Search of human proteins with 169208304

Search of human proteins with 169208304

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169208304 PREDICTED: hypothetical protein [Homo sapiens]
         (49 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169208304 PREDICTED: hypothetical protein [Homo sapiens]           110   3e-25
gi|169208488 PREDICTED: hypothetical protein [Homo sapiens]           110   3e-25

>gi|169208304 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 49

 Score =  110 bits (274), Expect = 3e-25
 Identities = 49/49 (100%), Positives = 49/49 (100%)

Query: 1  MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA 49
          MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA
Sbjct: 1  MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA 49


>gi|169208488 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 150

 Score =  110 bits (274), Expect = 3e-25
 Identities = 49/49 (100%), Positives = 49/49 (100%)

Query: 1   MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA 49
           MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA
Sbjct: 102 MLQWSVSCGGGSWFLWKIEANNFSLALNPHTDILLSPLAGGARKHQPCA 150


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,340,149
Number of Sequences: 37866
Number of extensions: 66344
Number of successful extensions: 106
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 2
length of query: 49
length of database: 18,247,518
effective HSP length: 23
effective length of query: 26
effective length of database: 17,376,600
effective search space: 451791600
effective search space used: 451791600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.