Search of human proteins with 195539343

Search of human proteins with 195539343

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195539343 elongation of very long chain fatty acids-like 6
[Homo sapiens]
         (265 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195539343 elongation of very long chain fatty acids-like 6 [H...   554   e-158
gi|13129088 elongation of very long chain fatty acids-like 6 [Ho...   554   e-158
gi|23097310 elongation of very long chain fatty acids like 3 [Ho...   250   8e-67
gi|157388949 elongation of very long chain fatty acids-like 7 [H...    84   1e-16
gi|157388947 elongation of very long chain fatty acids-like 7 [H...    84   1e-16
gi|12232379 elongation of very long chain fatty acids-like 4 [Ho...    80   2e-15
gi|11464975 elongation of very long chain fatty acids-like 5 [Ho...    74   1e-13
gi|157388945 elongation of very long chain fatty acids-like 2 [H...    74   2e-13
gi|13489093 elongation of very long chain fatty acids-like 1 [Ho...    73   2e-13
gi|74275350 translocator protein isoform PBR [Homo sapiens]            28   8.3  

>gi|195539343 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score =  554 bits (1428), Expect = e-158
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR 60
           MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR
Sbjct: 1   MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR 60

Query: 61  KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK 120
           KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK
Sbjct: 61  KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK 120

Query: 121 APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY 180
           APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY
Sbjct: 121 APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY 180

Query: 181 YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL 240
           YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL
Sbjct: 181 YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL 240

Query: 241 SYLVLFCHFFFEAYIGKMRKTTKAE 265
           SYLVLFCHFFFEAYIGKMRKTTKAE
Sbjct: 241 SYLVLFCHFFFEAYIGKMRKTTKAE 265


>gi|13129088 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score =  554 bits (1428), Expect = e-158
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR 60
           MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR
Sbjct: 1   MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELR 60

Query: 61  KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK 120
           KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK
Sbjct: 61  KPLVLWSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSK 120

Query: 121 APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY 180
           APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY
Sbjct: 121 APELGDTIFIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSY 180

Query: 181 YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL 240
           YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL
Sbjct: 181 YALRAAGFRVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYL 240

Query: 241 SYLVLFCHFFFEAYIGKMRKTTKAE 265
           SYLVLFCHFFFEAYIGKMRKTTKAE
Sbjct: 241 SYLVLFCHFFFEAYIGKMRKTTKAE 265


>gi|23097310 elongation of very long chain fatty acids like 3 [Homo
           sapiens]
          Length = 270

 Score =  250 bits (639), Expect = 8e-67
 Identities = 118/258 (45%), Positives = 168/258 (65%), Gaps = 4/258 (1%)

Query: 9   QEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSL 68
           Q Y FE      +   + +E W  SF  + +Y   I  G++ M +R  F L+ PL+LWS 
Sbjct: 16  QPYNFELS---KDMRPFFEEYWATSFPIALIYLVLIAVGQNYMKERKGFNLQGPLILWSF 72

Query: 69  TLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSKAPELGDTI 128
            LA+FSI GA+R    M  +L+T GLKQ+VC   F +    KFW++ F+LSK  ELGDT 
Sbjct: 73  CLAIFSILGAVRMWGIMGTVLLTGGLKQTVCFINFIDNSTVKFWSWVFLLSKVIELGDTA 132

Query: 129 FIILRKQKLIFLHWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSYYALRAAGF 188
           FIILRK+ LIF+HWYHH TVL+Y+ + YK+ V  GGWF+TMN+GVHA+MY+YY L+AA  
Sbjct: 133 FIILRKRPLIFIHWYHHSTVLVYTSFGYKNKVPAGGWFVTMNFGVHAIMYTYYTLKAANV 192

Query: 189 RVSRKFAMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCH 248
           +  +   M IT  QI QM +G +V+ L + W Q   CH+  +++FWS ++Y++Y +LF H
Sbjct: 193 KPPKMLPMLITSLQILQMFVGAIVSILTYIWRQDQGCHTTMEHLFWSFILYMTYFILFAH 252

Query: 249 FFFEAYI-GKMRKTTKAE 265
           FF + YI  K++  TK++
Sbjct: 253 FFCQTYIRPKVKAKTKSQ 270


>gi|157388949 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 34/236 (14%)

Query: 47  GRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAYMVY--ILMTKGLKQSV-CDQGF 103
           G  LM  R  FEL+K ++ ++  + +FS+        YM Y  ++   G+  S  CD   
Sbjct: 52  GPKLMENRKPFELKKAMITYNFFIVLFSV--------YMCYEFVMSGWGIGYSFRCDIVD 103

