Search of human proteins with 19923881

Search of human proteins with 19923881

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]
         (276 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]        573   e-164
gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]        507   e-144
gi|6912586 6-phosphogluconolactonase [Homo sapiens]                    39   0.005
gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo sap...    33   0.35 
gi|21071067 TBP-associated factor 5 [Homo sapiens]                     30   2.3  
gi|157674354 WD repeat domain 72 [Homo sapiens]                        28   8.7  

>gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]
          Length = 276

 Score =  573 bits (1476), Expect = e-164
 Identities = 276/276 (100%), Positives = 276/276 (100%)

Query: 1   MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGH 60
           MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGH
Sbjct: 1   MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGH 60

Query: 61  LSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDA 120
           LSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDA
Sbjct: 61  LSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDA 120

Query: 121 FENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSK 180
           FENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSK
Sbjct: 121 FENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSK 180

Query: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCD 240
           VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCD
Sbjct: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCD 240

Query: 241 EDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKDGN 276
           EDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKDGN
Sbjct: 241 EDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKDGN 276


>gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]
          Length = 289

 Score =  507 bits (1305), Expect = e-144
 Identities = 241/274 (87%), Positives = 261/274 (95%)

Query: 1   MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGH 60
           M+L+IL++Y  ASEWAAKYI NRIIQF PG ++YFTLGLPTGSTPLGCYKKLIEY+KNG 
Sbjct: 1   MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGD 60

Query: 61  LSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDA 120
           LSFKYVKTFNMDEYVGLPR+HPESYHS+MWNNFFKHIDI P N HILDGNA DLQAECDA
Sbjct: 61  LSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDA 120

Query: 121 FENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSK 180
           FE KIK AGGI+LFVGGIGPDGHIAFNEPGSSLVSRTR+KTLAMDTILANA++FDG+L+K
Sbjct: 121 FEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTK 180

Query: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCD 240
           VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRT+FVCD
Sbjct: 181 VPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD 240

Query: 241 EDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKD 274
           EDATLEL+VKTVKYFKGLM VHNKLVDPL+S+K+
Sbjct: 241 EDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKE 274


>gi|6912586 6-phosphogluconolactonase [Homo sapiens]
          Length = 258

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 19/185 (10%)

Query: 77  LPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDAFENKIKEAGG------ 130
           +P +H ES +     +    + I P +  I       ++   + +  K+++A        
Sbjct: 83  VPFDHAESTYGLYRTHLLSRLPI-PESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPV 141

Query: 131 IDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGV 190
            DL + G+GPDGH     P   L+ + R K +A  +          D  K P   +T+ +
Sbjct: 142 FDLLILGVGPDGHTCSLFPDHPLL-QEREKIVAPIS----------DSPKPPPQRVTLTL 190

Query: 191 GTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHP-RTIFVCDEDATLELRV 249
             +  AR V+ + TG  KA  L + +E+   +    +  Q H  +  +  DE A   L V
Sbjct: 191 PVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLLTV 250

Query: 250 KTVKY 254
              K+
Sbjct: 251 PFEKH 255


>gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo
           sapiens]
          Length = 791

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 15/127 (11%)

Query: 35  FTLGLPTGSTPLGCYKKLIEYHKNGHLSFKYVKT--FNMDEYVGLPRNHPESYHSYMWNN 92
           F L L  GS+P+  +++L       H  F +  T  + +DE   +P + PES    +  +
Sbjct: 585 FHLALSGGSSPVALFQQLA----TAHYGFPWAHTHLWLVDERC-VPLSDPESNFQGLQAH 639

Query: 93  FFKHI-----DIDPNNAHILDGNAADLQAECDAFENKIKEA---GGIDLFVGGIGPDGHI 144
             +H+     +I P   H+     A+       +  +I         DL + G+G DGH 
Sbjct: 640 LLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSSFDLVLLGMGADGHT 699

Query: 145 AFNEPGS 151
           A   P S
Sbjct: 700 ASLFPQS 706


>gi|21071067 TBP-associated factor 5 [Homo sapiens]
          Length = 800

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 64  KYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDID-----PNNAHILDGNAADLQAEC 118
           K+V   + D Y  L R+  E  ++ +WN   +H+ ID     P +   +D     L  E 
Sbjct: 304 KFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEA 363

Query: 119 DAFENKIKEAGGI 131
               NK K   G+
Sbjct: 364 KREANKSKVFFGL 376


>gi|157674354 WD repeat domain 72 [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 20  ICNRIIQFKPGQDRYFTLG-LPTGSTPLGCYKKLIEYHKNGHLSFKYVKTFNMDEYVGLP 78
           +C+  +Q    Q R F +G +     P   YK L     +G ++  ++    + ++ G P
Sbjct: 309 LCSTSVQENKEQSRPFVMGYMNERKEPF--YKVLFSGEVSGRITLWHIPDVPVSKFDGSP 366

Query: 79  RNHPESYHSYMWNNFFKH 96
           R  P +    + +NF KH
Sbjct: 367 REIPVTATWTLQDNFDKH 384


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,460,627
Number of Sequences: 37866
Number of extensions: 452527
Number of successful extensions: 709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 707
Number of HSP's gapped (non-prelim): 6
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.