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Search of human proteins with 156151389
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156151389 myc target 1 [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156151389 myc target 1 [Homo sapiens] 473 e-134
gi|169403959 ankyrin repeat domain 53 isoform a [Homo sapiens] 34 0.095
gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 32 0.62
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 32 0.62
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 32 0.62
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 32 0.62
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 32 0.62
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 32 0.62
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 32 0.62
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 32 0.62
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 32 0.62
gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo sapi... 31 0.81
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 31 1.1
gi|56549696 E1A binding protein p400 [Homo sapiens] 30 1.8
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 30 2.3
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 30 2.3
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 30 2.3
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 30 2.3
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 29 3.1
gi|31083344 chemokine orphan receptor 1 [Homo sapiens] 29 3.1
gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens] 29 4.0
gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens] 29 4.0
gi|4885509 neuroblastoma, suppression of tumorigenicity 1 2 prec... 29 4.0
gi|115387106 neuroblastoma, suppression of tumorigenicity 1 1 [H... 29 4.0
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 28 5.2
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 28 5.2
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 28 5.2
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 28 5.2
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 28 5.2
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens] 28 5.2
>gi|156151389 myc target 1 [Homo sapiens]
Length = 235
Score = 473 bits (1217), Expect = e-134
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MRTQVYEGLCKNYFSLAVLQRDRIKLLFFDILVFLSVFLLFLLFLVDIMANNTTSLGSPW 60
MRTQVYEGLCKNYFSLAVLQRDRIKLLFFDILVFLSVFLLFLLFLVDIMANNTTSLGSPW
Sbjct: 1 MRTQVYEGLCKNYFSLAVLQRDRIKLLFFDILVFLSVFLLFLLFLVDIMANNTTSLGSPW 60
Query: 61 PENFWEDLIMSFTVSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSYTHGL 120
PENFWEDLIMSFTVSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSYTHGL
Sbjct: 61 PENFWEDLIMSFTVSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSYTHGL 120
Query: 121 NRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVET 180
NRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVET
Sbjct: 121 NRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVET 180
Query: 181 ESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESIIKAFPDS 235
ESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESIIKAFPDS
Sbjct: 181 ESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESIIKAFPDS 235
>gi|169403959 ankyrin repeat domain 53 isoform a [Homo sapiens]
Length = 530
Score = 34.3 bits (77), Expect = 0.095
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 138 SLASLTFQRQASLEQANSFPRKSSFRASTFHPF----LQCPPLPVETESQLVTLPSSNIS 193
SL S T Q +A+ R+S R+ +FHP LQC P P E + P+
Sbjct: 325 SLVSNTKQARATALSKTPEQRESQ-RSRSFHPSVDARLQCIPQPTEMPKPIYRKPTVKRP 383
Query: 194 PTISTSHSLSRP---DYWSSNSLRVGLSTPPPPAYE--SIIKAFPD 234
+ S++ +RP S +R+G+ P P ++ S ++ PD
Sbjct: 384 TMWNVSNNPARPPTTQISHSQGIRLGVHPDPTPEHDFSSFLEVRPD 429
>gi|188219638 paired box 3 isoform PAX3i [Homo sapiens]
Length = 483
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 254 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 313
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 314 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 370
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 371 PPSGPSNPMNP 381
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 255 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 314
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 315 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 371
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 372 PPSGPSNPMNP 382
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 255 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 314
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 315 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 371
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 372 PPSGPSNPMNP 382
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 255 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 314
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 315 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 371
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 372 PPSGPSNPMNP 382
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 255 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 314
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 315 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 371
