Guide to the Human Genome
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Search of human proteins with 194328779

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194328779 aspartate beta-hydroxylase domain containing 2
[Homo sapiens]
         (369 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194328779 aspartate beta-hydroxylase domain containing 2 [Hom...   792   0.0  
gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo...   283   2e-76
gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens]       103   3e-22
gi|239757736 PREDICTED: hypothetical protein [Homo sapiens]            30   3.5  
gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo ...    30   3.5  
gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]       30   4.5  
gi|114431248 hypothetical protein LOC205717 [Homo sapiens]             29   7.7  
gi|48717241 zinc finger protein 425 [Homo sapiens]                     29   7.7  

>gi|194328779 aspartate beta-hydroxylase domain containing 2 [Homo
           sapiens]
          Length = 369

 Score =  792 bits (2046), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA 60
           MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA
Sbjct: 1   MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTA 60

Query: 61  VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE 120
           VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE
Sbjct: 61  VITVACLLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNE 120

Query: 121 GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS 180
           GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS
Sbjct: 121 GLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFS 180

Query: 181 RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV 240
           RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV
Sbjct: 181 RDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCV 240

Query: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP 300
           PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP
Sbjct: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP 300

Query: 301 NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA 360
           NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA
Sbjct: 301 NGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQA 360

Query: 361 LDFIFAPGR 369
           LDFIFAPGR
Sbjct: 361 LDFIFAPGR 369


>gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo
           sapiens]
          Length = 390

 Score =  283 bits (724), Expect = 2e-76
 Identities = 155/314 (49%), Positives = 190/314 (60%), Gaps = 25/314 (7%)

Query: 67  LLVLFVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQ-----SP----ECVRCT 117
           L  LF+WYCY +G +       + +L   + A G++ G V C      SP    +     
Sbjct: 87  LTSLFLWYCYRLGSQD------MQALGAGSRAGGVRGGPVGCSEAGGPSPGGPGDPGEGP 140

Query: 118 HNEGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGRYLNSRPS---IQKPEVFFLPDLP 174
             EGL  +    L+ YA+RYSW+GMGR+ +   + G      P    IQ+P + FLPDLP
Sbjct: 141 RTEGLVSR---RLRAYARRYSWAGMGRVRRAA-QGGPGPGRGPGVLGIQRPGLLFLPDLP 196

Query: 175 TTPYFSRDAQKHDVEVLERNFQTILCEFETLYKAFSNCSLP-QGWKMNSTPSGEWFTFYL 233
           + P+  RDAQ+HDVE+LE +F  IL +F  +   FS  + P +GW     P    +   L
Sbjct: 197 SAPFVPRDAQRHDVELLESSFPAILRDFGAVSWDFSGTTPPPRGWSPPLAPG--CYQLLL 254

Query: 234 VNQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRC 293
              G C P NCR+CP  YR L  LR+ +  N FGNA  SVL PG  +    GPTN R+RC
Sbjct: 255 YQAGRCQPSNCRRCPGAYRALRGLRSFMSANTFGNAGFSVLLPGARLEGRCGPTNARVRC 314

Query: 294 HLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNV 353
           HLGLK P GCELVVGGEPQCWAEG CLL DDSFLH   H GS EDGPRVVF+VDLWHPNV
Sbjct: 315 HLGLKIPPGCELVVGGEPQCWAEGHCLLVDDSFLHTVAHNGSPEDGPRVVFIVDLWHPNV 374

Query: 354 AAAERQALDFIFAP 367
           A AERQALDF+FAP
Sbjct: 375 AGAERQALDFVFAP 388


>gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens]
          Length = 758

 Score =  103 bits (256), Expect = 3e-22
 Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 7/178 (3%)

Query: 188 VEVLERNFQTILCEFETLYKAFSNCSLPQGWKMNSTPSGEWFTFYLVNQGVCVPRNCRKC 247
           V+ LERN++ I  E   +        LP+    N    G+W  F L  QG      C+  
Sbjct: 587 VKSLERNWKLIRDEGLAVMDKAKGLFLPED--ENLREKGDWSQFTLWQQGRRNENACKGA 644

Query: 248 PRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLKTP-NGCELV 306
           P+T  LL       G    G    S++ PGT +  H GPTN R+R HLGL  P  GC++ 
Sbjct: 645 PKTCTLLEKFPETTGCRR-GQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIR 703

Query: 307 VGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWHPNVAAAERQALDFI 364
              E + W EG+ L+FDDSF H  + + S+    R++F+VD+WHP +   +R++L  I
Sbjct: 704 CANETKTWEEGKVLIFDDSFEHEVWQDASSF---RLIFIVDVWHPELTPQQRRSLPAI 758


>gi|239757736 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 273

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170
           TH E     L  ++ E+      A R     +   H G++ QG  L   P   K    FL
Sbjct: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241

Query: 171 PDLPTTPYFSRDAQKHDVEVL 191
              P TP  S     H + VL
Sbjct: 242 SCPPATPSASPGPPAHSIPVL 262


>gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo
           sapiens]
          Length = 273

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170
           TH E     L  ++ E+      A R     +   H G++ QG  L   P   K    FL
Sbjct: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241

Query: 171 PDLPTTPYFSRDAQKHDVEVL 191
              P TP  S     H + VL
Sbjct: 242 SCPPATPSASPGPPAHSIPVL 262


>gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]
          Length = 153

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 340 PRVVFMVDLWHPNVAAAERQALDFI 364
           P+V FM  ++HPNV   ER +LD +
Sbjct: 68  PKVRFMTKIYHPNVDKLERISLDIL 92


>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
          Length = 2245

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 108  CQSPECVRCTHNEG---LNQKLYHNLQEYAKRYSWSGMGRIH-KGIREQGRYLNSR 159
            C++P   R  HN     LNQ + H  Q+   R   SG+   H  G     R L SR
Sbjct: 1579 CENPSTSRNHHNHPQNHLNQDIMHQQQDVGSRQQGSGVSSEHVSGHNPMQRLLTSR 1634


>gi|48717241 zinc finger protein 425 [Homo sapiens]
          Length = 752

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 241 PRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITEHYGPTNIRIRCHLGLK 298
           P  C +C +T+RL G+L++ +  +  G    S +  G   T+ Y  T   IR H G K
Sbjct: 609 PYQCPECEKTFRLKGNLKSHLLQH-SGQKPFSCVMCGKSFTQQYRLTE-HIRVHSGEK 664


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,984,190
Number of Sequences: 37866
Number of extensions: 822699
Number of successful extensions: 1562
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1551
Number of HSP's gapped (non-prelim): 9
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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