Search of human proteins with 190360560

Search of human proteins with 190360560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190360560 MPV17 mitochondrial membrane protein-like isoform
2 [Homo sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2...   313   4e-86
gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1...   214   2e-56
gi|4505241 Mpv17 protein [Homo sapiens]                                52   1e-07
gi|29540543 sulfotransferase family, cytosolic, 1A, phenol-prefe...    44   6e-05
gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo s...    34   0.038
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     29   1.2  
gi|41393593 aarF domain containing kinase 5 [Homo sapiens]             28   2.8  
gi|34916028 solute carrier family 16 (monocarboxylic acid transp...    27   4.7  
gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo...    27   4.7  
gi|5032115 sprouty 2 [Homo sapiens]                                    27   4.7  
gi|148612890 serine-arginine repressor protein [Homo sapiens]          27   4.7  
gi|16418361 RFT1 homolog [Homo sapiens]                                27   6.1  
gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isofor...    27   6.1  
gi|50054463 olfactory receptor, family 52, subfamily N, member 1...    27   8.0  

>gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2
           [Homo sapiens]
          Length = 147

 Score =  313 bits (801), Expect = 4e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60
           MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA
Sbjct: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60

Query: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVEWTDVLALCTADQLQPC 120
           NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVEWTDVLALCTADQLQPC
Sbjct: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVEWTDVLALCTADQLQPC 120

Query: 121 SCSMENSLRWSLWFSLGHLHLFFPAEW 147
           SCSMENSLRWSLWFSLGHLHLFFPAEW
Sbjct: 121 SCSMENSLRWSLWFSLGHLHLFFPAEW 147


>gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1
           [Homo sapiens]
          Length = 196

 Score =  214 bits (545), Expect = 2e-56
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60
           MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA
Sbjct: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60

Query: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV 103
           NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV
Sbjct: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV 103


>gi|4505241 Mpv17 protein [Homo sapiens]
          Length = 176

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 5   WPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHANFNY 64
           W A  RA   HPW   VL  GSL+  GD + Q+L  R       R     +V+    F  
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63

Query: 65  V----WLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAF 101
                W ++L+R +PG      L K+L DQ   AP  +  F
Sbjct: 64  PVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCF 104


>gi|29540543 sulfotransferase family, cytosolic, 1A,
           phenol-preferring, member 1 isoform b [Homo sapiens]
          Length = 217

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 20/21 (95%), Positives = 21/21 (100%)

Query: 82  LLAKLLCDQVVGAPIAVSAFY 102
           +LAKLLCDQVVGAPIAVSAFY
Sbjct: 1   MLAKLLCDQVVGAPIAVSAFY 21


>gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo
           sapiens]
          Length = 206

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 19  TNVLLYGSLVSAGDALQQ--RLQGREANWRQTRRVATL--VVTFHANFNYVWLRLLERAL 74
           TN L  G+L++AGD ++Q   ++ R       RR A++  V      F + W   L+R  
Sbjct: 28  TNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASMFAVGCSMGPFLHYWYLSLDRLF 87

Query: 75  PG---RAPHALLAKLLCDQVVGAPI 96
           P    R    +L K+L DQ+V +P+
Sbjct: 88  PASGLRGFPNVLKKVLVDQLVASPL 112


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 8/53 (15%)

Query: 58  FHANFNYVWLRLLERALP--------GRAPHALLAKLLCDQVVGAPIAVSAFY 102
           FHAN   V L LL  A          GR P    A L  D  +GAP A  AFY
Sbjct: 354 FHANGTDVCLDLLGAAASLWAKTPNQGRRPPTATAGLRGDTALGAPSAPEAFY 406


>gi|41393593 aarF domain containing kinase 5 [Homo sapiens]
          Length = 580

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 65  VWLRLLERALPGR--APHALLAKLLCDQVVGAPIAVSAFYV 103
           V+ R   R LP R  +P  L  K+L   VVGAP+ + A YV
Sbjct: 27  VFFRRNVRGLPPRFSSPTPLWRKVLSTAVVGAPLLLGARYV 67


>gi|34916028 solute carrier family 16 (monocarboxylic acid
           transporters), member 9 [Homo sapiens]
          Length = 509

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)

Query: 81  ALLAKLLCDQVVGAPIAVSAFYVEWTD 107
           + L + LC    G+P+AV   Y+EW D
Sbjct: 19  SFLTQFLC---YGSPLAVGVLYIEWLD 42


>gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo
           sapiens]
          Length = 571

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 39  QGREANWRQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAP 95
           Q +   WR      ++V+TFH       LR +   L    PH +   +L D     P
Sbjct: 125 QCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDP 181


>gi|5032115 sprouty 2 [Homo sapiens]
          Length = 315

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 119 PCSCSMENSLRWSLWFSLGHLHLFFPAEW 147
           PCSCS  +    + W ++G + LF P  W
Sbjct: 241 PCSCSQSHCC--TRWSAMGVMSLFLPCLW 267


>gi|148612890 serine-arginine repressor protein [Homo sapiens]
          Length = 261

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 35  QQRLQGREANW-RQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHA 81
           Q+R + R ++W R  RR  +L  + H  F+Y   +   ++LP R+  A
Sbjct: 117 QRRTRSRSSSWGRNRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSA 164


>gi|16418361 RFT1 homolog [Homo sapiens]
          Length = 541

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 40  GREANWRQTRRVATLVV---TFHANF-NYVWLRLLERALPGRAPH 80
           G + +W QT  +  L V    F + F  ++WL+LLE   P   PH
Sbjct: 74  GTQRDWSQTLNLLWLTVPLGVFWSLFLGWIWLQLLEVPDPNVVPH 118


>gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isoform
          1 [Homo sapiens]
          Length = 268

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 45 WRQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHALLAKLLC 88
          W ++RRV    +TFH     +W   +    PG+ P A LA  LC
Sbjct: 20 WVRSRRVGMDEMTFH-----IWYPQVRA--PGQQPQAQLAMALC 56


>gi|50054463 olfactory receptor, family 52, subfamily N, member 1
           [Homo sapiens]
          Length = 320

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 10/55 (18%)

Query: 82  LLAKLLCDQVVGAPIAVSAFYVEWTDVLALCTADQLQPCSCSMENSLRWSLWFSL 136
           L+  + CD+ +  P+ V    + +TDVL          C+ ++ N+L + LWF+L
Sbjct: 47  LMYLIYCDEALHRPMYVFLALLSFTDVLM---------CTSTLPNTL-FILWFNL 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.135    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,684,970
Number of Sequences: 37866
Number of extensions: 210994
Number of successful extensions: 569
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 563
Number of HSP's gapped (non-prelim): 14
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.