Search of human proteins with 194097432

Search of human proteins with 194097432

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]
         (564 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]         1176   0.0  
gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]         1176   0.0  
gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]         1176   0.0  
gi|7662276 hypothetical protein LOC9747 [Homo sapiens]                741   0.0  
gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]     182   5e-46
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]         32   1.5  
gi|117190324 diphthine synthase isoform b [Homo sapiens]               30   5.9  

>gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]
          Length = 564

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD
Sbjct: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120
           KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC
Sbjct: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120

Query: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180
           FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL
Sbjct: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180

Query: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240
           HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS
Sbjct: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240

Query: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300
           LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL
Sbjct: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300

Query: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360
           TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK
Sbjct: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360

Query: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420
           LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL
Sbjct: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420

Query: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480
           AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH
Sbjct: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480

Query: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540
           NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL
Sbjct: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540

Query: 541 CDWNVWTALETYLQVLSRNSGRRG 564
           CDWNVWTALETYLQVLSRNSGRRG
Sbjct: 541 CDWNVWTALETYLQVLSRNSGRRG 564


>gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD
Sbjct: 282 MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 341

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120
           KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC
Sbjct: 342 KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 401

Query: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180
           FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL
Sbjct: 402 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 461

Query: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240
           HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS
Sbjct: 462 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 521

Query: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300
           LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL
Sbjct: 522 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 581

Query: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360
           TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK
Sbjct: 582 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 641

Query: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420
           LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL
Sbjct: 642 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 701

Query: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480
           AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH
Sbjct: 702 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 761

Query: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540
           NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL
Sbjct: 762 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 821

Query: 541 CDWNVWTALETYLQVLSRNSGRRG 564
           CDWNVWTALETYLQVLSRNSGRRG
Sbjct: 822 CDWNVWTALETYLQVLSRNSGRRG 845



 Score = 96.3 bits (238), Expect = 7e-20
 Identities = 49/109 (44%), Positives = 65/109 (59%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           + PFLLNAV WL       VGV+ +L  L  +L + GL+  ++P     L VYC  AY+D
Sbjct: 74  LAPFLLNAVSWLCPCPGAPVGVHPSLAPLVNILQDAGLEAQVKPEPGEPLGVYCINAYND 133

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGL 109
                L +FV  GGGLLIGGQAW+WASQ+     L+ FPGN + +  G+
Sbjct: 134 TLTATLIQFVKHGGGLLIGGQAWYWASQHGPDKVLSRFPGNKVTSVAGV 182


>gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD
Sbjct: 282 MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 341

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120
           KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC
Sbjct: 342 KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 401

Query: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180
           FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL
Sbjct: 402 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 461

Query: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240
           HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS
Sbjct: 462 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 521

Query: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300
           LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL
Sbjct: 522 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 581

Query: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360
           TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK
Sbjct: 582 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 641

Query: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420
           LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL
Sbjct: 642 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 701

Query: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480
           AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH
Sbjct: 702 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 761

Query: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540
           NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL
Sbjct: 762 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 821

Query: 541 CDWNVWTALETYLQVLSRNSGRRG 564
           CDWNVWTALETYLQVLSRNSGRRG
Sbjct: 822 CDWNVWTALETYLQVLSRNSGRRG 845



 Score = 96.3 bits (238), Expect = 7e-20
 Identities = 49/109 (44%), Positives = 65/109 (59%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           + PFLLNAV WL       VGV+ +L  L  +L + GL+  ++P     L VYC  AY+D
Sbjct: 74  LAPFLLNAVSWLCPCPGAPVGVHPSLAPLVNILQDAGLEAQVKPEPGEPLGVYCINAYND 133

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGL 109
                L +FV  GGGLLIGGQAW+WASQ+     L+ FPGN + +  G+
Sbjct: 134 TLTATLIQFVKHGGGLLIGGQAWYWASQHGPDKVLSRFPGNKVTSVAGV 182


>gi|7662276 hypothetical protein LOC9747 [Homo sapiens]
          Length = 921

 Score =  741 bits (1913), Expect = 0.0
 Identities = 354/555 (63%), Positives = 435/555 (78%)