Query: 104 YNGPVSKF------WAYAFVLSKAPELGDTIFIILRKQ--KLIFLHWYHHITVLLYSWYS 155
           Y+   +        W Y F  SK  EL DTIF +LRK+  ++ FLH +HH T++ ++W+ 
Sbjct: 104 YSRSPTALRMARTCWLYYF--SKFIELLDTIFFVLRKKNSQVTFLHVFHH-TIMPWTWWF 160

Query: 156 YKDMVAGG-GWFMTM-NYGVHAVMYSYYALRAAG--FRVSRKFAMFITLSQITQMLMGCV 211
                AGG G F  + N  VH VMYSYY L A G  ++    +  ++T  Q+ Q ++   
Sbjct: 161 GVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVI-VA 219

Query: 212 VNYLVFCWMQHDQCHSHFQNIFWSSLMYLS--YLVLFCHFFFEAYIGKMR--KTTK 263
           ++   F +M  + C   F  +F   +M  S  +L+LF HF++ AY    R  KT K
Sbjct: 220 IHISQFFFM--EDCKYQFP-VFACIIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK 272


>gi|157388947 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 34/236 (14%)

Query: 47  GRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAYMVY--ILMTKGLKQSV-CDQGF 103
           G  LM  R  FEL+K ++ ++  + +FS+        YM Y  ++   G+  S  CD   
Sbjct: 52  GPKLMENRKPFELKKAMITYNFFIVLFSV--------YMCYEFVMSGWGIGYSFRCDIVD 103

Query: 104 YNGPVSKF------WAYAFVLSKAPELGDTIFIILRKQ--KLIFLHWYHHITVLLYSWYS 155
           Y+   +        W Y F  SK  EL DTIF +LRK+  ++ FLH +HH T++ ++W+ 
Sbjct: 104 YSRSPTALRMARTCWLYYF--SKFIELLDTIFFVLRKKNSQVTFLHVFHH-TIMPWTWWF 160

Query: 156 YKDMVAGG-GWFMTM-NYGVHAVMYSYYALRAAG--FRVSRKFAMFITLSQITQMLMGCV 211
                AGG G F  + N  VH VMYSYY L A G  ++    +  ++T  Q+ Q ++   
Sbjct: 161 GVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVI-VA 219

Query: 212 VNYLVFCWMQHDQCHSHFQNIFWSSLMYLS--YLVLFCHFFFEAYIGKMR--KTTK 263
           ++   F +M  + C   F  +F   +M  S  +L+LF HF++ AY    R  KT K
Sbjct: 220 IHISQFFFM--EDCKYQFP-VFACIIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK 272


>gi|12232379 elongation of very long chain fatty acids-like 4 [Homo
           sapiens]
          Length = 314

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 39/268 (14%)

Query: 7   TLQEYEFEKQFNENEAIQW--MQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLV 64
           T++ Y +     +     W  MQ  W  +   S LY  F++ G   M  R  F++R  L+
Sbjct: 22  TVEFYRWTWSIADKRVENWPLMQSPWP-TLSISTLYLLFVWLGPKWMKDREPFQMRLVLI 80

Query: 65  LWSLTLAVFS--IFGALRTGAYMV---YILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLS 119
           +++  + + +  IF  L  G+Y     YI  +     +V +        +  W Y   +S
Sbjct: 81  IYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVRI----AAALWWY--FVS 134

Query: 120 KAPELGDTIFIILRKQ--KLIFLHWYHHITVLLYSWYSYKDMVAGGGWF-MTMNYGVHAV 176
           K  E  DT+F ILRK+  ++ FLH YHH T+    W   K +  G  +F   +N  +H +
Sbjct: 135 KGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVI 194

Query: 177 MYSYYALRAAGFRVSRK--FAMFITLSQITQM---LMGCVVNYLVFC----WMQHDQCHS 227
           MYSYY L A G  + +   +  ++T+ Q+ Q    +    ++    C    WM       
Sbjct: 195 MYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMH------ 248

Query: 228 HFQNIFWSSLMY-LSYLVLFCHFFFEAY 254
                 W+ + Y +S++ LF +F+   Y
Sbjct: 249 ------WALIAYAISFIFLFLNFYIRTY 270


>gi|11464975 elongation of very long chain fatty acids-like 5 [Homo
           sapiens]
          Length = 299

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 18/238 (7%)

Query: 25  WMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSI--FGALRTG 82
           ++ +N+  +F+ S +Y   ++ G   M  +  F  R  LV+++L L + S+  F  L TG
Sbjct: 27  FLLDNYIPTFICSVIYLLIVWLGPKYMRNKQPFSCRGILVVYNLGLTLLSLYMFCELVTG 86

