--RPP 105
           Q+ Y+      H ++L L G  G+   D   +L K L+   + VV +D RG+G S   P 
Sbjct: 157 QMWYEDALASSHPIILYLHGNAGTRGGDHRVELYKVLSSLGYHVVTFDYRGWGDSVGTPS 216

Query: 106 DRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGAN 165
           +R    D     A    D +KA             G     I      + +   ++    
Sbjct: 217 ERGMTYD-----ALHVFDWIKA-----------RSGDNPVYIWGHSLGTGVATNLVRRLC 260

Query: 166 AYVTDEDSMIYEG----IRDVSKWSERTRKPLEALY----GYDYFARTCEKWVDGIRQ-- 215
              T  D++I E     IR+ +K       P   +Y    G+D+F      ++D I    
Sbjct: 261 ERETPPDALILESPFTNIREEAK-----SHPFSVIYRYFPGFDWF------FLDPITSSG 309

Query: 216 FKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP 248
            K   D N+       + CP LI+H E DP+VP
Sbjct: 310 IKFANDENV-----KHISCPLLILHAEDDPVVP 337


>gi|226443152 abhydrolase domain containing 14B [Homo sapiens]
          Length = 210

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 232 VQCPALIVHGEKDPLVPRFHADFIH-KHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 290
           V+ PALIV+G++DP+       F H K +   R+ +M    H  +L   +E++    DFL
Sbjct: 150 VKTPALIVYGDQDPM---GQTSFEHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206

Query: 291 Q 291
           Q
Sbjct: 207 Q 207


>gi|14249382 abhydrolase domain containing 14B [Homo sapiens]
          Length = 210

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 232 VQCPALIVHGEKDPLVPRFHADFIH-KHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 290
           V+ PALIV+G++DP+       F H K +   R+ +M    H  +L   +E++    DFL
Sbjct: 150 VKTPALIVYGDQDPM---GQTSFEHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206

Query: 291 Q 291
           Q
Sbjct: 207 Q 207


>gi|223941839 abhydrolase domain containing 11 isoform 8 [Homo
           sapiens]
          Length = 258

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 62  AVLLLPGMLGSGETDFGPQLKNLNKKLFT-VVAWDPRGYGHS-RPPDRDFPADFFERDAK 119
           AV+ L G+ GS +T+F    K L ++    V+  D R +G S   PD  +     E  ++
Sbjct: 68  AVVFLHGLFGS-KTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSY-----EIMSQ 121

Query: 120 DAVDLMKALKFKKVSLLGWSDGGITALIAA 149
           D  DL+  L      ++G S GG TA++ A
Sbjct: 122 DLQDLLPQLGLVPCVVVGHSMGGKTAMLLA 151


>gi|28629871 hypothetical protein LOC140701 [Homo sapiens]
          Length = 469

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 89  FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVD--LMKALKFKKVSLL--GWSDGGIT 144
           ++V+ W+  G+G S       P    + +A D V    +  L F    L+  GWS GG T
Sbjct: 197 YSVLGWNHPGFGSST----GVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFT 252

Query: 145 ALIAAAKYP 153
           A  A   YP
Sbjct: 253 ATWATMTYP 261


>gi|148839342 ATP-grasp domain containing 1 [Homo sapiens]
          Length = 827

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query: 5   LGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVAVNGV 49
           L  RG+LRL LL  AL PG +       A  G S T A++ + G+
Sbjct: 762 LHDRGLLRLNLLEEALVPGEYEEPYCSVACAGPSPTEARLRLLGL 806


>gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens]
          Length = 1222

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 6   GGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVAVNGVQLHYQQ----TGEGDH 61
           G RG    R L    +  +  PRAG +AA    + S   A+ G   H Q     +G    
Sbjct: 153 GSRGS---RPLAKGSREEVKAPRAGGSAAEDLRLPSTSFALTGDSAHNQAMVHWSGHNSS 209

Query: 62  AVLLLPGM----LGS-------GETDFGPQLKNLNKKL 88
            +L+L  +    LGS         TD+G   + LN K+
Sbjct: 210 VILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKV 247


>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform b [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 30  GPAAAFGTSVTSAKVAVNGVQLHYQQ-----TGEGDHAVLLLPGMLGSGETDFG 78
           GPAAA  ++V +A  A +G   HY        G   H     PG  GS     G
Sbjct: 158 GPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAG 211


>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform a [Homo sapiens]
          Length = 403

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 30  GPAAAFGTSVTSAKVAVNGVQLHYQQ-----TGEGDHAVLLLPGMLGSGETDFG 78
           GPAAA  ++V +A  A +G   HY        G   H     PG  GS     G
Sbjct: 158 GPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAG 211


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.140    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,182,873
Number of Sequences: 37866
Number of extensions: 575065
Number of successful extensions: 1046
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1032
Number of HSP's gapped (non-prelim): 25
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press