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 372 PPSGPSNPMNP 382
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 31.6 bits (70), Expect = 0.62
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASL-TFQRQASLEQA 153
R + A + W S+RR+R G N+ + H ++ +L T+Q + Q
Sbjct: 255 RAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQP 314
Query: 154 NSFPRKSSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTI-STSHSLSRPDYWSSNS 212
S P+ S +ST H PP V +S + + P S+ + + ST H S Y S
Sbjct: 315 TSIPQAVSDPSSTVHRPQPLPPSTVH-QSTIPSNPDSSSAYCLPSTRHGFS--SYTDSFV 371
Query: 213 LRVGLSTPPPP 223
G S P P
Sbjct: 372 PPSGPSNPMNP 382
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 31.6 bits (70), Expect = 0.62
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 138 SLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPV-----ETESQLVTLPSSNI 192
S SLTF + + S P +S ST PP ET S +++I
Sbjct: 59 STPSLTFSITTTKSTSYSPPSFTSSITSTESTSHSTPPFTSSITTNETTSHSTPSFTTSI 118
Query: 193 SPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESI 228
+ T +TSHS P + SSNS+ S PP S+
Sbjct: 119 TKTKTTSHST--PSFTSSNSITDSRSHSTPPFTSSV 152
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 31.6 bits (70), Expect = 0.62
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 19/152 (12%)
Query: 93 LSRRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQ 152
+S R ++ AP+S SSS S +S + + R G R N ++ + + L
Sbjct: 1443 MSVRSKSRAPLSSSSSSASSITSPSSNVTTPNSQRSPGLIYR-NAKKSNTSNEEFKLLLL 1501
Query: 153 ANSFPRKSSFRASTFH----PFLQCPPLPVETESQLVT-------------LPSSNISPT 195
SS+R S P L PP + ES T P S SP
Sbjct: 1502 KKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGSQGAEALSPLSPCSPR 1561
Query: 196 ISTSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
++ + S + +S S RVG S PP A S
Sbjct: 1562 VN-AEGFSSKSFATSASARVGRSRAPPAASSS 1592
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 31.6 bits (70), Expect = 0.62
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 19/152 (12%)
Query: 93 LSRRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQ 152
+S R ++ AP+S SSS S +S + + R G R N ++ + + L
Sbjct: 1287 MSVRSKSRAPLSSSSSSASSITSPSSNVTTPNSQRSPGLIYR-NAKKSNTSNEEFKLLLL 1345
Query: 153 ANSFPRKSSFRASTFH----PFLQCPPLPVETESQLVT-------------LPSSNISPT 195
SS+R S P L PP + ES T P S SP
Sbjct: 1346 KKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGSQGAEALSPLSPCSPR 1405
Query: 196 ISTSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
++ + S + +S S RVG S PP A S
Sbjct: 1406 VN-AEGFSSKSFATSASARVGRSRAPPAASSS 1436
>gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo
sapiens]
Length = 440
Score = 31.2 bits (69), Expect = 0.81
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Query: 170 FLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
FL CP P E ++ L SP++ TSHS RP SL+ L P PP +S
Sbjct: 334 FLPCPRCPRERQASLA-------SPSLRTSHSGPRPGL----SLQQVLPLPLPPDSDS 380
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo
sapiens]
Length = 1792
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 95 RRRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQAN 154
RRR S S +S S SRSSYT+ +R+G R R S + S ++
Sbjct: 679 RRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSR-------SFSRSHSRSYSRSP 731
Query: 155 SFPRKSSFRASTF 167
+PR+ ++ +
Sbjct: 732 PYPRRGRGKSRNY 744
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 30.0 bits (66), Expect = 1.8
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 147 QASLEQANSFPRKSSFRASTFHPFLQCP-PLPVETESQLVTLPSSNISPTISTSHSLSRP 205
Q Q +S P+ + P CP PLP + S L + S P+ + S ++RP
Sbjct: 631 QVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARSSPVNRP 690
Query: 206 DYWSSNSLRVGLSTPP 221
++ +L S P
Sbjct: 691 SSATNKALSPVTSRTP 706
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 29.6 bits (65), Expect = 2.3
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 100 SAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRK 159
++ I+ ++ +S S+T + TG HS S+++ T S+ + + ++
Sbjct: 107 TSSITTTETTSQSSPSFTSLITITGSTSHSTASFTSSITTTETTSHSTRSITSSITTTKR 166
Query: 160 SSFRASTFHPFLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLST 219
+S + ++ + ET S V +S I+ T STSH S P S+ + S
Sbjct: 167 TSHSSLSYTSSIATS----ETPSHTVPSFTSLITTTESTSH--SNPSLTSAITTTETRSH 220
Query: 220 PPPPAYESI 228
PP SI
Sbjct: 221 SPPIFTSSI 229
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 172 QCPPLPVETESQLVTLPSSNISPTIS-TSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
Q PP P + + +P I+ SH R Y SS++ ++ PP P+Y++
Sbjct: 1428 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQT 1484
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 172 QCPPLPVETESQLVTLPSSNISPTIS-TSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
Q PP P + + +P I+ SH R Y SS++ ++ PP P+Y++
Sbjct: 1468 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQT 1524
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 172 QCPPLPVETESQLVTLPSSNISPTIS-TSHSLSRPDYWSSNSLRVGLSTPPPPAYES 227
Q PP P + + +P I+ SH R Y SS++ ++ PP P+Y++
Sbjct: 1415 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQT 1471
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 29.3 bits (64), Expect = 3.1
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
Query: 96 RRRASAPISQWSSSRRSRSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLE-QAN 154