Query: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60
           +GPFLLNAVRWL  G+ GK+ V T L+ L  LL+  G+  S+EP+L SD  VYC +  S+
Sbjct: 282 LGPFLLNAVRWLDGGRRGKIVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSE 341

Query: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120
              K+LQEFVAEGGGL +G QAWWWA +NPG  PLA FPGN++LN FG+SI  Q+L  G 
Sbjct: 342 VGVKELQEFVAEGGGLFVGAQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGP 401

Query: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180
           F  P   +R+YHFR  L++FQ I+  + GN+EK  LAKL  DGAAFLQIPAE +PAY+S+
Sbjct: 402 FRTPKAGIRTYHFRSTLAEFQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSV 461

Query: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240
           HRLLRK+L    LP  +RENPV +D    A+LSLATGLAHSG+D S L   +     S  
Sbjct: 462 HRLLRKLLSRYRLPVATRENPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPY 521

Query: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300
           L PS+ PITVE+N  NPG   CW+STGLY+   Q  EVSL EAAASA L++QIGCHTDDL
Sbjct: 522 LRPSESPITVEVNCTNPGTRYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDL 581

Query: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360
           T+A KL R P+V ++C +D+  +S++CLWGGLLY+IVP+ S+LG VPVT++GAV APYYK
Sbjct: 582 TRASKLFRGPLVINRCCLDKPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYK 641

Query: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420
           LG+T+LEEWKR++QEN  PWGELATDNIILTVPT NL+ L++PEP+LRLWDE+MQAVARL
Sbjct: 642 LGETTLEEWKRRIQENPGPWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARL 701

Query: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480
            AEPFP R P+RIVADVQIS GWMH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG 
Sbjct: 702 GAEPFPLRLPQRIVADVQISVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGR 761

Query: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540
           NQQR  WEFPPHTTEATCNLW VYVHETVLGIPR++A+ AL PP RE+R++ +L KG  +
Sbjct: 762 NQQRQEWEFPPHTTEATCNLWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNV 821

Query: 541 CDWNVWTALETYLQV 555
            +WN WTALETYLQ+
Sbjct: 822 KNWNAWTALETYLQL 836



 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 45/107 (42%), Positives = 63/107 (58%)

Query: 3   PFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSDKE 62
           PFLLNAV WL       +GV+ +L  L  +L   G+   +EP +   L VYC  AY++  
Sbjct: 75  PFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVKDSLGVYCIDAYNETM 134

Query: 63  AKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGL 109
            ++L +F+  GGGLLIGGQAW WA+Q      L  FPGN++ +  G+
Sbjct: 135 TEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVAGI 181


>gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]
          Length = 195

 Score =  182 bits (463), Expect = 5e-46
 Identities = 79/112 (70%), Positives = 97/112 (86%)

Query: 444 MHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATCNLWSV 503
           MH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATCNLW V
Sbjct: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60

Query: 504 YVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 555
           YVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 112


>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
          Length = 485

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 473 GPIHEL-GHNQQRHGWEFPPHTTEATCNLWSVYVHETVLG 511
           GP  EL G   +R+GW +PPH  +     W +Y+   V+G
Sbjct: 29  GPSPELQGQRSRRNGWSWPPHPLQIVA--WLLYLFFAVIG 66


>gi|117190324 diphthine synthase isoform b [Homo sapiens]
          Length = 284

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 175 PAYISLHRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGT 234
           P Y+S+++  +++L       +  E PV  ++       L  GLA  G D  ++A G   
Sbjct: 185 PRYMSVNQAAQQLLEIVQNQRIRGEEPVTEET-------LCVGLARVGADDQKIAAGTLR 237

Query: 235 WTCSSSLYPSKHPITVEINGINP 257
             C+  L    H + +    I+P
Sbjct: 238 QMCTVDLGEPLHSLIITGGSIHP 260


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,646,526
Number of Sequences: 37866
Number of extensions: 1137116
Number of successful extensions: 2386
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2378
Number of HSP's gapped (non-prelim): 10
length of query: 564
length of database: 18,247,518
effective HSP length: 108
effective length of query: 456
effective length of database: 14,157,990
effective search space: 6456043440
effective search space used: 6456043440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.