Search of human proteins with 190358477

Search of human proteins with 190358477

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190358477 MPV17 mitochondrial membrane protein-like isoform
1 [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1...   410   e-115
gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2...   214   4e-56
gi|29540543 sulfotransferase family, cytosolic, 1A, phenol-prefe...    92   2e-19
gi|4505241 Mpv17 protein [Homo sapiens]                                80   1e-15
gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo s...    72   2e-13
gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]        57   1e-08
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     32   0.45 
gi|13375785 steroid 5 alpha-reductase 3 [Homo sapiens]                 30   1.0  
gi|41393593 aarF domain containing kinase 5 [Homo sapiens]             28   5.0  
gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo...    27   8.5  
gi|148612890 serine-arginine repressor protein [Homo sapiens]          27   8.5  

>gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1
           [Homo sapiens]
          Length = 196

 Score =  410 bits (1053), Expect = e-115
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60
           MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA
Sbjct: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60

Query: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQ 120
           NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQ
Sbjct: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQ 120

Query: 121 KFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQSGDGTFKSAFT 180
           KFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQSGDGTFKSAFT
Sbjct: 121 KFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQSGDGTFKSAFT 180

Query: 181 ILYTKGTSATEGYPKK 196
           ILYTKGTSATEGYPKK
Sbjct: 181 ILYTKGTSATEGYPKK 196


>gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2
           [Homo sapiens]
          Length = 147

 Score =  214 bits (545), Expect = 4e-56
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60
           MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA
Sbjct: 1   MAGWWPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHA 60

Query: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV 103
           NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV
Sbjct: 61  NFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYV 103


>gi|29540543 sulfotransferase family, cytosolic, 1A,
           phenol-preferring, member 1 isoform b [Homo sapiens]
          Length = 217

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 43/46 (93%), Positives = 45/46 (97%)

Query: 82  LLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQKFWNTYL 127
           +LAKLLCDQVVGAPIAVSAFY GMSILQGKDDIFLDLKQKFWNTY+
Sbjct: 1   MLAKLLCDQVVGAPIAVSAFYAGMSILQGKDDIFLDLKQKFWNTYM 46


>gi|4505241 Mpv17 protein [Homo sapiens]
          Length = 176

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 5   WPALSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVVTFHANFNY 64
           W A  RA   HPW   VL  GSL+  GD + Q+L  R       R     +V+    F  
Sbjct: 4   WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63

Query: 65  V----WLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQG--KDDIFLDL 118
                W ++L+R +PG      L K+L DQ   AP  +  F   +  L G    D +  L
Sbjct: 64  PVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKL 123

Query: 119 KQKFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFI 164
           ++ + +  ++    WP VQL NF LVP+ +R A       +W +++
Sbjct: 124 QRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYL 169


>gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo
           sapiens]
          Length = 206

 Score = 72.4 bits (176), Expect = 2e-13
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 19  TNVLLYGSLVSAGDALQQ--RLQGREANWRQTRRVATL--VVTFHANFNYVWLRLLERAL 74
           TN L  G+L++AGD ++Q   ++ R       RR A++  V      F + W   L+R  
Sbjct: 28  TNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASMFAVGCSMGPFLHYWYLSLDRLF 87

Query: 75  PG---RAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKD--DIFLDLKQKFWNTYLSG 129
           P    R    +L K+L DQ+V +P+    +++G+  L+G+   +   +L++KFW  Y + 
Sbjct: 88  PASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQELREKFWEFYKAD 147

Query: 130 LMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICF 166
              WP  Q  NF  VP Q+R  Y       W T++ +
Sbjct: 148 WCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLSY 184


>gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]
          Length = 195

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 9/161 (5%)

Query: 13  RRHPWPTNVLLYGSLVSAGDALQQRLQ-------GREANWRQTRRVATLVVTFHANFNYV 65
           R +P  T     G L + G+ L Q ++        R  +     R A     F    ++ 
Sbjct: 30  RLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHF 89

Query: 66  WLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDLKQK--FW 123
           +   +E  +P   P A L +LL D++V AP  +  F++ M+ L+GKD      K +  FW
Sbjct: 90  FYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFW 149

Query: 124 NTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFI 164
                    W  +Q  N + VP+++R  +A +    W  ++
Sbjct: 150 PALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 58  FHANFNYVWLRLLERALP--------GRAPHALLAKLLCDQVVGAPIAVSAFYVG 104
           FHAN   V L LL  A          GR P    A L  D  +GAP A  AFY G
Sbjct: 354 FHANGTDVCLDLLGAAASLWAKTPNQGRRPPTATAGLRGDTALGAPSAPEAFYAG 408


>gi|13375785 steroid 5 alpha-reductase 3 [Homo sapiens]
          Length = 318

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 80  HALLAKLLCDQVVGAPIAVSAFYVGMSI-LQGKDDIFLDLKQKFWNT-------YLSGLM 131
           H LL  L   Q  G  +A+SAF V + + L     +F  L    ++        Y  GL+
Sbjct: 109 HGLLRILGAAQFQGGELALSAFLVLVFLWLHSLRRLFECLYVSVFSNVMIHVVQYCFGLV 168

Query: 132 YWPFVQLTNFSLVPVQWRTAY 152
           Y+  V LT  S VP+  R AY
Sbjct: 169 YYVLVGLTVLSQVPMDGRNAY 189


>gi|41393593 aarF domain containing kinase 5 [Homo sapiens]
          Length = 580

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 65  VWLRLLERALPGR--APHALLAKLLCDQVVGAPIAVSAFYV 103
           V+ R   R LP R  +P  L  K+L   VVGAP+ + A YV
Sbjct: 27  VFFRRNVRGLPPRFSSPTPLWRKVLSTAVVGAPLLLGARYV 67


>gi|4758412 polypeptide N-acetylgalactosaminyltransferase 2 [Homo
           sapiens]
          Length = 571

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 39  QGREANWRQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAP 95
           Q +   WR      ++V+TFH       LR +   L    PH +   +L D     P
Sbjct: 125 QCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDP 181


>gi|148612890 serine-arginine repressor protein [Homo sapiens]
          Length = 261

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 35  QQRLQGREANW-RQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHA 81
           Q+R + R ++W R  RR  +L  + H  F+Y   +   ++LP R+  A
Sbjct: 117 QRRTRSRSSSWGRNRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSA 164


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,078,127
Number of Sequences: 37866
Number of extensions: 275363
Number of successful extensions: 721
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 707
Number of HSP's gapped (non-prelim): 12
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.