RR+ + S+R +R+ R+ +SGC+ N S SL+ A E Q
Sbjct: 311 RRKPAMTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGN-SNPSLSVPSSAESEKQTR 369
Query: 155 SFPRKSSFRASTFHPFLQ--------CPPLPVETESQLVTLPSSNISPTISTSHSLSRPD 206
P++ S R P L+ P +S S+ SP + H +PD
Sbjct: 370 QAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSPVLEKEH---QPD 426
Query: 207 YWSSN 211
SSN
Sbjct: 427 VDSSN 431
>gi|31083344 chemokine orphan receptor 1 [Homo sapiens]
Length = 362
Score = 29.3 bits (64), Expect = 3.1
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 13 YFSLAVLQRDRIKLLFFDILVFLSVFLLFL-----LFLVDIMANNTTSLGSPWPENFWED 67
YF+ R ++ ILV+L F + L L V +NN T S +PE+ ++
Sbjct: 148 YFTNTPSSRKKMVRRVVCILVWLLAFCVSLPDTYYLKTVTSASNNETYCRSFYPEHSIKE 207
Query: 68 LIMSFT-VSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSY 116
++ VS+ +G + I AVF L R +++ + SSR+ SY
Sbjct: 208 WLIGMELVSVVLGFAVPFSIIAVFYFLLARAISASSDQEKHSSRKIIFSY 257
>gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens]
Length = 904
Score = 28.9 bits (63), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 169 PFLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDY 207
P + P+P E L T+P +N P + + SL P Y
Sbjct: 174 PVIPVLPVPAENTVILPTIPQANPPPVLVNTDSLETPTY 212
>gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens]
Length = 926
Score = 28.9 bits (63), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 169 PFLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDY 207
P + P+P E L T+P +N P + + SL P Y
Sbjct: 174 PVIPVLPVPAENTVILPTIPQANPPPVLVNTDSLETPTY 212
>gi|4885509 neuroblastoma, suppression of tumorigenicity 1 2
precursor [Homo sapiens]
Length = 180
Score = 28.9 bits (63), Expect = 4.0
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 113 RSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQ 172
+S++ N T HSGCE +S Q +A L Q S+ ++F ST +
Sbjct: 30 KSAWCEAKNITQIVGHSGCEAKS--------IQNRACLGQCFSYSVPNTFPQST-ESLVH 80
Query: 173 CPP-LPVETESQLVTL 187
C +P ++ ++VTL
Sbjct: 81 CDSCMPAQSMWEIVTL 96
>gi|115387106 neuroblastoma, suppression of tumorigenicity 1 1 [Homo
sapiens]
Length = 216
Score = 28.9 bits (63), Expect = 4.0
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 113 RSSYTHGLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQ 172
+S++ N T HSGCE +S Q +A L Q S+ ++F ST +
Sbjct: 66 KSAWCEAKNITQIVGHSGCEAKS--------IQNRACLGQCFSYSVPNTFPQST-ESLVH 116
Query: 173 CPP-LPVETESQLVTL 187
C +P ++ ++VTL
Sbjct: 117 CDSCMPAQSMWEIVTL 132
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 28.5 bits (62), Expect = 5.2
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 170 FLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWS------------SNSLRVGL 217
F + PLP T S L +PS+ S+SHS P +WS LR+G
Sbjct: 237 FTRTRPLP-RTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR 295
Query: 218 STPP 221
+PP
Sbjct: 296 LSPP 299
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 28.5 bits (62), Expect = 5.2
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 170 FLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWS------------SNSLRVGL 217
F + PLP T S L +PS+ S+SHS P +WS LR+G
Sbjct: 237 FTRTRPLP-RTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR 295
Query: 218 STPP 221
+PP
Sbjct: 296 LSPP 299
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 28.5 bits (62), Expect = 5.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 169 PFLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESI 228
P PL + L LPSS SP+ S+S S S P S+S + PPP S
Sbjct: 155 PLFLLLPLFLPLFIPLFLLPSS--SPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212
Query: 229 IKAFP 233
+FP
Sbjct: 213 SSSFP 217
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 28.5 bits (62), Expect = 5.2
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 170 FLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWS------------SNSLRVGL 217
F + PLP T S L +PS+ S+SHS P +WS LR+G
Sbjct: 237 FTRTRPLP-RTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR 295
Query: 218 STPP 221
+PP
Sbjct: 296 LSPP 299
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 28.5 bits (62), Expect = 5.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 169 PFLQCPPLPVETESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESI 228
P PL + L LPSS SP+ S+S S S P S+S + PPP S
Sbjct: 155 PLFLLLPLFLPLFIPLFLLPSS--SPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212
Query: 229 IKAFP 233
+FP
Sbjct: 213 SSSFP 217
>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
Length = 1302
Score = 28.5 bits (62), Expect = 5.2
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 138 SLASLTFQRQASLEQANSFPRKSSFRA-STFHPFLQCPPLPVETESQLVTLPSSNISPTI 196
S+AS +SL +++ P S + + P L P SQL +PS+ +SP
Sbjct: 259 SVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPS---RAASQLA-VPSTPLSPHS 314
Query: 197 STSHSL-----SRPDY--------WSSNSLRVGLSTPPPPAYESIIKAFPDS 235
+ S + S P Y W+S+ + + S+P PPA S +A P S
Sbjct: 315 AASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPAS 366
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,168,087
Number of Sequences: 37866
Number of extensions: 378060
Number of successful extensions: 2020
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1982
Number of HSP's gapped (non-prelim): 59
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.