Search of human proteins with 21389559

Search of human proteins with 21389559

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21389559 glycosyltransferase 1 domain containing 1 [Homo
sapiens]
         (266 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21389559 glycosyltransferase 1 domain containing 1 [Homo sapi...   522   e-148
gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]          43   2e-04
gi|11863130 phosphatidylinositol N-acetylglucosaminyltransferase...    33   0.34 
gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]       29   3.7  
gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]            29   4.9  
gi|21735548 centrosomal protein 2 [Homo sapiens]                       28   6.4  

>gi|21389559 glycosyltransferase 1 domain containing 1 [Homo
           sapiens]
          Length = 266

 Score =  522 bits (1345), Expect = e-148
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MRLLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAAL 60
           MRLLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAAL
Sbjct: 1   MRLLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAAL 60

Query: 61  ALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEM 120
           ALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEM
Sbjct: 61  ALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEM 120

Query: 121 AQAQWVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILE 180
           AQAQWVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILE
Sbjct: 121 AQAQWVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILE 180

Query: 181 AMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYV 240
           AMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYV
Sbjct: 181 AMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYV 240

Query: 241 RMYHSWQVERDTYQQLIRKLEGSTED 266
           RMYHSWQVERDTYQQLIRKLEGSTED
Sbjct: 241 RMYHSWQVERDTYQQLIRKLEGSTED 266


>gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]
          Length = 416

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 157 AVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFS-NPQEF 215
           +++ +C  V+ +  +E      LEAM ++ PV+A N  G    + H VTG L   +P  F
Sbjct: 310 SLLHSCTCVLYTPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGFLCEPDPVHF 369

Query: 216 VHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 260
               ++ + +P+L+  + + GR  V+   S +   +   + + KL
Sbjct: 370 SEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKL 414


>gi|11863130 phosphatidylinositol N-acetylglucosaminyltransferase
           subunit A isoform 1 [Homo sapiens]
          Length = 484

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 17/67 (25%), Positives = 35/67 (52%)

Query: 129 VFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPV 188
           +   EV+ + +    VRL+G +  +D+  V+      +N+S++E    AI+EA    + V
Sbjct: 269 IILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQV 328

Query: 189 LARNIPG 195
           ++  + G
Sbjct: 329 VSTRVGG 335


>gi|122939159 peptidyl arginine deiminase, type II [Homo sapiens]
          Length = 665

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 32  VCVLKDAFDFESRSEIANLILAENCEAALAL-HLYRGGRLLQGHRIPFGVI 81
           VC +KD + F    E+ NL+   NCE  +   +L RG R +Q   I FG I
Sbjct: 311 VCCMKDNYLF--LKEVKNLVEKTNCELKVCFQYLNRGDRWIQ-DEIEFGYI 358


>gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]
          Length = 1383

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 79  GVIFGG-TDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWVDPVFTREVKAK 137
           GVI GG T  NE     E ++  G+ L +  F     +     A ++W++ V     + +
Sbjct: 352 GVIDGGSTSCNESVRNYENHSSGGKALAQREFYTVDGQKFSVTAYSEWIEGVSLSGFRVE 411

Query: 138 VKRAAGVRLIGEM 150
           V     + L+ ++
Sbjct: 412 VVDGVKLNLLDDV 424


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 26/202 (12%)

Query: 86  DVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWVDPVFTREVKAKV-----KR 140
           D+ E+  + +K     R  +EA  A    E + + A+ Q  + V  R V+ K      K 
Sbjct: 684 DIQEEKEEIQKKLSESRHQQEA--ATTQLEQLHQEAKRQ--EEVLARAVQEKEALVREKA 739

Query: 141 AAGVRLIG-EMPQEDLHAVVKNCFA---VVNSSVSEGMSA-AILEAMDLEVPVLARNIPG 195
           A  VRL   E  ++DL   ++   +   ++ SS+ E     +++E    ++ V  + +  
Sbjct: 740 ALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQ 799

Query: 196 NAAVVKHEVTGLLFS-------NPQEFVHLAKRLVS-----DPALEKEIVVNGREYVRMY 243
              V++ EV  L            QE    A++L         ALE++   + +E  ++ 
Sbjct: 800 AKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLR 859

Query: 244 HSWQVERDTYQQLIRKLEGSTE 265
             W+ ER  +QQ + K   S E
Sbjct: 860 EKWEKERSWHQQELAKALESLE 881


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,907,996
Number of Sequences: 37866
Number of extensions: 343398
Number of successful extensions: 719
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 6
length of query: 266
length of database: 18,247,518
effective HSP length: 100
effective length of query: 166
effective length of database: 14,460,918
effective search space: 2400512388
effective search space used: 2400512388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.