Guide to the Human Genome
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Search of human proteins with 21464131

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21464131 kallikrein 8 isoform 4 [Homo sapiens]
         (32 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21464131 kallikrein 8 isoform 4 [Homo sapiens]                      75   9e-15
gi|6005844 kallikrein 8 isoform 1 preproprotein [Homo sapiens]         56   7e-09
gi|21464129 kallikrein 8 isoform 3 [Homo sapiens]                      55   1e-08
gi|21464127 kallikrein 8 isoform 2 [Homo sapiens]                      54   3e-08
gi|193083180 cytochrome P450 family 4 subfamily F polypeptide 11...    28   1.6  
gi|193083178 cytochrome P450 family 4 subfamily F polypeptide 11...    28   1.6  
gi|94536866 zymogen granule protein 16 homolog B [Homo sapiens]        27   3.5  
gi|119220562 cytochrome P450, family 4, subfamily F, polypeptide...    27   4.5  
gi|6005737 cytochrome P450, family 4, subfamily F, polypeptide 8...    27   4.5  
gi|13435391 cytochrome P450, family 4, subfamily F, polypeptide ...    26   7.7  

>gi|21464131 kallikrein 8 isoform 4 [Homo sapiens]
          Length = 32

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 1  MGRPRPRAAKTWMFLLLLGGAWAGRFWRPPGV 32
          MGRPRPRAAKTWMFLLLLGGAWAGRFWRPPGV
Sbjct: 1  MGRPRPRAAKTWMFLLLLGGAWAGRFWRPPGV 32


>gi|6005844 kallikrein 8 isoform 1 preproprotein [Homo sapiens]
          Length = 260

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 24/24 (100%), Positives = 24/24 (100%)

Query: 1  MGRPRPRAAKTWMFLLLLGGAWAG 24
          MGRPRPRAAKTWMFLLLLGGAWAG
Sbjct: 1  MGRPRPRAAKTWMFLLLLGGAWAG 24


>gi|21464129 kallikrein 8 isoform 3 [Homo sapiens]
          Length = 119

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 24/26 (92%), Positives = 24/26 (92%)

Query: 1  MGRPRPRAAKTWMFLLLLGGAWAGRF 26
          MGRPRPRAAKTWMFLLLLGGAWA  F
Sbjct: 1  MGRPRPRAAKTWMFLLLLGGAWAENF 26


>gi|21464127 kallikrein 8 isoform 2 [Homo sapiens]
          Length = 305

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 23/23 (100%), Positives = 23/23 (100%)

Query: 1  MGRPRPRAAKTWMFLLLLGGAWA 23
          MGRPRPRAAKTWMFLLLLGGAWA
Sbjct: 1  MGRPRPRAAKTWMFLLLLGGAWA 23


>gi|193083180 cytochrome P450 family 4 subfamily F polypeptide 11
          [Homo sapiens]
          Length = 524

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 6  PRAAKTWMFLLLLGGAW 22
          P AA  W+ LLL+GG+W
Sbjct: 13 PVAASPWLLLLLVGGSW 29


>gi|193083178 cytochrome P450 family 4 subfamily F polypeptide 11
          [Homo sapiens]
          Length = 524

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 6  PRAAKTWMFLLLLGGAW 22
          P AA  W+ LLL+GG+W
Sbjct: 13 PVAASPWLLLLLVGGSW 29


>gi|94536866 zymogen granule protein 16 homolog B [Homo sapiens]
          Length = 208

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 2  GRPRPRAAKTWMFLLLLGG-AWAGRFWRPPG 31
          G  RP A    + L LLGG  WAG+ + P G
Sbjct: 30 GMHRPEAMLLLLTLALLGGPTWAGKMYGPGG 60


>gi|119220562 cytochrome P450, family 4, subfamily F, polypeptide
          3 [Homo sapiens]
          Length = 520

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 6  PRAAKTWMFLLLLGGAW 22
          P AA  W+ LLL+G +W
Sbjct: 13 PMAASPWLLLLLVGASW 29


>gi|6005737 cytochrome P450, family 4, subfamily F, polypeptide 8
          [Homo sapiens]
          Length = 520

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 5  RPRAAKTWMFLLLLGGAW 22
          RP AA  W+ LL++G +W
Sbjct: 12 RPVAASPWLLLLVVGASW 29


>gi|13435391 cytochrome P450, family 4, subfamily F, polypeptide 2
          [Homo sapiens]
          Length = 520

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 6  PRAAKTWMFLLLLGGAW 22
          P AA  W+ LLL+G +W
Sbjct: 13 PVAASPWLLLLLVGASW 29


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.147    0.577 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,901,874
Number of Sequences: 37866
Number of extensions: 50215
Number of successful extensions: 136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 127
Number of HSP's gapped (non-prelim): 10
length of query: 32
length of database: 18,247,518
effective HSP length: 7
effective length of query: 25
effective length of database: 17,982,456
effective search space: 449561400
effective search space used: 449561400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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