Query: 83  AYM-VYILMTKGLKQSVCDQGFYNGPVSK-FWAYAFVLSKAPELGDTIFIILRKQ--KLI 138
            +   Y    +G + +    G  +  + +  W Y F  SK  E  DT F ILRK   ++ 
Sbjct: 87  VWEGKYNFFCQGTRTA----GESDMKIIRVLWWYYF--SKLIEFMDTFFFILRKNNHQIT 140

Query: 139 FLHWYHHITVLLYSWYSYKDMVAGGGWF-MTMNYGVHAVMYSYYALRAA-GFRVSRKFAM 196
            LH YHH ++L   W+    +  G  +F  T+N  +H +MYSYY L +    R    +  
Sbjct: 141 VLHVYHHASMLNIWWFVMNWVPCGHSYFGATLNSFIHVLMYSYYGLSSVPSMRPYLWWKK 200

Query: 197 FITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCHFFFEAY 254
           +IT  Q+ Q ++  +       W     C      +++     +S + LF +F+ + Y
Sbjct: 201 YITQGQLLQFVLTIIQTSCGVIW----PCTFPLGWLYFQIGYMISLIALFTNFYIQTY 254


>gi|157388945 elongation of very long chain fatty acids-like 2 [Homo
           sapiens]
          Length = 296

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 30/255 (11%)

Query: 25  WMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAY 84
           +M +++  +F  + +Y   I+ G   M  R    LR  L L++L + + S        AY
Sbjct: 30  FMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLS--------AY 81

Query: 85  MVYILMTKGLK-------QSVCDQGFYNGPVSK-FWAYAFVLSKAPELGDTIFIILRKQ- 135
           M+  L+    +       Q +   G  +  V+K  W Y F  SK+ E  DTIF +LRK+ 
Sbjct: 82  MLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYYF--SKSVEFLDTIFFVLRKKT 139

Query: 136 -KLIFLHWYHHITVLLYSWYSYKDMVAGGGWF-MTMNYGVHAVMYSYYALRAAGFRVSRK 193
            ++ FLH YHH ++    W     +  G  +F  T+N  +H +MYSYY L    F    K
Sbjct: 140 SQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSV--FPSMHK 197

Query: 194 F---AMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCHFF 250
           +     ++T +Q+ Q ++   + + +   ++   C   F  + + S   L+ ++LF +F+
Sbjct: 198 YLWWKKYLTQAQLVQFVL--TITHTMSAVVK--PCGFPFGCLIFQSSYMLTLVILFLNFY 253

Query: 251 FEAYIGKMRKTTKAE 265
            + Y  K  K    E
Sbjct: 254 VQTYRKKPMKKDMQE 268


>gi|13489093 elongation of very long chain fatty acids-like 1 [Homo
           sapiens]
          Length = 279

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 23/234 (9%)

Query: 33  SFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAYMVYILMTK 92
           S L + +Y     G R +M  R  F+LR  +++++ +L   S+        Y+VY  +  
Sbjct: 33  SILLTYVYFVLSLGPR-IMANRKPFQLRGFMIVYNFSLVALSL--------YIVYEFLMS 83

Query: 93  GLKQSV---CDQGFY-NGPVSKFW---AYAFVLSKAPELGDTIFIILRKQ--KLIFLHWY 143
           G   +    CD   Y N P +      A+ F+ SK  EL DT+  ILRK+  ++ FLH +
Sbjct: 84  GWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVF 143

Query: 144 HHITVLLYSWYSYKDMVAGG-GWFMTM-NYGVHAVMYSYYALRAAGFRVSRKFAMFITLS 201
           HH +VL +SW+    +  GG G F  M N  VH +MY YY L A G  V++ +  +    
Sbjct: 144 HH-SVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFG-PVAQPYLWWKKHM 201

Query: 202 QITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMY-LSYLVLFCHFFFEAY 254
              Q++   +V+  +  +     C+  +  I     MY   + +LF +F++ +Y
Sbjct: 202 TAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSY 255


>gi|74275350 translocator protein isoform PBR [Homo sapiens]
          Length = 169

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/60 (23%), Positives = 31/60 (51%)

Query: 66  WSLTLAVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSKAPELG 125
           W L     +++ A+  G+Y+V+  +    +++V   G Y G ++  WA+  +   A ++G
Sbjct: 47  WVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMG 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.331    0.140    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,800,389
Number of Sequences: 37866
Number of extensions: 337130
Number of successful extensions: 791
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 764
Number of HSP's gapped (non-prelim): 10
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.