Search of human proteins with 19557691

Search of human proteins with 19557691

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19557691 surfeit 4 [Homo sapiens]
         (269 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19557691 surfeit 4 [Homo sapiens]                                  541   e-154
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       32   0.76 
gi|21071001 autocrine motility factor receptor [Homo sapiens]          30   2.2  
gi|196123581 cytochrome c oxidase subunit I [Homo sapiens neande...    30   2.9  
gi|251831109 cytochrome c oxidase subunit I [Homo sapiens]             30   2.9  
gi|206597487 solute carrier family 5 (sodium/glucose cotransport...    30   2.9  
gi|206597483 solute carrier family 5 (sodium/glucose cotransport...    30   2.9  
gi|40806181 receptor interacting protein kinase 5 isoform 2 [Hom...    28   6.4  
gi|40806179 receptor interacting protein kinase 5 isoform 1 [Hom...    28   6.4  
gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo...    28   8.4  

>gi|19557691 surfeit 4 [Homo sapiens]
          Length = 269

 Score =  541 bits (1395), Expect = e-154
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 1   MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWN 60
           MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWN
Sbjct: 1   MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWN 60

Query: 61  CGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRN 120
           CGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRN
Sbjct: 61  CGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRN 120

Query: 121 LALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFF 180
           LALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFF
Sbjct: 121 LALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFF 180

Query: 181 SIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFF 240
           SIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFF
Sbjct: 181 SIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFF 240

Query: 241 QTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
           QTMSVIGGLLLVVALGPGGVSMDEKKKEW
Sbjct: 241 QTMSVIGGLLLVVALGPGGVSMDEKKKEW 269


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 200  KTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIG 247
            +TK  A +LV WL +I++ ++  W + V    + FL   ++ TMSV+G
Sbjct: 4589 ETKAEAASLVSWLSSIDMKYH-IWKLGVVFTDNSFLYLAWYTTMSVLG 4635


>gi|21071001 autocrine motility factor receptor [Homo sapiens]
          Length = 643

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 23/90 (25%)

Query: 88  NFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLL-----LAESRSEGKSMF 142
           NF+ Y    +FG++ +QT+   ++W L F         GL+ L     L + R E  S  
Sbjct: 124 NFIFYKFIFIFGVLNVQTVEEVVMWCLWF--------AGLVFLHLMVQLCKDRFEYLSF- 174

Query: 143 AGVPTMRESSPKQYMQLGGRVLLVLMFMTL 172
                    SP   M   GRVL +L+ M L
Sbjct: 175 ---------SPTTPMSSHGRVLSLLVAMLL 195


>gi|196123581 cytochrome c oxidase subunit I [Homo sapiens
           neanderthalensis]
          Length = 513

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 21  TKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQLTG 80
           T+ Y      +  I T    G+++ F W       +  W+   L A  F+FL  +G LTG
Sbjct: 301 TRAYFTSATMIIAIPT----GVKV-FSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTG 355

Query: 81  CVLVLS 86
            VL  S
Sbjct: 356 IVLANS 361


>gi|251831109 cytochrome c oxidase subunit I [Homo sapiens]
          Length = 513

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 21  TKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQLTG 80
           T+ Y      +  I T    G+++ F W       +  W+   L A  F+FL  +G LTG
Sbjct: 301 TRAYFTSATMIIAIPT----GVKV-FSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTG 355

Query: 81  CVLVLS 86
            VL  S
Sbjct: 356 IVLANS 361


>gi|206597487 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 1 [Homo sapiens]
          Length = 706

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 143 AGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTK 202
           AGV TM +   K++   G R+ + +  ++L+ +   F  I  +I   AL I +A+G+   
Sbjct: 157 AGVVTMPQYLKKRFG--GQRIQVYMSVLSLILY--IFTKISTDIFSGALFIQMALGWNLY 212

Query: 203 LAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALG 256
           L+   L+V          A +TI     +   +  D  QT+ ++GG L+++ LG
Sbjct: 213 LSTGILLV--------VTAVYTIA--GGLMAVIYTDALQTVIMVGGALVLMFLG 256


>gi|206597483 solute carrier family 5 (sodium/glucose
           cotransporter), member 9 isoform 2 [Homo sapiens]
          Length = 681

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 143 AGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTK 202
           AGV TM +   K++   G R+ + +  ++L+ +   F  I  +I   AL I +A+G+   
Sbjct: 132 AGVVTMPQYLKKRFG--GQRIQVYMSVLSLILY--IFTKISTDIFSGALFIQMALGWNLY 187

Query: 203 LAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALG 256
           L+   L+V          A +TI     +   +  D  QT+ ++GG L+++ LG
Sbjct: 188 LSTGILLV--------VTAVYTIA--GGLMAVIYTDALQTVIMVGGALVLMFLG 231


>gi|40806181 receptor interacting protein kinase 5 isoform 2 [Homo
           sapiens]
          Length = 884

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 8   GTAEDFADQFLRVTKQYLPHVARLCLISTFLED 40
           G  E   D +LRV K + P +ARL L S  L+D
Sbjct: 613 GRLEKTEDLWLRVRKDHAPRLARLSLESCSLQD 645


>gi|40806179 receptor interacting protein kinase 5 isoform 1 [Homo
           sapiens]
          Length = 929

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 8   GTAEDFADQFLRVTKQYLPHVARLCLISTFLED 40
           G  E   D +LRV K + P +ARL L S  L+D
Sbjct: 613 GRLEKTEDLWLRVRKDHAPRLARLSLESCSLQD 645


>gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo
           sapiens]
          Length = 938

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 9/95 (9%)

Query: 163 VLLVLMFMTLLHFDASFFSIV----QNIVGTALMILVAIGFKTKLAALTLVVWLFAINVY 218
           ++L L+  +LLH  A F  I     Q IVG  LMIL+ I     L  L  +  ++ I ++
Sbjct: 129 LVLALLETSLLHHFAGFSQISKSNSQAIVGYGLMILLII-----LWILREIQSVYIIGIF 183

Query: 219 FNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVV 253
            N F+   V      F K      + ++  +LL +
Sbjct: 184 RNPFYPKDVQTVTVFFEKQTRLMKIGIVRRILLTL 218


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.143    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,756,504
Number of Sequences: 37866
Number of extensions: 325835
Number of successful extensions: 812
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 805
Number of HSP's gapped (non-prelim): 14
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.