BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|194328779 aspartate beta-hydroxylase domain containing 2 [Homo sapiens] (369 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|194328779 aspartate beta-hydroxylase domain containing 2 [Hom... 792 0.0 gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo... 283 2e-76 gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens] 103 3e-22 gi|239757736 PREDICTED: hypothetical protein [Homo sapiens] 30 3.5 gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo ... 30 3.5 gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens] 30 4.5 gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 29 7.7 gi|48717241 zinc finger protein 425 [Homo sapiens] 29 7.7 >gi|194328779 aspartate beta-hydroxylase domain containing 2 [Homo sapiens] Length = 369 Score = 792 bits (2046), Expect = 0.0 Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA 60 MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA Sbjct: 1 MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA 60 Query: 61 VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE 120 VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE Sbjct: 61 VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE 120 Query: 121 GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS 180 GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS Sbjct: 121 GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS 180 Query: 181 RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV 240 RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV Sbjct: 181 RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV 240 Query: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP 300 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP Sbjct: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP 300 Query: 301 NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA 360 NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA Sbjct: 301 NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA 360 Query: 361 LDFIFAPGR 369 LDFIFAPGR Sbjct: 361 LDFIFAPGR 369 >gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo sapiens] Length = 390 Score = 283 bits (724), Expect = 2e-76 Identities = 155/314 (49%), Positives = 190/314 (60%), Gaps = 25/314 (7%) Query: 67 LLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQ-----SP----ECVRCT 117 L LF+WYCY +G + + +L + A G++ G V C SP + Sbjct: 87 LTSLFLWYCYRLGSQD------MQALGAGSRAGGVRGGPVGCSEAGGPSPGGPGDPGEGP 140 Query: 118 HNEGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPS---IQKPEVFFLPDLP 174 EGL + L+ YA+RYSW+GMGR+ + + G P IQ+P + FLPDLP Sbjct: 141 RTEGLVSR---RLRAYARRYSWAGMGRVRRAA-QGGPGPGRGPGVLGIQRPGLLFLPDLP 196 Query: 175 TTPYFSRDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLP-QGWKMNSTPSGEWFTFYL 233 + P+ RDAQ+HDVE+LE +F IL +F + FS + P +GW P + L Sbjct: 197 SAPFVPRDAQRHDVELLESSFPAILRDFGAVSWDFSGTTPPPRGWSPPLAPG--CYQLLL 254 Query: 234 VNQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRC 293 G C P NCR+CP YR L LR+ + N FGNA SVL PG + GPTN R+RC Sbjct: 255 YQAGRCQPSNCRRCPGAYRALRGLRSFMSANTFGNAGFSVLLPGARLEGRCGPTNARVRC 314 Query: 294 HLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNV 353 HLGLK P GCELVVGGEPQCWAEG CLL DDSFLH H GS EDGPRVVF+VDLWHPNV Sbjct: 315 HLGLKIPPGCELVVGGEPQCWAEGHCLLVDDSFLHTVAHNGSPEDGPRVVFIVDLWHPNV 374 Query: 354 AAAERQALDFIFAP 367 A AERQALDF+FAP Sbjct: 375 AGAERQALDFVFAP 388 >gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens] Length = 758 Score = 103 bits (256), Expect = 3e-22 Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 7/178 (3%) Query: 188 VEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCVPRNCRKC 247 V+ LERN++ I E + LP+ N G+W F L QG C+ Sbjct: 587 VKSLERNWKLIRDEGLAVMDKAKGLFLPED--ENLREKGDWSQFTLWQQGRRNENACKGA 644 Query: 248 PRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP-NGCELV 306 P+T LL G G S++ PGT + H GPTN R+R HLGL P GC++ Sbjct: 645 PKTCTLLEKFPETTGCRR-GQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIR 703 Query: 307 VGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQALDFI 364 E + W EG+ L+FDDSF H + + S+ R++F+VD+WHP + +R++L I Sbjct: 704 CANETKTWEEGKVLIFDDSFEHEVWQDASSF---RLIFIVDVWHPELTPQQRRSLPAI 758 >gi|239757736 PREDICTED: hypothetical protein [Homo sapiens] Length = 273 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170 TH E L ++ E+ A R + H G++ QG L P K FL Sbjct: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241 Query: 171 PDLPTTPYFSRDAQKHDVEVL 191 P TP S H + VL Sbjct: 242 SCPPATPSASPGPPAHSIPVL 262 >gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo sapiens] Length = 273 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170 TH E L ++ E+ A R + H G++ QG L P K FL Sbjct: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241 Query: 171 PDLPTTPYFSRDAQKHDVEVL 191 P TP S H + VL Sbjct: 242 SCPPATPSASPGPPAHSIPVL 262 >gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens] Length = 153 Score = 29.6 bits (65), Expect = 4.5 Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 340 PRVVFMVDLWHPNVAAAERQALDFI 364 P+V FM ++HPNV ER +LD + Sbjct: 68 PKVRFMTKIYHPNVDKLERISLDIL 92 >gi|114431248 hypothetical protein LOC205717 [Homo sapiens] Length = 2245 Score = 28.9 bits (63), Expect = 7.7 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 108 CQSPECVRCTHNEG---LNQKLYHNLQEYAKRYSWSGMGRIH-KGIREQGRYLNSR 159 C++P R HN LNQ + H Q+ R SG+ H G R L SR Sbjct: 1579 CENPSTSRNHHNHPQNHLNQDIMHQQQDVGSRQQGSGVSSEHVSGHNPMQRLLTSR 1634 >gi|48717241 zinc finger protein 425 [Homo sapiens] Length = 752 Score = 28.9 bits (63), Expect = 7.7 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLK 298 P C +C +T+RL G+L++ + + G S + G T+ Y T IR H G K Sbjct: 609 PYQCPECEKTFRLKGNLKSHLLQH-SGQKPFSCVMCGKSFTQQYRLTE-HIRVHSGEK 664 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.139 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,984,190 Number of Sequences: 37866 Number of extensions: 822699 Number of successful extensions: 1562 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1551 Number of HSP's gapped (non-prelim): 9 length of query: 369 length of database: 18,247,518 effective HSP length: 104 effective length of query: 265 effective length of database: 14,309,454 effective search space: 3792005310 effective search space used: 3792005310 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.