Guide to the Human Genome
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Name: MYCT1 Sequence: fasta or formatted (235aa) NCBI GI: 156151389
Description:

myc target 1

Referenced in:

Stomach, Small Intestine, and Colon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         12           1
 C cysteine            1.7          4           1
 D aspartate           2.6          6           1
 E glutamate           3.4          8           1
 F phenylalanine       7.7         18           2
 G glycine             3.8          9           2
 H histidine           1.7          4           1
 I isoleucine          5.1         12           2
 K lysine              1.7          4           1
 L leucine            12.3         29           2
 M methionine          1.7          4           1
 N asparagine          3.8          9           2
 P proline             6.8         16           4
 Q glutamine           3.4          8           1
 R arginine            8.1         19           4
 S serine             16.2         38           3
 T threonine           5.5         13           2
 V valine              4.7         11           1
 W tryptophan          2.1          5           1
 Y tyrosine            2.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myc target 1 
ANKRD53               0.020   ankyrin repeat domain 53 isoform a 
PAX3                  0.016   paired box 3 isoform PAX3i 
PAX3                  0.016   paired box 3 isoform PAX3g 
PAX3                  0.016   paired box 3 isoform PAX3h 
PAX3                  0.016   paired box 3 isoform PAX3e 
PAX3                  0.016   paired box 3 isoform PAX3d 
PAX3                  0.016   paired box 3 isoform PAX3 
MUC3B                 0.016   PREDICTED: mucin 3B, cell surface associated, parti...
NHS                   0.016   Nance-Horan syndrome protein isoform 1 
NHS                   0.016   Nance-Horan syndrome protein isoform 2 
HTR6                  0.013   5-hydroxytryptamine (serotonin) receptor 6 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 1 
EP400                 0.011   E1A binding protein p400 
LOC100134138          0.011   PREDICTED: similar to mucin, partial 
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SFRS2IP               0.009   splicing factor, arginine/serine-rich 2, interactin...
CXCR7                 0.009   chemokine orphan receptor 1 
DLG1                  0.009   discs, large homolog 1 isoform 1 
DLG1                  0.009   discs, large homolog 1 isoform 2 
NBL1                  0.009   neuroblastoma, suppression of tumorigenicity 1 2 prec...
NBL1                  0.009   neuroblastoma, suppression of tumorigenicity 1 1 [H...
LOC645602             0.007   PREDICTED: hypothetical protein 
LOC645602             0.007   PREDICTED: hypothetical protein 
LOC100288635          0.007   PREDICTED: hypothetical protein 
LOC645602             0.007   PREDICTED: hypothetical protein 
LOC100288635          0.007   PREDICTED: hypothetical protein XP_002343184 
UBE4B                 0.007   ubiquitination factor E4B isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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